Miyakogusa Predicted Gene

Lj2g3v1069400.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1069400.2 Non Characterized Hit- tr|I0YN72|I0YN72_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,28.97,0.00000000003,seg,NULL,CUFF.36184.2
         (174 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g013815.1 | hypothetical protein | HC | chr6:4417129-44183...   218   2e-57
Medtr6g013805.1 | hypothetical protein | HC | chr6:4413014-44132...    62   2e-10

>Medtr6g013815.1 | hypothetical protein | HC | chr6:4417129-4418373
           | 20130731
          Length = 134

 Score =  218 bits (555), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 100/121 (82%), Positives = 115/121 (95%)

Query: 49  ELACERECSRGEDYRLIKLTITDFNSQKERATVVECKGHDAARFNSIDHAHGWDKDITAL 108
           EL CERECS+GEDYRLIKLTITDFN++KE+ATVVECKGHDAARF+ IDHAHGWDK+IT +
Sbjct: 11  ELECERECSKGEDYRLIKLTITDFNTKKEQATVVECKGHDAARFHCIDHAHGWDKEITGM 70

Query: 109 IEQKDGKKRILVSFECETLKADKAAEDHIRQFMPKLAGLDAIVNIGRMTISGLDFGAAEA 168
           +EQKDGKKRI VSFECETLKA+ AAEDHIR+FMPKLAG+DA+VN+G+MTISGLDFGA EA
Sbjct: 71  VEQKDGKKRITVSFECETLKAEDAAEDHIRKFMPKLAGMDAVVNVGKMTISGLDFGADEA 130

Query: 169 E 169
           +
Sbjct: 131 D 131


>Medtr6g013805.1 | hypothetical protein | HC |
          chr6:4413014-4413297 | 20130731
          Length = 59

 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/38 (73%), Positives = 32/38 (84%)

Query: 19 VASIALLPSGSVSGHFIQLPHSTCYGLHGTELACEREC 56
          VASIALLP+GS+SGHFI LPHSTCYGLHGT  +  + C
Sbjct: 15 VASIALLPNGSISGHFIHLPHSTCYGLHGTGNSLIQPC 52