Miyakogusa Predicted Gene

Lj2g3v1172490.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1172490.1 Non Characterized Hit- tr|I3SEL7|I3SEL7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.39,0,coiled-coil,NULL; DUF572,CWC16 protein; SUBFAMILY NOT
NAMED,NULL; CELL CYCLE CONTROL PROTEIN CWF16-R,CUFF.36374.1
         (310 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g093770.1 | coiled-coil protein | HC | chr1:42080139-42076...   496   e-140
Medtr2g070740.1 | coiled-coil protein | HC | chr2:29824496-29819...    88   9e-18
Medtr8g008730.1 | coiled-coil protein | HC | chr8:1835765-184384...    87   2e-17
Medtr8g008730.2 | coiled-coil protein | HC | chr8:1835765-184262...    86   3e-17
Medtr3g101280.1 | DUF572 family protein | HC | chr3:46594322-465...    83   3e-16
Medtr1g073720.1 | coiled-coil protein | HC | chr1:32716787-32717...    79   5e-15

>Medtr1g093770.1 | coiled-coil protein | HC | chr1:42080139-42076240
           | 20130731
          Length = 312

 Score =  496 bits (1277), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 242/311 (77%), Positives = 258/311 (82%), Gaps = 2/311 (0%)

Query: 1   MSSLAAARADNFYYPPEWDPSQGSLNNFHGQHALRERARKLDQGILIIRFEMPFNIWCGG 60
           MSSLAAARADNFY+PPEWDPSQGSLN FHGQHALRERARKLDQGILIIRFEMP+NIWCGG
Sbjct: 1   MSSLAAARADNFYFPPEWDPSQGSLNKFHGQHALRERARKLDQGILIIRFEMPYNIWCGG 60

Query: 61  CNSMIGKGVRFNAEKKQVGNYYSTKIWSFTMKSACCRHEIVIQTDPKNCEYVIISGAQKK 120
           CNSMI KGVRFNAEKKQVGNYYSTKIWSFTMK+ACCR EI IQTDPKNCEYVII GAQKK
Sbjct: 61  CNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKAACCRQEITIQTDPKNCEYVIIGGAQKK 120

Query: 121 TEDYDVEDAEVLELATNEERSLLADPFYRLEHGEEDLKKKKEAEPVLVRLQRLSDTRHSD 180
           TED+DVEDAE  EL  +EER  LADPFYRLEH EEDLKKKK+AEPVLVRLQR+SD RHSD
Sbjct: 121 TEDFDVEDAETFELPADEERGKLADPFYRLEHQEEDLKKKKQAEPVLVRLQRMSDARHSD 180

Query: 181 DYALNKSLRAQLRSQKKRVAEEETASRKRGLGIRLLPATEQDAATAKQVKFLTKFDKNRK 240
           DYALNKSLRA+LRSQKKRVAEEE ASRKRGLGIRLLPA++QDAA A +VKF +KFD+NRK
Sbjct: 181 DYALNKSLRAKLRSQKKRVAEEEAASRKRGLGIRLLPASDQDAAAAAKVKFSSKFDRNRK 240

Query: 241 DKRALINXXXX--XXXXXXXXDXXXXXXXXXXXXISATAASSLLTGGLKPSSWSQGTIPS 298
           DKRALIN                           ISA+ ASSLL GG KPSSWSQG +  
Sbjct: 241 DKRALINAAPIFPGLSVSSMSGKRRLELESKRRKISASTASSLLAGGYKPSSWSQGAVLP 300

Query: 299 SRQKGASMTVR 309
            RQKGAS+  R
Sbjct: 301 GRQKGASVNAR 311


>Medtr2g070740.1 | coiled-coil protein | HC | chr2:29824496-29819955
           | 20130731
          Length = 327

 Score = 88.2 bits (217), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 101/200 (50%), Gaps = 19/200 (9%)

Query: 11  NFYYPPEWDPSQGSLNNFHGQHALRERARKLDQGILIIRFEMPFNIWCGGCNSMIGKGVR 70
           N YYPP++DP++              R R+     + +R  +P +I C  C + I KG +
Sbjct: 8   NKYYPPDFDPAK------------LPRVRRPKNLQIKVRMMLPMSIRCNTCGNYIYKGTK 55

Query: 71  FNAEKKQV--GNYYSTKIWSFTMKSACCRHEIVIQTDPKNCEYVIISGAQKKTEDYDVED 128
           FN+ K+ V    Y   +I+ F  K   C  E+ ++TDP+N +YV+ SGA +  E +  ED
Sbjct: 56  FNSRKEDVIGETYLGIQIFRFYFKCTRCSAELTMKTDPQNSDYVVESGATRNFEPWRAED 115

Query: 129 AEVLELATNEERSLLADPFYRLEHGEEDLKKKKEAEPVLVRLQRLSDTRHSDDYALNKSL 188
            E  E+    E   + D    LE+   D K++ +    L  ++ +  +RH+   ++++ L
Sbjct: 116 EETDEMKKKRETEEMGDAMKSLENRTLDSKREMDILAALDEMKSMK-SRHA-TVSVDEML 173

Query: 189 RAQLRS---QKKRVAEEETA 205
            A  R+   ++KR+ EE+ A
Sbjct: 174 AALQRTAADKEKRIEEEDEA 193


>Medtr8g008730.1 | coiled-coil protein | HC | chr8:1835765-1843840 |
           20130731
          Length = 323

 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 101/200 (50%), Gaps = 19/200 (9%)

Query: 11  NFYYPPEWDPSQGSLNNFHGQHALRERARKLDQGILIIRFEMPFNIWCGGCNSMIGKGVR 70
           N YYPP++DP++              R R+ +   + +R  +P +I C  C + I KG +
Sbjct: 8   NKYYPPDFDPAKLP------------RVRRPENLQINVRMMLPMSIRCNTCGNYIYKGTK 55

Query: 71  FNAEKKQV--GNYYSTKIWSFTMKSACCRHEIVIQTDPKNCEYVIISGAQKKTEDYDVED 128
           FN+ K+ V    Y   +I+ F  K   C  E+ ++TDP+N +YV+ SGA +  E +  ED
Sbjct: 56  FNSRKEDVIGETYLGIQIFRFYFKCTRCSAELTMKTDPQNSDYVVESGATRNFEPWRAED 115

Query: 129 AEVLELATNEERSLLADPFYRLEHGEEDLKKKKEAEPVLVRLQRLSDTRHSDDYALNKSL 188
            E  E+    E   + D    LE+   D K++ +    L  ++ +  +RH+   ++ + L
Sbjct: 116 EETDEMKKKREAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMK-SRHA-TVSVAEML 173

Query: 189 RAQLRS---QKKRVAEEETA 205
            A  R+   ++KR+ EE+ A
Sbjct: 174 VALQRTAADKEKRIEEEDEA 193


>Medtr8g008730.2 | coiled-coil protein | HC | chr8:1835765-1842629 |
           20130731
          Length = 248

 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 101/200 (50%), Gaps = 19/200 (9%)

Query: 11  NFYYPPEWDPSQGSLNNFHGQHALRERARKLDQGILIIRFEMPFNIWCGGCNSMIGKGVR 70
           N YYPP++DP++              R R+ +   + +R  +P +I C  C + I KG +
Sbjct: 8   NKYYPPDFDPAKLP------------RVRRPENLQINVRMMLPMSIRCNTCGNYIYKGTK 55

Query: 71  FNAEKKQV--GNYYSTKIWSFTMKSACCRHEIVIQTDPKNCEYVIISGAQKKTEDYDVED 128
           FN+ K+ V    Y   +I+ F  K   C  E+ ++TDP+N +YV+ SGA +  E +  ED
Sbjct: 56  FNSRKEDVIGETYLGIQIFRFYFKCTRCSAELTMKTDPQNSDYVVESGATRNFEPWRAED 115

Query: 129 AEVLELATNEERSLLADPFYRLEHGEEDLKKKKEAEPVLVRLQRLSDTRHSDDYALNKSL 188
            E  E+    E   + D    LE+   D K++ +    L  ++ +  +RH+   ++ + L
Sbjct: 116 EETDEMKKKREAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMK-SRHA-TVSVAEML 173

Query: 189 RAQLRS---QKKRVAEEETA 205
            A  R+   ++KR+ EE+ A
Sbjct: 174 VALQRTAADKEKRIEEEDEA 193


>Medtr3g101280.1 | DUF572 family protein | HC |
          chr3:46594322-46591914 | 20130731
          Length = 199

 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 36/54 (66%), Positives = 41/54 (75%), Gaps = 5/54 (9%)

Query: 32 HALRERARKLDQGILIIRFEMPFNIWCGGCNSMIGKGVRFNAEKKQVGNYYSTK 85
          H  R+++ K       +RFEMP+NIWCGGCNS   KGVRFNAEKKQVGNYYSTK
Sbjct: 51 HESRQKSSKT-----FVRFEMPYNIWCGGCNSTTAKGVRFNAEKKQVGNYYSTK 99


>Medtr1g073720.1 | coiled-coil protein | HC | chr1:32716787-32717732
           | 20130731
          Length = 298

 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 96/200 (48%), Gaps = 21/200 (10%)

Query: 11  NFYYPPEWDPSQGSLNNFHGQHALRERARKLDQGILIIRFEMPFNIWCGGCNSMIGKGVR 70
           N YYPP++DP++              R +K  Q  + +R  +   I C  C + + KG +
Sbjct: 8   NKYYPPDFDPAK------------LPRGKKTKQ--IPVRHMLSMTIRCNTCGNFMYKGTK 53

Query: 71  FNAEKKQVG--NYYSTKIWSFTMKSACCRHEIVIQTDPKNCEYVIISGAQKKTEDYDVED 128
            N+ K+ V    Y   +I+ F  K  CC  E  ++TDP+N +YV+  GA +  E +  ED
Sbjct: 54  LNSRKEVVEGETYLGIQIFRFYGKCTCCSAEYTMKTDPRNSDYVVEFGATRNFEPWRAED 113

Query: 129 AEVLELATNEERSLLADPFYRLEHGEEDLKKKKEAEPVLVRLQRLSDTRHSDDYALNKSL 188
            E  E     E   + D    LE+   D K++ +    L  ++ +  +RH+   +++K L
Sbjct: 114 KESDERKKKREAEEIGDAMKSLENKTLDSKREMDILAALDEMKSMK-SRHA-TVSVDKML 171

Query: 189 RAQLR---SQKKRVAEEETA 205
            A  R    ++KR+ EE+ A
Sbjct: 172 AALQRKAADKEKRLVEEDEA 191