Miyakogusa Predicted Gene

Lj2g3v1080740.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1080740.1 tr|B9IKX6|B9IKX6_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_669059 PE=4
SV=1,57.14,0.00000000000009,seg,NULL; FAMILY NOT
NAMED,NULL,NODE_70679_length_2010_cov_25.096020.path2.1
         (454 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g107090.1 | hypothetical protein | HC | chr3:49452455-4944...   367   e-101
Medtr1g056180.1 | EEIG1/EHBP1 protein amine-terminal domain prot...   152   5e-37
Medtr7g106540.1 | EEIG1/EHBP1 protein amine-terminal domain prot...   139   8e-33
Medtr7g106540.2 | EEIG1/EHBP1 protein amine-terminal domain prot...   138   9e-33

>Medtr3g107090.1 | hypothetical protein | HC |
           chr3:49452455-49448631 | 20130731
          Length = 619

 Score =  367 bits (942), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 237/463 (51%), Positives = 290/463 (62%), Gaps = 59/463 (12%)

Query: 8   WWKSTTTRLSKHALKLTQLNLELGLFGTRVASP-NDKVAIEIT------GEAAAKRRCT- 59
           WW ++  + +KH +K+ QL LELGLFG  VA+  NDK+AIEIT        +++   C  
Sbjct: 8   WWLASN-QSNKHTVKVNQLKLELGLFGVNVATTVNDKLAIEITWIKKCNENSSSSFSCMI 66

Query: 60  ---------CTHITSCRRFLS-NKTSSLNWDTPELRSFNLVHKEDAVSSVSYNMEFHVLH 109
                    C+HIT CRRF++  KT S  WD  +L +FNL  K+  +  V++N    VL+
Sbjct: 67  PFHRTLKPPCSHITPCRRFVAAGKTPSHVWDNHDLCAFNLGLKD--ICHVTFN----VLY 120

Query: 110 GKGDAVGEITKAKMTVVGKASVTVDMAELLAGERMKTGSSSHNHHHLQRKLPIHLKVNGL 169
           G+G   GE +K KM VVGK  +T      LA E MKT S      ++QRKLPI LKVNGL
Sbjct: 121 GQGG--GEESKGKMVVVGKVCMT------LAMEEMKTES------NVQRKLPIRLKVNGL 166

Query: 170 IIEATLLVCMRLMKLD------DLQGPFENSIHSEKKSGIIGKLKSLTCLGRKNNVKVDX 223
           IIEATLLVC+RL+         D    FEN++ S+KK G I K K LTCL +K N K D 
Sbjct: 167 IIEATLLVCLRLLLKLRNNSDYDSAITFENTVKSDKKLGTIEKGKYLTCLIKKKNGKFDE 226

Query: 224 XXXXXXXXXXXXXVFYXXXXXXXXXXXXXXXXXXGFHNSESRLGFRSSGTKTPLDTSQSN 283
                        VF                       +ESR+ F SSG KT LD+    
Sbjct: 227 HPYESDGSP----VFDSDESSNESTTSGGSSSSSSNSPTESRVNFPSSGIKTSLDS---- 278

Query: 284 WSYMSRNRSFKGWNTKTDASKQETSTTDPCPLTKSEEHSLQFYLQDSTSSWGVKEFSSRD 343
                 NR FKGW+ KT  ++ ETST    P TKS+E SL+  LQ ++S W +K   SRD
Sbjct: 279 ------NRRFKGWDFKTGTAQLETSTIHQTPFTKSDELSLRSNLQGNSSKWEMKYILSRD 332

Query: 344 GKSKLKTNVFFASFDQRSEKASGESACTVLVALIAHWLHSNKGMPTRAEFDSLITQGSSE 403
           G+SKLKTNVFFASFDQRSEKASGESACTVLVALI+HWLHSN+G+PTR +FD+LITQGSSE
Sbjct: 333 GQSKLKTNVFFASFDQRSEKASGESACTVLVALISHWLHSNQGIPTRTQFDNLITQGSSE 392

Query: 404 WRRLCNSNYYSKLFPDKHFDLETIIDANLRPWVVLPQKSYTGF 446
           WR+LC ++YYSK FPDKHFDLET+IDANLRP VVLPQKSYTGF
Sbjct: 393 WRKLCKNDYYSKHFPDKHFDLETVIDANLRPLVVLPQKSYTGF 435


>Medtr1g056180.1 | EEIG1/EHBP1 protein amine-terminal domain protein
           | HC | chr1:24589156-24585076 | 20130731
          Length = 753

 Score =  152 bits (385), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 69/118 (58%), Positives = 87/118 (73%), Gaps = 1/118 (0%)

Query: 330 STSSWGVKEFSSRDGKSKLKTNVFFASFDQRSEKASGESACTVLVALIAHWLHSNKG-MP 388
           +  SW  KE  SRDG  KL+T VFFAS DQRSE+A+GESACT LVA+IA W  +N+  MP
Sbjct: 415 AVGSWEQKEVMSRDGHMKLQTQVFFASIDQRSERAAGESACTALVAVIADWFQNNRDLMP 474

Query: 389 TRAEFDSLITQGSSEWRRLCNSNYYSKLFPDKHFDLETIIDANLRPWVVLPQKSYTGF 446
            +++FDSLI  GS EWR LC +  Y + FPDKHFDLET++ A +RP  V+P+KS+ GF
Sbjct: 475 IKSQFDSLIRDGSLEWRNLCENQTYRERFPDKHFDLETVVQAKIRPLSVVPEKSFIGF 532


>Medtr7g106540.1 | EEIG1/EHBP1 protein amine-terminal domain protein
           | HC | chr7:43373739-43371223 | 20130731
          Length = 545

 Score =  139 bits (349), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 65/115 (56%), Positives = 85/115 (73%), Gaps = 1/115 (0%)

Query: 333 SWGVKEFSSRDGKSKLKTNVFFASFDQRSEKASGESACTVLVALIAHWLHS-NKGMPTRA 391
           SW  KE +SRDG+ KL+T VFFAS DQRSE+A+GESACT LVA+IA W  + +  MP ++
Sbjct: 210 SWEQKEITSRDGQMKLETQVFFASIDQRSERAAGESACTALVAVIADWFQNYHDFMPLKS 269

Query: 392 EFDSLITQGSSEWRRLCNSNYYSKLFPDKHFDLETIIDANLRPWVVLPQKSYTGF 446
           +FD LI +GSSEWR L ++      FPD HFDLET+++A +RP  V+P KS+ GF
Sbjct: 270 QFDGLIREGSSEWRNLRDNETCRNRFPDGHFDLETVLEAKIRPLSVVPGKSFIGF 324


>Medtr7g106540.2 | EEIG1/EHBP1 protein amine-terminal domain protein
           | HC | chr7:43374781-43371223 | 20130731
          Length = 742

 Score =  138 bits (348), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 65/115 (56%), Positives = 85/115 (73%), Gaps = 1/115 (0%)

Query: 333 SWGVKEFSSRDGKSKLKTNVFFASFDQRSEKASGESACTVLVALIAHWLHS-NKGMPTRA 391
           SW  KE +SRDG+ KL+T VFFAS DQRSE+A+GESACT LVA+IA W  + +  MP ++
Sbjct: 407 SWEQKEITSRDGQMKLETQVFFASIDQRSERAAGESACTALVAVIADWFQNYHDFMPLKS 466

Query: 392 EFDSLITQGSSEWRRLCNSNYYSKLFPDKHFDLETIIDANLRPWVVLPQKSYTGF 446
           +FD LI +GSSEWR L ++      FPD HFDLET+++A +RP  V+P KS+ GF
Sbjct: 467 QFDGLIREGSSEWRNLRDNETCRNRFPDGHFDLETVLEAKIRPLSVVPGKSFIGF 521