Miyakogusa Predicted Gene

Lj2g3v1106420.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1106420.1 CUFF.36274.1
         (265 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g033480.1 | anthranilate synthase component II | HC | chr1...   441   e-124
Medtr1g095360.2 | para-aminobenzoate synthase | HC | chr1:428881...   109   3e-24
Medtr1g095360.1 | para-aminobenzoate synthase | HC | chr1:428881...    96   3e-20
Medtr3g095490.1 | carbamoylphosphate synthase small subunit | HC...    62   5e-10
Medtr4g103830.1 | carbamoylphosphate synthase small subunit | HC...    61   9e-10
Medtr4g103830.2 | carbamoylphosphate synthase small subunit | HC...    60   3e-09
Medtr3g095490.2 | carbamoylphosphate synthase small subunit | HC...    52   9e-07

>Medtr1g033480.1 | anthranilate synthase component II | HC |
           chr1:12080774-12076381 | 20130731
          Length = 270

 Score =  441 bits (1133), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 212/270 (78%), Positives = 236/270 (87%), Gaps = 5/270 (1%)

Query: 1   MAATFISHTSLVQPNPSLPRTPQQPPL---NVRFVTKRGNGEGPKASAGVLEANQKPPMS 57
           MAATFIS  SL+QPNPSL  +P Q P    N+RF  KR  G   KAS+G L  N K  +S
Sbjct: 1   MAATFISRISLLQPNPSLSLSPHQSPQLSSNLRFEAKRAKGVVLKASSGALNVNSKQGVS 60

Query: 58  AKKT--SNPIVVIDNYDSFTYNLCQYMGELGFHFEVYRNDELTVEELKRKNPRGVLISPG 115
            +K+  ++PIVVIDNYDSFTYNLCQY+GELG HFEVYRNDELTVEELKRKNPRGVLISPG
Sbjct: 61  VEKSKSNDPIVVIDNYDSFTYNLCQYIGELGVHFEVYRNDELTVEELKRKNPRGVLISPG 120

Query: 116 PGTPQDSGISLQTVMELGPIVPVFGVCMGLQCIGEAFGGKVVRSPFGVVHGKSSLVYYDE 175
           PGTPQDSGISLQTV ELGP +PVFGVCMGLQC+GEAFGGK++R+P GV+HGKSSLVYYDE
Sbjct: 121 PGTPQDSGISLQTVFELGPTIPVFGVCMGLQCMGEAFGGKIIRAPSGVMHGKSSLVYYDE 180

Query: 176 KGEDGLLSGLPNPFLAARYHSLVIEKESFPDEELELTAWTEDGLVMAARHKKYRHLQGVQ 235
           KGEDGLL+GLPNPFLA RYHSLVIEKESFPD+ELE+TAWTEDGL+MAARHKKYRH+QGVQ
Sbjct: 181 KGEDGLLAGLPNPFLAGRYHSLVIEKESFPDDELEVTAWTEDGLIMAARHKKYRHMQGVQ 240

Query: 236 FHPESIITPEGRTIVRNFIKLIEKKEAGGS 265
           FHPESIITP+G+TIV NF+KLIEKKEA  S
Sbjct: 241 FHPESIITPDGKTIVHNFVKLIEKKEAARS 270


>Medtr1g095360.2 | para-aminobenzoate synthase | HC |
           chr1:42888171-42898308 | 20130731
          Length = 838

 Score =  109 bits (272), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/218 (37%), Positives = 116/218 (53%), Gaps = 29/218 (13%)

Query: 66  VVIDNYDSFTYNLCQYMGEL-GFHFEVYRNDELTVEEL-----KRKNPRGVLISPGPGTP 119
           ++IDNYDS+TYN+ Q +  + G    V +ND+ T EEL     +      +++SPGPG+P
Sbjct: 83  LLIDNYDSYTYNIYQELSVINGVPPVVIQNDDWTWEELCYYLYEENAFDNIVLSPGPGSP 142

Query: 120 ---QDSGISLQTVMELGPIVPVFGVCMGLQCIGEAFGGKVVRSPFGVVHGKSSLVYYDE- 175
              +D GI LQ + E   I P+ GVC+G Q +G   G +VV +    VHG+ S V ++  
Sbjct: 143 ACPEDIGICLQILRECRDI-PILGVCLGHQALGYVHGAQVVHAS-EPVHGRLSEVEHNGC 200

Query: 176 KGEDGLLSGLPNPFLAARYHSLVIEKESFPDEELELTAWTEDG---------------LV 220
           +   G+ SG  + F   RYHSLVI+ ES P E L   AWT                  ++
Sbjct: 201 QLFQGIPSGRNSGFKVVRYHSLVIDSESLP-EVLIPIAWTSRNGSSSLVEYGQTRNARVL 259

Query: 221 MAARHKKYRHLQGVQFHPESIITPEGRTIVRNFIKLIE 258
           M  +H    H  GVQFHPES+ T  G  I +NF ++ +
Sbjct: 260 MGVKHSTRPHY-GVQFHPESVATCHGSQIFKNFREITD 296


>Medtr1g095360.1 | para-aminobenzoate synthase | HC |
           chr1:42888171-42898308 | 20130731
          Length = 873

 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/253 (32%), Positives = 117/253 (46%), Gaps = 64/253 (25%)

Query: 66  VVIDNYDSFTYNLCQYMGEL-GFHFEVYRNDELTVEEL-----KRKNPRGVLISPGPGTP 119
           ++IDNYDS+TYN+ Q +  + G    V +ND+ T EEL     +      +++SPGPG+P
Sbjct: 83  LLIDNYDSYTYNIYQELSVINGVPPVVIQNDDWTWEELCYYLYEENAFDNIVLSPGPGSP 142

Query: 120 ---QDSGISLQTVMELGPIVPVFGVCMGLQCIGEAFGGKVVRSPFGVVHGKSSLVYYDE- 175
              +D GI LQ + E   I P+ GVC+G Q +G   G +VV +    VHG+ S V ++  
Sbjct: 143 ACPEDIGICLQILRECRDI-PILGVCLGHQALGYVHGAQVVHAS-EPVHGRLSEVEHNGC 200

Query: 176 KGEDGLLSGLPNPFLAARYHSLVIEKESFPDEELELTAWTE------------------- 216
           +   G+ SG  + F   RYHSLVI+ ES P E L   AWT                    
Sbjct: 201 QLFQGIPSGRNSGFKVVRYHSLVIDSESLP-EVLIPIAWTSSRTLPFIGSEVLDKYNGHE 259

Query: 217 ---------DGL----------------------VMAARHKKYRHLQGVQFHPESIITPE 245
                    D L                      +M  +H    H  GVQFHPES+ T  
Sbjct: 260 LQTDQSIFLDSLLPEAGNGSSSLVEYGQTRNARVLMGVKHSTRPHY-GVQFHPESVATCH 318

Query: 246 GRTIVRNFIKLIE 258
           G  I +NF ++ +
Sbjct: 319 GSQIFKNFREITD 331


>Medtr3g095490.1 | carbamoylphosphate synthase small subunit | HC |
           chr3:43632987-43635893 | 20130731
          Length = 417

 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 12/157 (7%)

Query: 106 NPRGVLISPGPGTPQDSGISLQTVMELGPIVPVFGVCMGLQCIGEAFGGKVVRSPFGVVH 165
           NP GVL S GPG P     +++TV  +   VPVFG+CMG Q +G+A GG   +  FG  H
Sbjct: 258 NPDGVLFSNGPGDPSAVPYAVETVKNIIGKVPVFGICMGHQLLGQALGGTTYKMKFG-HH 316

Query: 166 GKSSLVYYDEKGEDGLLSGLPNPFLAARYHSLVIEKESFPDEELELTAWTEDGLVMAARH 225
           G +  V     G            ++++ H+  ++  + P E +E+T    +    A   
Sbjct: 317 GGNHPVRNLRTGR---------VEISSQNHNYAVDPATLP-EGVEVTHINLNDSSCAGLA 366

Query: 226 KKYRHLQGVQFHPESIITP-EGRTIVRNFIKLIEKKE 261
              + +  +Q+HPE+   P +     R FI+L++ ++
Sbjct: 367 FPAQKIVSLQYHPEASPGPHDSDNAFREFIELMKHEK 403


>Medtr4g103830.1 | carbamoylphosphate synthase small subunit | HC |
           chr4:42961284-42966551 | 20130731
          Length = 431

 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 90/191 (47%), Gaps = 13/191 (6%)

Query: 76  YNLCQYMGELGFHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVMELGPI 135
           +N+ + +   G    V  +     E LK  NP GVL S GPG P     +++TV  +   
Sbjct: 243 HNILRRLASYGCKITVVPSTWPASETLKL-NPDGVLFSNGPGDPSAVPYAVETVKNIIGK 301

Query: 136 VPVFGVCMGLQCIGEAFGGKVVRSPFGVVHGKSSLVYYDEKGEDGLLSGLPNPFLAARYH 195
           VPVFG+CMG Q +G+A GG   +  FG  HG +  V     G            ++++ H
Sbjct: 302 VPVFGICMGHQLLGQALGGTTYKMKFG-HHGGNHPVRNLRTGR---------VEISSQNH 351

Query: 196 SLVIEKESFPDEELELTAWTEDGLVMAARHKKYRHLQGVQFHPESIITP-EGRTIVRNFI 254
           +  ++  + P + +E+T    +    A      R +  +Q+HPE+   P +     + F+
Sbjct: 352 NYAVDPATLP-KGVEVTHINLNDSSCAGLAFPARKVVSLQYHPEASPGPHDSDNAFKEFV 410

Query: 255 KLIEKKEAGGS 265
           +L+++ ++  S
Sbjct: 411 ELMKQGKSKTS 421


>Medtr4g103830.2 | carbamoylphosphate synthase small subunit | HC |
           chr4:42961284-42966289 | 20130731
          Length = 408

 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 12/165 (7%)

Query: 76  YNLCQYMGELGFHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVMELGPI 135
           +N+ + +   G    V  +     E LK  NP GVL S GPG P     +++TV  +   
Sbjct: 243 HNILRRLASYGCKITVVPSTWPASETLKL-NPDGVLFSNGPGDPSAVPYAVETVKNIIGK 301

Query: 136 VPVFGVCMGLQCIGEAFGGKVVRSPFGVVHGKSSLVYYDEKGEDGLLSGLPNPFLAARYH 195
           VPVFG+CMG Q +G+A GG   +  FG  HG +  V     G            ++++ H
Sbjct: 302 VPVFGICMGHQLLGQALGGTTYKMKFG-HHGGNHPVRNLRTGR---------VEISSQNH 351

Query: 196 SLVIEKESFPDEELELTAWTEDGLVMAARHKKYRHLQGVQFHPES 240
           +  ++  + P + +E+T    +    A      R +  +Q+HPE+
Sbjct: 352 NYAVDPATLP-KGVEVTHINLNDSSCAGLAFPARKVVSLQYHPEA 395


>Medtr3g095490.2 | carbamoylphosphate synthase small subunit | HC |
           chr3:43632852-43636299 | 20130731
          Length = 397

 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 12/148 (8%)

Query: 115 GPGTPQDSGISLQTVMELGPIVPVFGVCMGLQCIGEAFGGKVVRSPFGVVHGKSSLVYYD 174
           GPG P     +++TV  +   VPVFG+CMG Q +G+A GG   +  FG  HG +  V   
Sbjct: 247 GPGDPSAVPYAVETVKNIIGKVPVFGICMGHQLLGQALGGTTYKMKFG-HHGGNHPVRNL 305

Query: 175 EKGEDGLLSGLPNPFLAARYHSLVIEKESFPDEELELTAWTEDGLVMAARHKKYRHLQGV 234
             G            ++++ H+  ++  + P E +E+T    +    A      + +  +
Sbjct: 306 RTGR---------VEISSQNHNYAVDPATLP-EGVEVTHINLNDSSCAGLAFPAQKIVSL 355

Query: 235 QFHPESIITP-EGRTIVRNFIKLIEKKE 261
           Q+HPE+   P +     R FI+L++ ++
Sbjct: 356 QYHPEASPGPHDSDNAFREFIELMKHEK 383