Miyakogusa Predicted Gene

Lj2g3v1141850.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1141850.1 Non Characterized Hit- tr|F6HFN6|F6HFN6_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,62.26,0.00000002, ,CUFF.36420.1
         (126 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g084120.1 | transcription factor | HC | chr6:31420208-3142...    50   4e-07
Medtr5g048860.7 | BHLH transcription factor | HC | chr5:21359767...    50   4e-07
Medtr5g048860.6 | BHLH transcription factor | HC | chr5:21359767...    50   4e-07
Medtr5g048860.5 | BHLH transcription factor | HC | chr5:21359767...    50   4e-07
Medtr5g048860.1 | BHLH transcription factor | HC | chr5:21359821...    50   4e-07
Medtr5g048860.3 | BHLH transcription factor | HC | chr5:21360103...    50   4e-07
Medtr5g048860.10 | BHLH transcription factor | HC | chr5:2136019...    50   4e-07
Medtr5g048860.4 | BHLH transcription factor | HC | chr5:21360103...    50   4e-07
Medtr5g048860.8 | BHLH transcription factor | HC | chr5:21359821...    50   4e-07
Medtr5g048860.9 | BHLH transcription factor | HC | chr5:21360103...    50   4e-07
Medtr5g048860.2 | BHLH transcription factor | HC | chr5:21360103...    50   4e-07
Medtr1g017350.5 | transcription factor | HC | chr1:4805633-48009...    48   3e-06
Medtr1g017350.3 | transcription factor | HC | chr1:4807563-48009...    48   3e-06
Medtr1g017350.2 | transcription factor | HC | chr1:4805633-48009...    48   3e-06
Medtr1g017350.1 | transcription factor | HC | chr1:4805633-48009...    48   3e-06
Medtr1g017350.4 | transcription factor | HC | chr1:4805633-48009...    47   3e-06
Medtr8g012290.1 | BHLH transcription factor | HC | chr8:3449775-...    46   9e-06
Medtr8g012290.2 | BHLH transcription factor | HC | chr8:3449797-...    46   9e-06

>Medtr6g084120.1 | transcription factor | HC |
           chr6:31420208-31422275 | 20130731
          Length = 263

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/58 (51%), Positives = 37/58 (63%), Gaps = 1/58 (1%)

Query: 55  GDSFTPYSAPGCTEKNKSMVGNKRKRNSERLKEKQNEVIHVRAKRGQATNSHSLAERV 112
           G+S    S  G   K     G KR ++ E  +EK  EV+HVRA+RGQAT+SHSLAERV
Sbjct: 116 GNSTPAVSESGSKTKLSGGRG-KRVKSYETEEEKAKEVVHVRARRGQATDSHSLAERV 172


>Medtr5g048860.7 | BHLH transcription factor | HC |
           chr5:21359767-21356247 | 20130731
          Length = 558

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 3/64 (4%)

Query: 52  QNLGDSFTPYSAPGCTEKNKSMV---GNKRKRNSERLKEKQNEVIHVRAKRGQATNSHSL 108
           QN G    P +   C ++  S +   G   K+ S+     + E IHVRA+RGQATNSHSL
Sbjct: 319 QNEGAKDNPENQQKCDQQPTSTIKASGKNAKQGSQNSDPPKEEYIHVRARRGQATNSHSL 378

Query: 109 AERV 112
           AERV
Sbjct: 379 AERV 382


>Medtr5g048860.6 | BHLH transcription factor | HC |
           chr5:21359767-21356205 | 20130731
          Length = 558

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 3/64 (4%)

Query: 52  QNLGDSFTPYSAPGCTEKNKSMV---GNKRKRNSERLKEKQNEVIHVRAKRGQATNSHSL 108
           QN G    P +   C ++  S +   G   K+ S+     + E IHVRA+RGQATNSHSL
Sbjct: 319 QNEGAKDNPENQQKCDQQPTSTIKASGKNAKQGSQNSDPPKEEYIHVRARRGQATNSHSL 378

Query: 109 AERV 112
           AERV
Sbjct: 379 AERV 382


>Medtr5g048860.5 | BHLH transcription factor | HC |
           chr5:21359767-21356205 | 20130731
          Length = 558

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 3/64 (4%)

Query: 52  QNLGDSFTPYSAPGCTEKNKSMV---GNKRKRNSERLKEKQNEVIHVRAKRGQATNSHSL 108
           QN G    P +   C ++  S +   G   K+ S+     + E IHVRA+RGQATNSHSL
Sbjct: 319 QNEGAKDNPENQQKCDQQPTSTIKASGKNAKQGSQNSDPPKEEYIHVRARRGQATNSHSL 378

Query: 109 AERV 112
           AERV
Sbjct: 379 AERV 382


>Medtr5g048860.1 | BHLH transcription factor | HC |
           chr5:21359821-21356205 | 20130731
          Length = 558

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 3/64 (4%)

Query: 52  QNLGDSFTPYSAPGCTEKNKSMV---GNKRKRNSERLKEKQNEVIHVRAKRGQATNSHSL 108
           QN G    P +   C ++  S +   G   K+ S+     + E IHVRA+RGQATNSHSL
Sbjct: 319 QNEGAKDNPENQQKCDQQPTSTIKASGKNAKQGSQNSDPPKEEYIHVRARRGQATNSHSL 378

Query: 109 AERV 112
           AERV
Sbjct: 379 AERV 382


>Medtr5g048860.3 | BHLH transcription factor | HC |
           chr5:21360103-21356247 | 20130731
          Length = 558

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 3/64 (4%)

Query: 52  QNLGDSFTPYSAPGCTEKNKSMV---GNKRKRNSERLKEKQNEVIHVRAKRGQATNSHSL 108
           QN G    P +   C ++  S +   G   K+ S+     + E IHVRA+RGQATNSHSL
Sbjct: 319 QNEGAKDNPENQQKCDQQPTSTIKASGKNAKQGSQNSDPPKEEYIHVRARRGQATNSHSL 378

Query: 109 AERV 112
           AERV
Sbjct: 379 AERV 382


>Medtr5g048860.10 | BHLH transcription factor | HC |
           chr5:21360190-21356205 | 20130731
          Length = 558

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 3/64 (4%)

Query: 52  QNLGDSFTPYSAPGCTEKNKSMV---GNKRKRNSERLKEKQNEVIHVRAKRGQATNSHSL 108
           QN G    P +   C ++  S +   G   K+ S+     + E IHVRA+RGQATNSHSL
Sbjct: 319 QNEGAKDNPENQQKCDQQPTSTIKASGKNAKQGSQNSDPPKEEYIHVRARRGQATNSHSL 378

Query: 109 AERV 112
           AERV
Sbjct: 379 AERV 382


>Medtr5g048860.4 | BHLH transcription factor | HC |
           chr5:21360103-21356205 | 20130731
          Length = 558

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 3/64 (4%)

Query: 52  QNLGDSFTPYSAPGCTEKNKSMV---GNKRKRNSERLKEKQNEVIHVRAKRGQATNSHSL 108
           QN G    P +   C ++  S +   G   K+ S+     + E IHVRA+RGQATNSHSL
Sbjct: 319 QNEGAKDNPENQQKCDQQPTSTIKASGKNAKQGSQNSDPPKEEYIHVRARRGQATNSHSL 378

Query: 109 AERV 112
           AERV
Sbjct: 379 AERV 382


>Medtr5g048860.8 | BHLH transcription factor | HC |
           chr5:21359821-21356247 | 20130731
          Length = 558

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 3/64 (4%)

Query: 52  QNLGDSFTPYSAPGCTEKNKSMV---GNKRKRNSERLKEKQNEVIHVRAKRGQATNSHSL 108
           QN G    P +   C ++  S +   G   K+ S+     + E IHVRA+RGQATNSHSL
Sbjct: 319 QNEGAKDNPENQQKCDQQPTSTIKASGKNAKQGSQNSDPPKEEYIHVRARRGQATNSHSL 378

Query: 109 AERV 112
           AERV
Sbjct: 379 AERV 382


>Medtr5g048860.9 | BHLH transcription factor | HC |
           chr5:21360103-21356205 | 20130731
          Length = 558

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 3/64 (4%)

Query: 52  QNLGDSFTPYSAPGCTEKNKSMV---GNKRKRNSERLKEKQNEVIHVRAKRGQATNSHSL 108
           QN G    P +   C ++  S +   G   K+ S+     + E IHVRA+RGQATNSHSL
Sbjct: 319 QNEGAKDNPENQQKCDQQPTSTIKASGKNAKQGSQNSDPPKEEYIHVRARRGQATNSHSL 378

Query: 109 AERV 112
           AERV
Sbjct: 379 AERV 382


>Medtr5g048860.2 | BHLH transcription factor | HC |
           chr5:21360103-21356247 | 20130731
          Length = 558

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 3/64 (4%)

Query: 52  QNLGDSFTPYSAPGCTEKNKSMV---GNKRKRNSERLKEKQNEVIHVRAKRGQATNSHSL 108
           QN G    P +   C ++  S +   G   K+ S+     + E IHVRA+RGQATNSHSL
Sbjct: 319 QNEGAKDNPENQQKCDQQPTSTIKASGKNAKQGSQNSDPPKEEYIHVRARRGQATNSHSL 378

Query: 109 AERV 112
           AERV
Sbjct: 379 AERV 382


>Medtr1g017350.5 | transcription factor | HC | chr1:4805633-4800948
           | 20130731
          Length = 418

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/38 (60%), Positives = 27/38 (71%)

Query: 75  GNKRKRNSERLKEKQNEVIHVRAKRGQATNSHSLAERV 112
           G + K NS      ++  IHVRA+RGQATNSHSLAERV
Sbjct: 240 GKQAKDNSPSGDASKDNFIHVRARRGQATNSHSLAERV 277


>Medtr1g017350.3 | transcription factor | HC | chr1:4807563-4800948
           | 20130731
          Length = 421

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/38 (60%), Positives = 27/38 (71%)

Query: 75  GNKRKRNSERLKEKQNEVIHVRAKRGQATNSHSLAERV 112
           G + K NS      ++  IHVRA+RGQATNSHSLAERV
Sbjct: 240 GKQAKDNSPSGDASKDNFIHVRARRGQATNSHSLAERV 277


>Medtr1g017350.2 | transcription factor | HC | chr1:4805633-4800948
           | 20130731
          Length = 421

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/38 (60%), Positives = 27/38 (71%)

Query: 75  GNKRKRNSERLKEKQNEVIHVRAKRGQATNSHSLAERV 112
           G + K NS      ++  IHVRA+RGQATNSHSLAERV
Sbjct: 240 GKQAKDNSPSGDASKDNFIHVRARRGQATNSHSLAERV 277


>Medtr1g017350.1 | transcription factor | HC | chr1:4805633-4800948
           | 20130731
          Length = 426

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/38 (60%), Positives = 27/38 (71%)

Query: 75  GNKRKRNSERLKEKQNEVIHVRAKRGQATNSHSLAERV 112
           G + K NS      ++  IHVRA+RGQATNSHSLAERV
Sbjct: 240 GKQAKDNSPSGDASKDNFIHVRARRGQATNSHSLAERV 277


>Medtr1g017350.4 | transcription factor | HC | chr1:4805633-4800948
           | 20130731
          Length = 423

 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/38 (60%), Positives = 27/38 (71%)

Query: 75  GNKRKRNSERLKEKQNEVIHVRAKRGQATNSHSLAERV 112
           G + K NS      ++  IHVRA+RGQATNSHSLAERV
Sbjct: 240 GKQAKDNSPSGDASKDNFIHVRARRGQATNSHSLAERV 277


>Medtr8g012290.1 | BHLH transcription factor | HC |
           chr8:3449775-3453461 | 20130731
          Length = 497

 Score = 45.8 bits (107), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 28/36 (77%)

Query: 77  KRKRNSERLKEKQNEVIHVRAKRGQATNSHSLAERV 112
           K+ ++  +  E Q + IHVRA+RGQAT+SHSLAERV
Sbjct: 273 KQNKSDSKPPEPQKDYIHVRARRGQATDSHSLAERV 308


>Medtr8g012290.2 | BHLH transcription factor | HC |
           chr8:3449797-3453478 | 20130731
          Length = 498

 Score = 45.8 bits (107), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 28/36 (77%)

Query: 77  KRKRNSERLKEKQNEVIHVRAKRGQATNSHSLAERV 112
           K+ ++  +  E Q + IHVRA+RGQAT+SHSLAERV
Sbjct: 273 KQNKSDSKPPEPQKDYIHVRARRGQATDSHSLAERV 308