Miyakogusa Predicted Gene

Lj2g3v1168860.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1168860.1 tr|G7JYA5|G7JYA5_MEDTR Zinc finger-like protein
OS=Medicago truncatula GN=MTR_5g054090 PE=4 SV=1,79.37,0,zinc
finger,Zinc finger, C2H2-like; seg,NULL; AZ2-RELATED,NULL; ZINC FINGER
PROTEIN,NULL; C2H2 and C,CUFF.36347.1
         (304 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g093095.1 | C2H2-type zinc finger protein | HC | chr1:4193...   332   2e-91
Medtr4g059870.1 | C2H2 and C2HC zinc finger protein, putative | ...    95   7e-20
Medtr1g094115.1 | C2H2 zinc finger protein, putative | HC | chr1...    94   1e-19
Medtr1g094115.2 | C2H2 zinc finger protein, putative | HC | chr1...    94   1e-19
Medtr8g017210.1 | C2H2-like zinc finger protein, putative | HC |...    94   2e-19
Medtr1g016010.1 | C2H2-type zinc finger protein | HC | chr1:4158...    94   2e-19
Medtr2g099990.1 | C2H2-type zinc finger protein | HC | chr2:4289...    93   4e-19
Medtr1g112270.2 | C2H2 zinc finger protein, putative | HC | chr1...    92   7e-19
Medtr1g112270.1 | C2H2 zinc finger protein, putative | HC | chr1...    92   8e-19
Medtr2g093960.1 | C2H2-type zinc finger protein | LC | chr2:4003...    92   8e-19
Medtr2g099990.2 | C2H2-type zinc finger protein | HC | chr2:4289...    89   4e-18
Medtr2g090745.1 | C2H2-like zinc finger protein, putative | HC |...    89   4e-18
Medtr2g017720.1 | F-box associated protein | LC | chr2:5437660-5...    59   5e-09

>Medtr1g093095.1 | C2H2-type zinc finger protein | HC |
           chr1:41939075-41940250 | 20130731
          Length = 294

 Score =  332 bits (851), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 171/251 (68%), Positives = 189/251 (75%), Gaps = 20/251 (7%)

Query: 21  DEASISLSLGPPGQHNPKIPSSKHPATT-----LHHQQNPTSDDDHSGVTVALHIGLPTN 75
           DE SI LSL PPG   P   +  HP  +     LH     T+   H   T A+++ L   
Sbjct: 23  DEDSIFLSLAPPGHQIPPKLTPPHPTISTTIPPLHQIPISTTTSLHHHHTCAVNVALNAL 82

Query: 76  ISPTTDTTPISKPDHNQHHHLASSAPVQGQYWIPSPAQILIGPTQFSCTVCNKMFNRYNN 135
           I+PT      SKP H          P+  QYWIPSPAQIL+GPTQFSCTVCNK FNR+NN
Sbjct: 83  INPTF----TSKPSH---------TPIIPQYWIPSPAQILVGPTQFSCTVCNKTFNRFNN 129

Query: 136 MQMHMWGHGSQYRKGPESLRGAKPASS--MLRLPCYCCAEGCKNNIDHPRSRPLKDFRTL 193
           MQMHMWGHGSQYRKGPESL+G KPASS  ML+LPCYCCAEGC+NNI++PR+RPLKDFRTL
Sbjct: 130 MQMHMWGHGSQYRKGPESLKGPKPASSSSMLKLPCYCCAEGCRNNINYPRARPLKDFRTL 189

Query: 194 QTHYKRKHGAKPFGCRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAF 253
           QTHYKRKHG K F CRKC K FAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAF
Sbjct: 190 QTHYKRKHGGKSFECRKCRKTFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAF 249

Query: 254 GDGHAPHTVES 264
           G+GHAPHT+ES
Sbjct: 250 GNGHAPHTLES 260


>Medtr4g059870.1 | C2H2 and C2HC zinc finger protein, putative | HC
           | chr4:22086566-22083892 | 20130731
          Length = 495

 Score = 95.1 bits (235), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 73/143 (51%), Gaps = 10/143 (6%)

Query: 115 LIGPTQFSCTVCNKMFNRYNNMQMHMWGHGSQYRKGPESLRGAKPASSMLRLPCYCCAEG 174
           L+   +F C +CNK F R  N+Q+H  GH       P  L+  +     +R   Y C E 
Sbjct: 61  LMATNRFLCEICNKGFQRDQNLQLHRRGHNL-----PWKLK-QRANKDQIRKKVYVCPE- 113

Query: 175 CKNNIDHPRSRPLKDFRTLQTHYKRKHGAKPFGCRKCGKPFAVRGDWRTHEKNCG-KLWF 233
            K  + H  SR L D   ++ HY RKHG K + C KC K +AV+ DW+ H K CG + + 
Sbjct: 114 -KTCVHHEPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTREYK 172

Query: 234 CICGSDFKHKRSLKDHVRAFGDG 256
           C CG+ F  K S   H RAF D 
Sbjct: 173 CDCGTIFSRKDSFITH-RAFCDA 194


>Medtr1g094115.1 | C2H2 zinc finger protein, putative | HC |
           chr1:42286195-42289752 | 20130731
          Length = 522

 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 77/147 (52%), Gaps = 13/147 (8%)

Query: 118 PTQFSCTVCNKMFNRYNNMQMHMWGHGSQYRKGPESLRGAKPASSMLRLPCYCCAE-GCK 176
           P++F C VCNK F R  N+Q+H  GH   ++   +S    +P     R   Y C E  C 
Sbjct: 56  PSKFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKS--NKEP-----RRKVYLCPEPTC- 107

Query: 177 NNIDHPRSRPLKDFRTLQTHYKRKHGAKPFGCRKCGKPFAVRGDWRTHEKNCG-KLWFCI 235
             + H  SR L D   ++ H+ RKHG K + C KC K +AV+ DW+ H K CG + + C 
Sbjct: 108 --VHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYRCD 165

Query: 236 CGSDFKHKRSLKDHVRAFGDGHAPHTV 262
           CG+ F  + S   H RAF D  A  +V
Sbjct: 166 CGTLFSRRDSFITH-RAFCDALAQESV 191


>Medtr1g094115.2 | C2H2 zinc finger protein, putative | HC |
           chr1:42286106-42289867 | 20130731
          Length = 539

 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/152 (36%), Positives = 78/152 (51%), Gaps = 13/152 (8%)

Query: 113 QILIGPTQFSCTVCNKMFNRYNNMQMHMWGHGSQYRKGPESLRGAKPASSMLRLPCYCCA 172
           + L+   +F C VCNK F R  N+Q+H  GH   ++   +S    +P     R   Y C 
Sbjct: 68  KTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKS--NKEP-----RRKVYLCP 120

Query: 173 E-GCKNNIDHPRSRPLKDFRTLQTHYKRKHGAKPFGCRKCGKPFAVRGDWRTHEKNCG-K 230
           E  C   + H  SR L D   ++ H+ RKHG K + C KC K +AV+ DW+ H K CG +
Sbjct: 121 EPTC---VHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTR 177

Query: 231 LWFCICGSDFKHKRSLKDHVRAFGDGHAPHTV 262
            + C CG+ F  + S   H RAF D  A  +V
Sbjct: 178 EYRCDCGTLFSRRDSFITH-RAFCDALAQESV 208


>Medtr8g017210.1 | C2H2-like zinc finger protein, putative | HC |
           chr8:5790010-5786899 | 20130731
          Length = 517

 Score = 94.0 bits (232), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 76/152 (50%), Gaps = 13/152 (8%)

Query: 115 LIGPTQFSCTVCNKMFNRYNNMQMHMWGHGSQYRKGPESLRGAKPASSMLRLPCYCCAE- 173
           L+   +F C +CNK F R  N+Q+H  GH   ++         +  S  +R   Y C E 
Sbjct: 85  LLAKNRFICEICNKGFQRDQNLQLHRRGHNLPWKL-------KQRTSKEIRKKVYVCPEP 137

Query: 174 GCKNNIDHPRSRPLKDFRTLQTHYKRKHGAKPFGCRKCGKPFAVRGDWRTHEKNCG-KLW 232
            C   + H  SR L D   ++ H+ RKHG K + C KC K +AV+ DW+ H K CG + +
Sbjct: 138 TC---VHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREY 194

Query: 233 FCICGSDFKHKRSLKDHVRAFGDGHAPHTVES 264
            C CG+ F  + S   H RAF D  A  +  +
Sbjct: 195 RCDCGTLFSRRDSFITH-RAFCDALAEESARA 225


>Medtr1g016010.1 | C2H2-type zinc finger protein | HC |
           chr1:4158857-4161721 | 20130731
          Length = 452

 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/155 (36%), Positives = 80/155 (51%), Gaps = 13/155 (8%)

Query: 103 QGQYWIPSPAQILIGPTQFSCTVCNKMFNRYNNMQMHMWGHGSQYRKGPESLRGAKPASS 162
           + Q    SP Q L+   +F C +CNK F R  N+Q+H  GH   ++    ++      + 
Sbjct: 53  EAQVLALSP-QTLLATNRFICEICNKGFQRDQNLQLHKRGHNLPWKLKKRNV------NE 105

Query: 163 MLRLPCYCCAE-GCKNNIDHPRSRPLKDFRTLQTHYKRKHGAKPFGCRKCGKPFAVRGDW 221
           ++R   Y C E  C   + H  SR L D   ++ H+ RKHG K + C KC K +AV+ DW
Sbjct: 106 IIRKKVYVCPEPTC---VHHDPSRALGDLTGIKKHFFRKHGEKKWKCEKCSKRYAVQSDW 162

Query: 222 RTHEKNCG-KLWFCICGSDFKHKRSLKDHVRAFGD 255
           + H K CG K + C CG+ F  + S   H RAF D
Sbjct: 163 KAHSKICGTKEYKCDCGTLFSRRDSFITH-RAFCD 196


>Medtr2g099990.1 | C2H2-type zinc finger protein | HC |
           chr2:42897047-42899888 | 20130731
          Length = 468

 Score = 92.8 bits (229), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 89/185 (48%), Gaps = 19/185 (10%)

Query: 79  TTDTTPISKPDHNQHHHLASSAPVQGQYWIPSPAQILIGPTQFSCTVCNKMFNRYNNMQM 138
           T D TP  K       +L  +   Q +    SP + L+   +F C +CNK F R  N+Q+
Sbjct: 39  THDETPAKK-----RRNLPGNPDPQAEVIALSP-KTLMATNRFICEICNKGFQRDQNLQL 92

Query: 139 HMWGHGSQYRKGPESLRGAKPASSMLRLPCYCCAE-GCKNNIDHPRSRPLKDFRTLQTHY 197
           H  GH   ++         +  S+ +R   Y C E  C   + H  SR L D   ++ H+
Sbjct: 93  HKRGHNLPWKL-------KQRTSNEIRKKVYVCPEPTC---VHHDPSRALGDLTGIKKHF 142

Query: 198 KRKHGAKPFGCRKCGKPFAVRGDWRTHEKNCG-KLWFCICGSDFKHKRSLKDHVRAFGDG 256
            RKHG K + C KC K +AV+ DW+ H K CG + + C CG+ F  + S   H RAF D 
Sbjct: 143 CRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITH-RAFCDA 201

Query: 257 HAPHT 261
            A  +
Sbjct: 202 LAEES 206


>Medtr1g112270.2 | C2H2 zinc finger protein, putative | HC |
           chr1:50790900-50782752 | 20130731
          Length = 571

 Score = 91.7 bits (226), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 54/148 (36%), Positives = 75/148 (50%), Gaps = 13/148 (8%)

Query: 113 QILIGPTQFSCTVCNKMFNRYNNMQMHMWGHGSQYRKGPESLRGAKPASSMLRLPCYCCA 172
           + L+   +F C VCNK F R  N+Q+H  GH   ++   ++ +  K          Y C 
Sbjct: 65  KTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEPKR-------KVYLCP 117

Query: 173 E-GCKNNIDHPRSRPLKDFRTLQTHYKRKHGAKPFGCRKCGKPFAVRGDWRTHEKNCG-K 230
           E  C   + H  SR L D   ++ HY RKHG K + C KC K +AV+ DW+ H K CG +
Sbjct: 118 EPTC---VHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTR 174

Query: 231 LWFCICGSDFKHKRSLKDHVRAFGDGHA 258
            + C CG+ F  + S   H RAF D  A
Sbjct: 175 EYRCDCGTLFSRRDSFITH-RAFCDALA 201


>Medtr1g112270.1 | C2H2 zinc finger protein, putative | HC |
           chr1:50789869-50782797 | 20130731
          Length = 582

 Score = 91.7 bits (226), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 54/148 (36%), Positives = 75/148 (50%), Gaps = 13/148 (8%)

Query: 113 QILIGPTQFSCTVCNKMFNRYNNMQMHMWGHGSQYRKGPESLRGAKPASSMLRLPCYCCA 172
           + L+   +F C VCNK F R  N+Q+H  GH   ++   ++ +  K          Y C 
Sbjct: 76  KTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEPKR-------KVYLCP 128

Query: 173 E-GCKNNIDHPRSRPLKDFRTLQTHYKRKHGAKPFGCRKCGKPFAVRGDWRTHEKNCG-K 230
           E  C   + H  SR L D   ++ HY RKHG K + C KC K +AV+ DW+ H K CG +
Sbjct: 129 EPTC---VHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTR 185

Query: 231 LWFCICGSDFKHKRSLKDHVRAFGDGHA 258
            + C CG+ F  + S   H RAF D  A
Sbjct: 186 EYRCDCGTLFSRRDSFITH-RAFCDALA 212


>Medtr2g093960.1 | C2H2-type zinc finger protein | LC |
           chr2:40039886-40042385 | 20130731
          Length = 414

 Score = 91.7 bits (226), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 55/140 (39%), Positives = 74/140 (52%), Gaps = 10/140 (7%)

Query: 115 LIGPTQFSCTVCNKMFNRYNNMQMHMWGHGSQYRKGPESLRGAKPASSMLRLPCYCCAEG 174
           L+   +F C VCNK F R  N+Q+H  GH       P  L+  +    ++R   Y C E 
Sbjct: 55  LMTSNRFICEVCNKGFKRDQNLQLHRRGHNL-----PWKLK-QRNKLEVIRKKVYVCPE- 107

Query: 175 CKNNIDHPRSRPLKDFRTLQTHYKRKHGAKPFGCRKCGKPFAVRGDWRTHEKNCG-KLWF 233
            K+ + H  SR L D   ++ H+ RKHG K + C KC K +AV+ DW+ H K CG K + 
Sbjct: 108 -KSCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTKEYR 166

Query: 234 CICGSDFKHKRSLKDHVRAF 253
           C CG+ F  K S   H RAF
Sbjct: 167 CDCGTLFSRKDSFLTH-RAF 185


>Medtr2g099990.2 | C2H2-type zinc finger protein | HC |
           chr2:42897047-42899888 | 20130731
          Length = 399

 Score = 89.4 bits (220), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 75/148 (50%), Gaps = 13/148 (8%)

Query: 116 IGPTQFSCTVCNKMFNRYNNMQMHMWGHGSQYRKGPESLRGAKPASSMLRLPCYCCAE-G 174
           +   +F C +CNK F R  N+Q+H  GH   ++         +  S+ +R   Y C E  
Sbjct: 1   MATNRFICEICNKGFQRDQNLQLHKRGHNLPWKL-------KQRTSNEIRKKVYVCPEPT 53

Query: 175 CKNNIDHPRSRPLKDFRTLQTHYKRKHGAKPFGCRKCGKPFAVRGDWRTHEKNCG-KLWF 233
           C   + H  SR L D   ++ H+ RKHG K + C KC K +AV+ DW+ H K CG + + 
Sbjct: 54  C---VHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYR 110

Query: 234 CICGSDFKHKRSLKDHVRAFGDGHAPHT 261
           C CG+ F  + S   H RAF D  A  +
Sbjct: 111 CDCGTLFSRRDSFITH-RAFCDALAEES 137


>Medtr2g090745.1 | C2H2-like zinc finger protein, putative | HC |
           chr2:38896799-38894235 | 20130731
          Length = 429

 Score = 89.4 bits (220), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 58/157 (36%), Positives = 79/157 (50%), Gaps = 13/157 (8%)

Query: 108 IPSPAQILIGPTQFSCTVCNKMFNRYNNMQMHMWGHGSQYRKGPESLRGAKPASSMLRLP 167
           I    + L+   +F C +C K F R  N+Q+H  GH       P  L+  +  S  +R  
Sbjct: 23  ISLSPKTLMATNRFVCEICLKDFQRDQNLQLHRRGHNL-----PWKLK--QRTSKEIRKR 75

Query: 168 CYCCAE-GCKNNIDHPRSRPLKDFRTLQTHYKRKHGAKPFGCRKCGKPFAVRGDWRTHEK 226
            Y C E  C +N  HP SR L D   ++ H+ RKHG K + C KC K +AV+ DW+ H K
Sbjct: 76  VYVCPEKTCVHN--HP-SRALGDLTGIKKHFCRKHGEKKWKCEKCSKFYAVQSDWKAHSK 132

Query: 227 NCG-KLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTV 262
            CG + + C CG+ F  + S   H RAF D  A  T 
Sbjct: 133 TCGTREYKCDCGTIFSRRDSFVTH-RAFCDALAEETA 168


>Medtr2g017720.1 | F-box associated protein | LC |
           chr2:5437660-5435484 | 20130731
          Length = 432

 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 14/110 (12%)

Query: 115 LIGPTQFSCTVCNKMFNRYNNMQMHMWGHGSQYRKGPESLRGAKPASSMLRLPCYCCAEG 174
           L+   +F C +C K F R  N+Q+H  GH       P  L+  +  S  +R   Y C E 
Sbjct: 336 LMATNRFVCEICLKDFQRDQNLQLHRRGHNL-----PWKLK--QRTSKKIRKRVYVCPEK 388

Query: 175 CKNNIDHPRSRPLKDFRTLQTHYKRKHGAKPFGCRKCGKPFAVRGDWRTH 224
            + + +HP SR L D   ++ H+ RKHG K     KC K + V+ DW+ H
Sbjct: 389 IRVH-NHP-SRALGDLTGIKKHFCRKHGEK-----KCSKFYVVQSDWKAH 431