Miyakogusa Predicted Gene

Lj2g3v1108490.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1108490.3 tr|B9HBI4|B9HBI4_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_763645 PE=4 SV=1,65.85,0.00004,
,CUFF.36277.3
         (65 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g007807.1 | xyloglucan glycosyltransferase | HC | chr6:202...    50   5e-07
Medtr4g006010.1 | xyloglucan glycosyltransferase | HC | chr4:470...    50   5e-07

>Medtr6g007807.1 | xyloglucan glycosyltransferase | HC |
           chr6:2020694-2024940 | 20130731
          Length = 666

 Score = 50.1 bits (118), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/43 (55%), Positives = 30/43 (69%)

Query: 19  FCLCLPAILTSNIAFSKKANFIFLFFLLRKIVQHLVMMRLFVV 61
           F LCLPA+LT+ I+  KKAN IFLFFLLRK++       LF +
Sbjct: 443 FRLCLPAVLTAKISIWKKANLIFLFFLLRKLILPFYSFTLFCI 485


>Medtr4g006010.1 | xyloglucan glycosyltransferase | HC |
           chr4:470610-474600 | 20130731
          Length = 699

 Score = 49.7 bits (117), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 30/43 (69%)

Query: 19  FCLCLPAILTSNIAFSKKANFIFLFFLLRKIVQHLVMMRLFVV 61
           F LCLPAI+TS IAF KK N IFLFFLLRK++       LF +
Sbjct: 477 FRLCLPAIITSKIAFWKKTNLIFLFFLLRKLILPFYSFTLFCI 519