Miyakogusa Predicted Gene

Lj2g3v1172530.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1172530.1 Non Characterized Hit- tr|B6U4U3|B6U4U3_MAIZE
Putative uncharacterized protein OS=Zea mays PE=4 SV=1,81.82,5e-17,no
description,NULL; ARSENICAL PUMP-DRIVING ATPASE
(ARSENITE-TRANSLOCATING ATPASE),NULL; ARSENICAL
P,NODE_88772_length_1684_cov_13.589667.path1.1
         (449 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g053280.1 | P-loop nucleoside triphosphate hydrolase super...   598   e-171

>Medtr5g053280.1 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | chr5:21972012-21968063 |
           20130731
          Length = 440

 Score =  598 bits (1541), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 303/439 (69%), Positives = 337/439 (76%), Gaps = 5/439 (1%)

Query: 12  SASSFSFPLLIGTXXXXXXXXXXXXXXXXXXXVASSSEPPTKLLTFLGKGGSGKTTAAIF 71
           S SSF+FP+L  +                      +S   TKLLTFLGKGGSGKTTAAIF
Sbjct: 4   SISSFTFPVLCRSTSVRTKPLMAVASSSSSSSEDVAS---TKLLTFLGKGGSGKTTAAIF 60

Query: 72  AAQHYALAGLNTCLVLHGQDTTAEYLLDCKIGTSHVVCSKNLSAVRLETTKMLLEPLKLL 131
           AAQH+A+AGLNTCLV+H QD TA+YLL+CKIGTS+V CSKNLSAVRLETTKMLLEPLKLL
Sbjct: 61  AAQHFAMAGLNTCLVIHSQDITADYLLNCKIGTSYVECSKNLSAVRLETTKMLLEPLKLL 120

Query: 132 KQADAQLNLTQXXXXXXXXXXXXXXXXMDSIFSVLALEKQVGFLGTAASKRQQDKFDLIV 191
           KQADAQLN+TQ                MDSIFSVLALE+ VGFLG  +SK +QDKFD+I+
Sbjct: 121 KQADAQLNMTQGTLGGIVGEELGILPGMDSIFSVLALERLVGFLGMPSSKSEQDKFDVII 180

Query: 192 YDGISSEETLRFIGGSSKARLYLKYLRTLAEKTELGRLAAPSLLRLVDEAVKISSSRSYF 251
           YDG+SSEETLR +GGSSKARLYLKY+RTLAEKTE+GRLAAPSLLRLVDEA+KI+SSRSYF
Sbjct: 181 YDGVSSEETLRIMGGSSKARLYLKYIRTLAEKTEIGRLAAPSLLRLVDEAMKINSSRSYF 240

Query: 252 NGRGSSETWDNLDQLLERGSSAFSNPQRFGCFLVMDPNNPTSVNSALRYWGCAIQAGAQV 311
           NGR SSETWD LDQLLE+GSSAFSNPQ+FGC LVMDPNNPTSVNSA RYWGCAIQAGAQV
Sbjct: 241 NGRMSSETWDTLDQLLEKGSSAFSNPQKFGCLLVMDPNNPTSVNSASRYWGCAIQAGAQV 300

Query: 312 SGAFGV--RQKNIESLDRVKKDFXXXXXXXXXXXXXXXXXDWSRVLVDTINEDARHXXXX 369
           SGAFG+  +Q   ES +R KKD                  DW++VL+DT+N+DAR     
Sbjct: 301 SGAFGISSQQPKAESFERAKKDLSPLPSAFISSPLVNSPIDWNKVLLDTVNKDARQFLTS 360

Query: 370 XXXXXXXXXXXVKFDIKRKSVTLFMPGFDKSEIKLYQYRGGSELLVEAGDQRRVIALPPG 429
                      VKFD+ RKSVTLFMPGFDKSEIKLYQYRGGSELLVEAGDQRRVI LP  
Sbjct: 361 LSSQSSNMTSSVKFDVIRKSVTLFMPGFDKSEIKLYQYRGGSELLVEAGDQRRVIPLPQE 420

Query: 430 IQGKVGGAKFGDRSLVVTL 448
           IQGKVGGAKF DRSLV+TL
Sbjct: 421 IQGKVGGAKFQDRSLVITL 439