Miyakogusa Predicted Gene

Lj2g3v1079580.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1079580.2 Non Characterized Hit- tr|D7SXK2|D7SXK2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,67.65,0,seg,NULL; EMB2773 (EMBRYO DEFECTIVE 2773), BINDING /
PROTEIN BINDING / ZINC ION BINDING,NULL; NIPPED,CUFF.36216.2
         (881 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g015060.1 | cohesin loading factor subunit SCC2 | HC | chr...  1354   0.0  

>Medtr6g015060.1 | cohesin loading factor subunit SCC2 | HC |
            chr6:4887950-4870653 | 20130731
          Length = 1809

 Score = 1354 bits (3504), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 675/882 (76%), Positives = 741/882 (84%), Gaps = 10/882 (1%)

Query: 1    MCTSNANFSGFTRACTEIMSRISDDESSVQDLVCKTFYEFWFEEPSASETQVFGDGSTVS 60
            MC S+ NFSGFTRACTEI+SR++DDESS+QDLVCKTFYEFWFEEPS  +TQVF DGSTV 
Sbjct: 936  MCCSDGNFSGFTRACTEIISRVTDDESSIQDLVCKTFYEFWFEEPSTPQTQVFKDGSTVP 995

Query: 61   LEVAKKTEQIVEMSRGGMPNQQLVTVNPLLVTVIKRNLTLDFLPQSAKAIGVNPVSLATV 120
            LEVAKKTEQIVEM +  +PN QL      LVTVIKR LTLDFLPQSAKA GVNPVSL TV
Sbjct: 996  LEVAKKTEQIVEMLKR-LPNNQL------LVTVIKRCLTLDFLPQSAKASGVNPVSLVTV 1048

Query: 121  RKRCELMCKCLLEKMLQVEEMNSNEVAVGALPYVLVLHAFCLVDPTLCAPASNPSQFVVT 180
            RKRCELMCKCLLEK+LQV+EMNSNE+   ALPYVLVLHAFCLVDPTLCAPASNPSQFV+T
Sbjct: 1049 RKRCELMCKCLLEKILQVDEMNSNELEKHALPYVLVLHAFCLVDPTLCAPASNPSQFVLT 1108

Query: 181  LQPYLKTQVDKREAAQLLESIIFIIDAVLPLLRKLPPCIVEELQLDLKQMIIRNSFLTVV 240
            LQPYLKTQVD     QLLESIIFIID+VLPLLRKLPP IVEEL+ DLKQMI+R+SFL VV
Sbjct: 1109 LQPYLKTQVDNSMVTQLLESIIFIIDSVLPLLRKLPPSIVEELEQDLKQMILRHSFLAVV 1168

Query: 241  HACIKCLCSVSKMAGKGAAVVEHLIQVFFKYLDKEAVDSKQLVGRSLFCIGLLVRYGNCL 300
            HACIKCLCS+S++AGKGAAV+EHLIQVFFK LD EAV +KQLVGRSLFC+GLL+RYGNCL
Sbjct: 1169 HACIKCLCSMSELAGKGAAVIEHLIQVFFKCLDTEAVVNKQLVGRSLFCLGLLIRYGNCL 1228

Query: 301  LASSSNQHSDVKRSLNLCMKYLVVEDLGLKARSLQALGFVLIARPEYMLEKDIGKILERS 360
            LASS N+  DVKRSLNL MKYL  ED  LKARSLQALG+VLIARPEYMLE DIGKILE +
Sbjct: 1229 LASSGNKLVDVKRSLNLFMKYLAGEDYALKARSLQALGYVLIARPEYMLENDIGKILEGT 1288

Query: 361  LSSTADTCLKIQALQTMFEYLLDAESQMTTDKTDGNVADYSVGAGQSVPVAAGAGDTNMC 420
            LSS AD  LKIQALQ MFEYLLDAES+M T++ DG V  +SV AGQSVPVAAGAGDTN+C
Sbjct: 1289 LSSIADDRLKIQALQNMFEYLLDAESKMETEEVDGKVPGHSVRAGQSVPVAAGAGDTNIC 1348

Query: 421  GGIVQLYWDNILGTCLDFSEPVRQSALKIVEVVLRQGLVHPITCVPHLIALETDPLESNS 480
            GGI+QLYW+NILG C+DF+  VRQSALKIVEVVLRQGLVHPITCVP+LIALETDPLESNS
Sbjct: 1349 GGIIQLYWNNILGRCVDFNTQVRQSALKIVEVVLRQGLVHPITCVPYLIALETDPLESNS 1408

Query: 481  KLAHHLLMNMNEKYPAFFETRLGDGLQMSFMFIQSICGS-SENVNHKNQSRIPVSGKGKP 539
            K+AHHLLMNM+EKYPAFFE+ LGDGLQMSFMF+QSI  S  ENVNHK+QS+I VSGKGKP
Sbjct: 1409 KMAHHLLMNMHEKYPAFFESCLGDGLQMSFMFMQSIFVSPDENVNHKSQSKIAVSGKGKP 1468

Query: 540  EAGSLTQARVGVSRIYKLIRGNRISRNKFMSSIVRKFDNPRWNKLVIPFLRYCTEVLALL 599
            EA SL Q+RVGVSRIYKLIRGNRISRNKFMSSIVRKFDNP+WNK VI FL YCTEVLALL
Sbjct: 1469 EADSLAQSRVGVSRIYKLIRGNRISRNKFMSSIVRKFDNPKWNKFVIAFLTYCTEVLALL 1528

Query: 600  PFTSPDEPLYLIYAINRVVQLRAGPLEANFKSWNSSLLRSEGHSTPYENGTCRWGPDEPI 659
            PF +PDEPLYLIY INRVVQ+RAGPLEANFK+W+SSLL+SEG  TP+ NG  +   DE I
Sbjct: 1529 PFVAPDEPLYLIYTINRVVQVRAGPLEANFKAWSSSLLQSEGQGTPHGNGMYQRATDETI 1588

Query: 660  LATPVMSMDLNETFQQNLHAQPIFDDMKSVDLNRTNHQLPDHPLSHNGNLEAKPQAASFM 719
             +T   SMDLN  FQQN+  QP  DDM SVDLN TNHQLPD+PLSHNG L+ KPQAA F 
Sbjct: 1589 HSTQGQSMDLNGPFQQNVDVQPYVDDMTSVDLNGTNHQLPDYPLSHNGRLKVKPQAAGFA 1648

Query: 720  DSCTFSKDDTEEVQAGCLSAIAXXXXXXXXXXXXIMYSLDDARCQAYSPSEPPKPGEVLS 779
            DS TFSKDD E+VQA CLSAIA            IMYSLDDARCQAYSPSEPPKPG+V S
Sbjct: 1649 DSFTFSKDDLEKVQADCLSAIALQLLLKLKRHLKIMYSLDDARCQAYSPSEPPKPGDVFS 1708

Query: 780  KQSIALNISEYQFSLPTTPQELTQRYQEFKNALKEDTMDYSLYTANIRRKRPSITPRKVR 839
            +QSI  NI E QFSLPT+PQEL QRYQEFKNALKEDT+DYSLYTANI+RKRP+ TPRKVR
Sbjct: 1709 RQSIPFNIGESQFSLPTSPQELIQRYQEFKNALKEDTVDYSLYTANIKRKRPTQTPRKVR 1768

Query: 840  KSVHTARXXXXXXXXXXXXXXXXMRQINVS-GRRANLRSSRQ 880
            KS                      R I+ S GRR++LR+SRQ
Sbjct: 1769 KS-GPPMVGGDNDEDDDEDWAGGSRNISFSGGRRSSLRNSRQ 1809