Miyakogusa Predicted Gene

Lj2g3v1172580.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1172580.3 Non Characterized Hit- tr|J3N0F1|J3N0F1_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB09G2,34.17,3e-18,seg,NULL; coiled-coil,NULL,CUFF.36377.3
         (235 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g053260.1 | hypothetical protein | HC | chr5:21950015-2195...   360   e-100
Medtr6g053740.1 | oxidoreductase/transition metal ion-binding pr...    93   2e-19

>Medtr5g053260.1 | hypothetical protein | HC |
           chr5:21950015-21957569 | 20130731
          Length = 545

 Score =  360 bits (925), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 182/235 (77%), Positives = 202/235 (85%)

Query: 1   MDVKEITSLAVYVDILAGDRSILRKVFGQSKRLQPNKPATKAQAAVALTSGRMMEAISAE 60
           MDVKEITS  VY+D+LAGD SILRKVFGQSKR QPNKP+T AQAAVALTSGRM EAISAE
Sbjct: 311 MDVKEITSQGVYLDMLAGDGSILRKVFGQSKRFQPNKPSTIAQAAVALTSGRMKEAISAE 370

Query: 61  LLRIEAENSARQAAAEEIRSELLSRGDIQKFWDLKLSEEKSRGFDAERLYLDAVNNLEEE 120
           + R+EAENSARQ   EEIRSELLSRGDIQKFWD K+SEEKS G D ERLYL+AVNNL EE
Sbjct: 371 MSRLEAENSARQDETEEIRSELLSRGDIQKFWDAKISEEKSHGSDVERLYLEAVNNLVEE 430

Query: 121 TINQDKIHAEYLKEKEAMDCQKQLLLTLKKEVDEISEKLASERVIYVDEKQIVHKLLKDL 180
            INQ+KI+A++LKE+ AM CQKQ+LL+LK+EVDEISEKLA ERVIYVDEKQ V KLL+DL
Sbjct: 431 KINQEKINADFLKEQAAMACQKQMLLSLKEEVDEISEKLALERVIYVDEKQTVQKLLRDL 490

Query: 181 EFKHEEMLDTKSTLEAEKEALQILRSWVEDEARRSQXXXXXXXXXXXXWKWDDQA 235
           EFKHE++LDTKSTLEAEKEALQ+LR+WVEDEARRSQ            WKWDDQA
Sbjct: 491 EFKHEKILDTKSTLEAEKEALQMLRTWVEDEARRSQARAAVLAEVGRRWKWDDQA 545


>Medtr6g053740.1 | oxidoreductase/transition metal ion-binding
           protein, putative | HC | chr6:19392109-19383729 |
           20130731
          Length = 957

 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 119/207 (57%), Gaps = 4/207 (1%)

Query: 10  AVYVDILAGDRSILRKVFGQSKRLQPNKPATKAQAAVALTSGRMMEAISAELLRIEAENS 69
           A+  D+ +G++ I+   FG ++  QP+KP TKAQAA+AL +G   + +S EL RIEAE+ 
Sbjct: 595 ALVADLSSGEQGIISLAFGYTRLFQPDKPVTKAQAAIALATGDASDIVSEELARIEAESI 654

Query: 70  ARQAAAEEIRSELLSR--GDIQKFWDLKLSEEKSRGFDAERLYLDAVNNLEEETINQDKI 127
           A  A A    S L+++   DI   ++ +L  E+ +    E++  +A + LE   + +++ 
Sbjct: 655 AENAVA--AHSALVAQVERDINAGYEQELLLEREKINAIEKMAEEAKHELETLRVQREED 712

Query: 128 HAEYLKEKEAMDCQKQLLLTLKKEVDEISEKLASERVIYVDEKQIVHKLLKDLEFKHEEM 187
                KE+ A++ + ++   L+ EV +  + L S +V    EK+ + KL +  E ++ E+
Sbjct: 713 SITLEKERAAIESEMEVFSKLRNEVQDQLQSLMSNKVEIAYEKERIKKLREQAEVENNEI 772

Query: 188 LDTKSTLEAEKEALQILRSWVEDEARR 214
              +  LE E++AL + R+W EDEA+R
Sbjct: 773 TRLQYDLEVERKALSMARTWAEDEAKR 799