Miyakogusa Predicted Gene

Lj2g3v1155190.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1155190.1 Non Characterized Hit- tr|I3S0S3|I3S0S3_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.39,0,HOMOCYSTEINE S-METHYLTRANSFERASE,NULL;
METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE
RELATED,CUFF.36299.1
         (328 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g056640.1 | homocysteine S-methyltransferase-like protein ...   556   e-158
Medtr7g095280.1 | homocysteine S-methyltransferase-like protein ...   334   9e-92
Medtr1g103290.1 | homocysteine S-methyltransferase-like protein ...   319   3e-87
Medtr1g103290.2 | homocysteine S-methyltransferase-like protein ...   265   6e-71

>Medtr5g056640.1 | homocysteine S-methyltransferase-like protein |
           HC | chr5:23320750-23325183 | 20130731
          Length = 326

 Score =  556 bits (1432), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 270/326 (82%), Positives = 292/326 (89%), Gaps = 2/326 (0%)

Query: 1   MKSDKKPSSLQDLIENAPGGCAVTDGGFATQLEKHGASFTDPLWSAVCLIKDPHLIKKVH 60
           MK +KK S LQDLIEN+ GGC VTDGGFATQLEKHGA   DPLWSA+CLIK PHLIKKVH
Sbjct: 1   MKGEKK-SLLQDLIENS-GGCVVTDGGFATQLEKHGAFINDPLWSAICLIKQPHLIKKVH 58

Query: 61  LEYLEAGANILVTSSYQATLPGFLARGLSIEEGEMLLKRSVKLAVEARDSFWNFSKRNPS 120
           +EYLEAGA+ILVTSSYQAT+PGFL++GLSIEEGE LL+RSVKLAVEARDSFW+ +KRNP 
Sbjct: 59  MEYLEAGADILVTSSYQATIPGFLSKGLSIEEGESLLQRSVKLAVEARDSFWSSAKRNPG 118

Query: 121 NKYRQALVAASIGSYGAYLADGSEYRGLYGPDVTLEKLKDFHRRRLQVLVEAGPDLLAFE 180
           NKYR+ALVAASIGSYGAYLADGSEYRGLYGPDV+L KLKDFHRRRLQVLVEAGPDLLAFE
Sbjct: 119 NKYRRALVAASIGSYGAYLADGSEYRGLYGPDVSLVKLKDFHRRRLQVLVEAGPDLLAFE 178

Query: 181 TIPNKIXXXXXXXXXXXXXXXIPSWICFTSVDGENAPSGESFKDCLEAINKSDKVGAVGI 240
           TIPNK+               IPSWICFTSVDGENAPSGESF+ CLE INKS+KV AVGI
Sbjct: 179 TIPNKLEAQACVELLEEINVQIPSWICFTSVDGENAPSGESFQYCLEVINKSNKVEAVGI 238

Query: 241 NCAPPHFMENLICKFKQLTKKAIIVYPNSGEVWDGRAKKWLPSKCFHDEDFGFHATRWRD 300
           NCAPPHFME+LI KFKQLT KAI+VYPNSGEVWDG AKKWLPSKCFHD+DFGF+ATRWR+
Sbjct: 239 NCAPPHFMESLIPKFKQLTNKAIVVYPNSGEVWDGIAKKWLPSKCFHDDDFGFYATRWRE 298

Query: 301 LGAKIIGGCCRTTPSTIQVISNALRE 326
           LGAKIIGGCCRTTPSTIQ+ISNALRE
Sbjct: 299 LGAKIIGGCCRTTPSTIQIISNALRE 324


>Medtr7g095280.1 | homocysteine S-methyltransferase-like protein |
           HC | chr7:38139328-38133194 | 20130731
          Length = 340

 Score =  334 bits (856), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 168/327 (51%), Positives = 217/327 (66%), Gaps = 11/327 (3%)

Query: 8   SSLQDLIENAPGGCAVTDGGFATQLEKHGASFTDPLWSAVCLIKDP--HLIKKVHLEYLE 65
           S + D +  A GG A+ DGG AT+LE+HGA   DPLWSA CLI  P  HLI++VHL+YLE
Sbjct: 4   SLISDFLHRA-GGTAIIDGGLATELERHGADLNDPLWSAKCLISIPQSHLIRQVHLDYLE 62

Query: 66  AGANILVTSSYQATLPGFLARGLSIEEGEMLLKRSVKLAVEARDSFWN-----FSKRNPS 120
            GA+I+ T+SYQAT+ GF  +G S EE E +L+RSV++A EARD ++       S +N  
Sbjct: 63  NGADIITTASYQATIQGFKEKGFSNEESENMLRRSVEIACEARDLYYERCAACSSGKNAD 122

Query: 121 N---KYRQALVAASIGSYGAYLADGSEYRGLYGPDVTLEKLKDFHRRRLQVLVEAGPDLL 177
           +   K R  L+AAS+GSYGAYLADGSEY G YG  +TL+ LKDFHRRR+QVL +A  DLL
Sbjct: 123 DRILKQRPILIAASVGSYGAYLADGSEYSGNYGDAITLKTLKDFHRRRVQVLADASADLL 182

Query: 178 AFETIPNKIXXXXXXXXXXXXXXXIPSWICFTSVDGENAPSGESFKDCLEAINKSDKVGA 237
           AFETIPNKI               +P+W CF S DG N  SG+S  +C       +KV A
Sbjct: 183 AFETIPNKIEAQAFAELLEEENIKVPAWFCFNSKDGINVVSGDSIVECGSIAESCNKVIA 242

Query: 238 VGINCAPPHFMENLICKFKQLTKKAIIVYPNSGEVWDGRAKKWLPSKCFHDEDFGFHATR 297
           VGINC PP F+  LI   K++T K I +YPNSGE +DG  K+W+ +    D+DF  + ++
Sbjct: 243 VGINCTPPRFIHGLILLLKKVTTKPIAIYPNSGETYDGERKEWMQNTGVTDKDFVSYVSK 302

Query: 298 WRDLGAKIIGGCCRTTPSTIQVISNAL 324
           W +LGA ++GGCCRTTP T++ I N L
Sbjct: 303 WCELGACLVGGCCRTTPVTVRGIYNTL 329


>Medtr1g103290.1 | homocysteine S-methyltransferase-like protein |
           HC | chr1:46744608-46748707 | 20130731
          Length = 331

 Score =  319 bits (817), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 157/322 (48%), Positives = 211/322 (65%), Gaps = 8/322 (2%)

Query: 10  LQDLIENAPGGCAVTDGGFATQLEKHGASFTDPLWSAVCLIKDPHLIKKVHLEYLEAGAN 69
           ++D + N  GG  + DGGFAT+LE+HG    DPLWSA CL   PHL+++VHL+YL++GAN
Sbjct: 2   MKDFL-NKCGGYGIIDGGFATELERHGIDLNDPLWSAKCLFTSPHLVRRVHLDYLDSGAN 60

Query: 70  ILVTSSYQATLPGFLARGLSIEEGEMLLKRSVKLAVEARDSFWNFSK-------RNPSNK 122
           I++TSSYQAT+ GF A+G S EEG+ LL+RSV+LA EARD +++          R+   +
Sbjct: 61  IILTSSYQATIQGFEAKGFSKEEGQALLRRSVELAREARDIYYDRCTKDSFDFIRDERYR 120

Query: 123 YRQALVAASIGSYGAYLADGSEYRGLYGPDVTLEKLKDFHRRRLQVLVEAGPDLLAFETI 182
            R  L+AAS+GSYGAYLADGSEY G YG  +T+  LKDFHR R+++LV+AG DL+AFETI
Sbjct: 121 SRPILIAASVGSYGAYLADGSEYTGDYGDAITVHTLKDFHRERVKILVDAGADLIAFETI 180

Query: 183 PNKIXXXXXXXXXXXXXXXIPSWICFTSVDGENAPSGESFKDCLEAINKSDKVGAVGINC 242
           PNK+               IP+W  F+  D  N  SG+S  +C    +   +V AVG+NC
Sbjct: 181 PNKLDAQAYAELLEEEGIEIPAWFSFSCKDENNVASGDSILECASIADSCPQVVAVGVNC 240

Query: 243 APPHFMENLICKFKQLTKKAIIVYPNSGEVWDGRAKKWLPSKCFHDEDFGFHATRWRDLG 302
             P F+  LI   K++T K I+VYPNSGE ++     W+ S    +EDF  +  +WR  G
Sbjct: 241 TAPRFIHGLISSIKKVTSKPILVYPNSGETYNAENNTWVKSSGEAEEDFVPYIGKWRYAG 300

Query: 303 AKIIGGCCRTTPSTIQVISNAL 324
           A + GGCCRTTP TI+ I+ AL
Sbjct: 301 ATLFGGCCRTTPKTIRGITEAL 322


>Medtr1g103290.2 | homocysteine S-methyltransferase-like protein |
           HC | chr1:46746234-46748707 | 20130731
          Length = 307

 Score =  265 bits (676), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 133/275 (48%), Positives = 178/275 (64%), Gaps = 7/275 (2%)

Query: 57  KKVHLEYLEAGANILVTSSYQATLPGFLARGLSIEEGEMLLKRSVKLAVEARDSFWNFSK 116
           K VHL+YL++GANI++TSSYQAT+ GF A+G S EEG+ LL+RSV+LA EARD +++   
Sbjct: 24  KLVHLDYLDSGANIILTSSYQATIQGFEAKGFSKEEGQALLRRSVELAREARDIYYDRCT 83

Query: 117 -------RNPSNKYRQALVAASIGSYGAYLADGSEYRGLYGPDVTLEKLKDFHRRRLQVL 169
                  R+   + R  L+AAS+GSYGAYLADGSEY G YG  +T+  LKDFHR R+++L
Sbjct: 84  KDSFDFIRDERYRSRPILIAASVGSYGAYLADGSEYTGDYGDAITVHTLKDFHRERVKIL 143

Query: 170 VEAGPDLLAFETIPNKIXXXXXXXXXXXXXXXIPSWICFTSVDGENAPSGESFKDCLEAI 229
           V+AG DL+AFETIPNK+               IP+W  F+  D  N  SG+S  +C    
Sbjct: 144 VDAGADLIAFETIPNKLDAQAYAELLEEEGIEIPAWFSFSCKDENNVASGDSILECASIA 203

Query: 230 NKSDKVGAVGINCAPPHFMENLICKFKQLTKKAIIVYPNSGEVWDGRAKKWLPSKCFHDE 289
           +   +V AVG+NC  P F+  LI   K++T K I+VYPNSGE ++     W+ S    +E
Sbjct: 204 DSCPQVVAVGVNCTAPRFIHGLISSIKKVTSKPILVYPNSGETYNAENNTWVKSSGEAEE 263

Query: 290 DFGFHATRWRDLGAKIIGGCCRTTPSTIQVISNAL 324
           DF  +  +WR  GA + GGCCRTTP TI+ I+ AL
Sbjct: 264 DFVPYIGKWRYAGATLFGGCCRTTPKTIRGITEAL 298