Miyakogusa Predicted Gene

Lj2g3v1155600.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1155600.1 Non Characterized Hit- tr|I1L4D0|I1L4D0_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,64.29,3e-19,seg,NULL; HEAVY METAL TRANSPORT/DETOXIFICATION
PROTEIN,NULL; COPPER TRANSPORT PROTEIN ATOX1-RELATED,,CUFF.36324.1
         (105 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g055190.1 | transmembrane protein, putative | HC | chr5:22...   126   4e-30

>Medtr5g055190.1 | transmembrane protein, putative | HC |
           chr5:22735493-22733942 | 20130731
          Length = 107

 Score =  126 bits (317), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 64/81 (79%), Positives = 68/81 (83%), Gaps = 1/81 (1%)

Query: 25  YCCMIMRINVDCNACCXXXXXXXXXMKVIETHLIEKQQRRVCVCGRFVPADVAIKIQKKL 84
           YCCMIMRINVDCNACC         MKVIETHLIEKQQRRVCVCGRFVPAD+AIKI+KK+
Sbjct: 26  YCCMIMRINVDCNACCRKLRRIILRMKVIETHLIEKQQRRVCVCGRFVPADIAIKIKKKM 85

Query: 85  NRRVEILEVQ-FEGEEDHNEP 104
           NRRVEILEVQ FEGEE +  P
Sbjct: 86  NRRVEILEVQEFEGEEQNELP 106