Miyakogusa Predicted Gene

Lj2g3v1104020.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1104020.1 Non Characterized Hit- tr|G6CWG5|G6CWG5_DANPL
Uncharacterized protein OS=Danaus plexippus PE=4
SV=1,46.88,3e-18,DUF2039,Protein of unknown function DUF2039;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.36243.1
         (126 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g015855.1 | DUF2039 family protein | HC | chr6:5528200-553...   210   3e-55

>Medtr6g015855.1 | DUF2039 family protein | HC |
           chr6:5528200-5532072 | 20130731
          Length = 233

 Score =  210 bits (534), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 97/117 (82%), Positives = 106/117 (90%)

Query: 3   TAAKKTGPPKHQNKVAWKPNAGRKINETEVGGRFRPLSEITGVCPRCRDQIDWKRRYGKY 62
           +++KKTGPPKHQNK+AWKPNAG KINETEVGGRFRPLSEITGVCPRC++QIDWKRRYGKY
Sbjct: 2   SSSKKTGPPKHQNKIAWKPNAGIKINETEVGGRFRPLSEITGVCPRCKEQIDWKRRYGKY 61

Query: 63  KPLAEPAKCQRCTKRAVRQAYHNLCSGCAKEHRVCAKCCCSVARIVGRPLRTLGREK 119
           KPL EPAKCQRC+KR VRQAYHNLC GCAKEHRVCAKCCC V RIVGR +  +  EK
Sbjct: 62  KPLHEPAKCQRCSKRNVRQAYHNLCFGCAKEHRVCAKCCCRVERIVGRDVSEVEAEK 118