Miyakogusa Predicted Gene

Lj2g3v1102920.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1102920.1 Non Characterized Hit- tr|K4BXT9|K4BXT9_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,48.51,2e-19,seg,NULL,CUFF.36227.1
         (132 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g015390.1 | SPIRAL protein, putative | HC | chr6:5047544-5...   121   1e-28
Medtr6g015390.2 | SPIRAL protein, putative | HC | chr6:5047910-5...   121   1e-28
Medtr7g024310.1 | hypothetical protein | LC | chr7:7978814-79761...    85   2e-17

>Medtr6g015390.1 | SPIRAL protein, putative | HC |
           chr6:5047544-5051254 | 20130731
          Length = 139

 Score =  121 bits (304), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 73/127 (57%), Positives = 79/127 (62%), Gaps = 18/127 (14%)

Query: 1   MGRGASSGGGQNSLGYLFGGRETAASNIQGGRAQNADVAPPPVNGGRAQNADVTNNQVEP 60
           MGRG S GGGQ+SLGYLFG  ET  +       Q A+    P+NGGR QNA V +     
Sbjct: 1   MGRGVSCGGGQSSLGYLFGTGETTNN------VQRANTQGEPLNGGRTQNASVASPASVA 54

Query: 61  VIGGR------------ALNAGAASPPIDKEIPAGVPGCLKNNYHRADGQNCGNFLTDRP 108
                            A  A  ASPPIDKE PAG+PGCLKNNYHRADGQNCGNFLTDRP
Sbjct: 55  SPASVASPAAVASPAKVASPARVASPPIDKETPAGIPGCLKNNYHRADGQNCGNFLTDRP 114

Query: 109 STKVHAA 115
           STKVHAA
Sbjct: 115 STKVHAA 121


>Medtr6g015390.2 | SPIRAL protein, putative | HC |
           chr6:5047910-5051254 | 20130731
          Length = 139

 Score =  121 bits (304), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 73/127 (57%), Positives = 79/127 (62%), Gaps = 18/127 (14%)

Query: 1   MGRGASSGGGQNSLGYLFGGRETAASNIQGGRAQNADVAPPPVNGGRAQNADVTNNQVEP 60
           MGRG S GGGQ+SLGYLFG  ET  +       Q A+    P+NGGR QNA V +     
Sbjct: 1   MGRGVSCGGGQSSLGYLFGTGETTNN------VQRANTQGEPLNGGRTQNASVASPASVA 54

Query: 61  VIGGR------------ALNAGAASPPIDKEIPAGVPGCLKNNYHRADGQNCGNFLTDRP 108
                            A  A  ASPPIDKE PAG+PGCLKNNYHRADGQNCGNFLTDRP
Sbjct: 55  SPASVASPAAVASPAKVASPARVASPPIDKETPAGIPGCLKNNYHRADGQNCGNFLTDRP 114

Query: 109 STKVHAA 115
           STKVHAA
Sbjct: 115 STKVHAA 121


>Medtr7g024310.1 | hypothetical protein | LC | chr7:7978814-7976143
           | 20130731
          Length = 229

 Score = 85.1 bits (209), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/100 (51%), Positives = 58/100 (58%), Gaps = 12/100 (12%)

Query: 6   SSGGGQNSLGYLFGGRETAASNIQGGRAQNADVAPPPVNGGRAQNADVTNNQVEPVIGGR 65
           S  GGQ+SLGYLFG  ET          Q+A+    P+NGGR QN  V +          
Sbjct: 138 SCDGGQSSLGYLFGTGETT------NNFQHANTQGEPLNGGRTQNDSVASP------ATV 185

Query: 66  ALNAGAASPPIDKEIPAGVPGCLKNNYHRADGQNCGNFLT 105
           A  A  ASP IDKE PAG+ GCLKNNYHR D QN GNFL+
Sbjct: 186 ATPARVASPLIDKETPAGIYGCLKNNYHRIDEQNIGNFLS 225