Miyakogusa Predicted Gene

Lj2g3v1069360.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1069360.1 Non Characterized Hit- tr|D8T6S5|D8T6S5_SELML
Putative uncharacterized protein EID1-2
OS=Selaginella,24.81,0.00000000001,SUBFAMILY NOT NAMED,NULL; FAMILY
NOT NAMED,NULL,CUFF.36191.1
         (248 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g013530.3 | circadian clock coupling factor ZGT | HC | chr...   465   e-131
Medtr6g013530.2 | circadian clock coupling factor ZGT | HC | chr...   465   e-131
Medtr6g013530.1 | circadian clock coupling factor ZGT | HC | chr...   465   e-131
Medtr6g013530.4 | circadian clock coupling factor ZGT | HC | chr...   465   e-131
Medtr7g012790.3 | circadian clock coupling factor ZGT | HC | chr...   436   e-123
Medtr7g012790.1 | circadian clock coupling factor ZGT | HC | chr...   436   e-123
Medtr7g012790.4 | circadian clock coupling factor ZGT | HC | chr...   436   e-123
Medtr7g012790.5 | circadian clock coupling factor ZGT | HC | chr...   436   e-123
Medtr7g012790.2 | circadian clock coupling factor ZGT | HC | chr...   335   3e-92

>Medtr6g013530.3 | circadian clock coupling factor ZGT | HC |
           chr6:4353543-4357508 | 20130731
          Length = 251

 Score =  465 bits (1197), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 215/248 (86%), Positives = 236/248 (95%)

Query: 1   MILTKQYRCVHSASCHCTKGHLSEDVIFLVFHHLNWNPKLIAALSCVCKWFDDLAKRVLW 60
           MI+TKQYRCVHS+SC CTKGHLSED IFLVF++LNWNPKLIA LSCVCKWFDDLAKRVLW
Sbjct: 4   MIITKQYRCVHSSSCQCTKGHLSEDAIFLVFNNLNWNPKLIATLSCVCKWFDDLAKRVLW 63

Query: 61  KEFCLTRAPKMMLDLHSSRSHSVDGSWRALGKLLIYCSGCKKGGLFNNVQVPGHFVHRTR 120
           KEFC TRAPKMM+DL +S +HS+DG+W ALGKLLI+CSGCKKGGLF NV +PGHFV+RTR
Sbjct: 64  KEFCRTRAPKMMIDLQTSGTHSIDGNWSALGKLLIHCSGCKKGGLFKNVHIPGHFVYRTR 123

Query: 121 FSKTSGKSFLLPQCTNDILYVSDPCEHLDQGEEGDLGFFRGIFKSFATSNVRRMLINKGA 180
           FSKTSGKSFLLPQC NDILYVSDPCEHLDQGEEGD+GFFRG+FKSFAT+NVRRMLINKGA
Sbjct: 124 FSKTSGKSFLLPQCINDILYVSDPCEHLDQGEEGDIGFFRGVFKSFATTNVRRMLINKGA 183

Query: 181 QLHPTEVCPYCKAKLWSMLLANMIPKSASCRLGSYEECVEYYVCLNGHMLGICTLLPLSD 240
           QLHPTEVCPYCKA+LWSML ANMIP++ASCRLGSYEECV+Y+VCLNGHM+GICTLLPLSD
Sbjct: 184 QLHPTEVCPYCKARLWSMLQANMIPQTASCRLGSYEECVDYHVCLNGHMVGICTLLPLSD 243

Query: 241 SEEASEKE 248
           SE ASEKE
Sbjct: 244 SEGASEKE 251


>Medtr6g013530.2 | circadian clock coupling factor ZGT | HC |
           chr6:4352966-4357426 | 20130731
          Length = 308

 Score =  465 bits (1197), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 215/248 (86%), Positives = 236/248 (95%)

Query: 1   MILTKQYRCVHSASCHCTKGHLSEDVIFLVFHHLNWNPKLIAALSCVCKWFDDLAKRVLW 60
           MI+TKQYRCVHS+SC CTKGHLSED IFLVF++LNWNPKLIA LSCVCKWFDDLAKRVLW
Sbjct: 61  MIITKQYRCVHSSSCQCTKGHLSEDAIFLVFNNLNWNPKLIATLSCVCKWFDDLAKRVLW 120

Query: 61  KEFCLTRAPKMMLDLHSSRSHSVDGSWRALGKLLIYCSGCKKGGLFNNVQVPGHFVHRTR 120
           KEFC TRAPKMM+DL +S +HS+DG+W ALGKLLI+CSGCKKGGLF NV +PGHFV+RTR
Sbjct: 121 KEFCRTRAPKMMIDLQTSGTHSIDGNWSALGKLLIHCSGCKKGGLFKNVHIPGHFVYRTR 180

Query: 121 FSKTSGKSFLLPQCTNDILYVSDPCEHLDQGEEGDLGFFRGIFKSFATSNVRRMLINKGA 180
           FSKTSGKSFLLPQC NDILYVSDPCEHLDQGEEGD+GFFRG+FKSFAT+NVRRMLINKGA
Sbjct: 181 FSKTSGKSFLLPQCINDILYVSDPCEHLDQGEEGDIGFFRGVFKSFATTNVRRMLINKGA 240

Query: 181 QLHPTEVCPYCKAKLWSMLLANMIPKSASCRLGSYEECVEYYVCLNGHMLGICTLLPLSD 240
           QLHPTEVCPYCKA+LWSML ANMIP++ASCRLGSYEECV+Y+VCLNGHM+GICTLLPLSD
Sbjct: 241 QLHPTEVCPYCKARLWSMLQANMIPQTASCRLGSYEECVDYHVCLNGHMVGICTLLPLSD 300

Query: 241 SEEASEKE 248
           SE ASEKE
Sbjct: 301 SEGASEKE 308


>Medtr6g013530.1 | circadian clock coupling factor ZGT | HC |
           chr6:4352966-4357446 | 20130731
          Length = 308

 Score =  465 bits (1197), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 215/248 (86%), Positives = 236/248 (95%)

Query: 1   MILTKQYRCVHSASCHCTKGHLSEDVIFLVFHHLNWNPKLIAALSCVCKWFDDLAKRVLW 60
           MI+TKQYRCVHS+SC CTKGHLSED IFLVF++LNWNPKLIA LSCVCKWFDDLAKRVLW
Sbjct: 61  MIITKQYRCVHSSSCQCTKGHLSEDAIFLVFNNLNWNPKLIATLSCVCKWFDDLAKRVLW 120

Query: 61  KEFCLTRAPKMMLDLHSSRSHSVDGSWRALGKLLIYCSGCKKGGLFNNVQVPGHFVHRTR 120
           KEFC TRAPKMM+DL +S +HS+DG+W ALGKLLI+CSGCKKGGLF NV +PGHFV+RTR
Sbjct: 121 KEFCRTRAPKMMIDLQTSGTHSIDGNWSALGKLLIHCSGCKKGGLFKNVHIPGHFVYRTR 180

Query: 121 FSKTSGKSFLLPQCTNDILYVSDPCEHLDQGEEGDLGFFRGIFKSFATSNVRRMLINKGA 180
           FSKTSGKSFLLPQC NDILYVSDPCEHLDQGEEGD+GFFRG+FKSFAT+NVRRMLINKGA
Sbjct: 181 FSKTSGKSFLLPQCINDILYVSDPCEHLDQGEEGDIGFFRGVFKSFATTNVRRMLINKGA 240

Query: 181 QLHPTEVCPYCKAKLWSMLLANMIPKSASCRLGSYEECVEYYVCLNGHMLGICTLLPLSD 240
           QLHPTEVCPYCKA+LWSML ANMIP++ASCRLGSYEECV+Y+VCLNGHM+GICTLLPLSD
Sbjct: 241 QLHPTEVCPYCKARLWSMLQANMIPQTASCRLGSYEECVDYHVCLNGHMVGICTLLPLSD 300

Query: 241 SEEASEKE 248
           SE ASEKE
Sbjct: 301 SEGASEKE 308


>Medtr6g013530.4 | circadian clock coupling factor ZGT | HC |
           chr6:4353543-4357088 | 20130731
          Length = 251

 Score =  465 bits (1197), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 215/248 (86%), Positives = 236/248 (95%)

Query: 1   MILTKQYRCVHSASCHCTKGHLSEDVIFLVFHHLNWNPKLIAALSCVCKWFDDLAKRVLW 60
           MI+TKQYRCVHS+SC CTKGHLSED IFLVF++LNWNPKLIA LSCVCKWFDDLAKRVLW
Sbjct: 4   MIITKQYRCVHSSSCQCTKGHLSEDAIFLVFNNLNWNPKLIATLSCVCKWFDDLAKRVLW 63

Query: 61  KEFCLTRAPKMMLDLHSSRSHSVDGSWRALGKLLIYCSGCKKGGLFNNVQVPGHFVHRTR 120
           KEFC TRAPKMM+DL +S +HS+DG+W ALGKLLI+CSGCKKGGLF NV +PGHFV+RTR
Sbjct: 64  KEFCRTRAPKMMIDLQTSGTHSIDGNWSALGKLLIHCSGCKKGGLFKNVHIPGHFVYRTR 123

Query: 121 FSKTSGKSFLLPQCTNDILYVSDPCEHLDQGEEGDLGFFRGIFKSFATSNVRRMLINKGA 180
           FSKTSGKSFLLPQC NDILYVSDPCEHLDQGEEGD+GFFRG+FKSFAT+NVRRMLINKGA
Sbjct: 124 FSKTSGKSFLLPQCINDILYVSDPCEHLDQGEEGDIGFFRGVFKSFATTNVRRMLINKGA 183

Query: 181 QLHPTEVCPYCKAKLWSMLLANMIPKSASCRLGSYEECVEYYVCLNGHMLGICTLLPLSD 240
           QLHPTEVCPYCKA+LWSML ANMIP++ASCRLGSYEECV+Y+VCLNGHM+GICTLLPLSD
Sbjct: 184 QLHPTEVCPYCKARLWSMLQANMIPQTASCRLGSYEECVDYHVCLNGHMVGICTLLPLSD 243

Query: 241 SEEASEKE 248
           SE ASEKE
Sbjct: 244 SEGASEKE 251


>Medtr7g012790.3 | circadian clock coupling factor ZGT | HC |
           chr7:3500195-3504070 | 20130731
          Length = 250

 Score =  436 bits (1121), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 203/250 (81%), Positives = 227/250 (90%), Gaps = 2/250 (0%)

Query: 1   MILTKQYRCVHSASCHCTKGHLSEDVIFLVFHHLNWNPKLIAALSCVCKWFDDLAKRVLW 60
           MI+TKQYRC+HSASC C+KGHLSED IFLVFH+L WNPKLIAALSCVCKWFDDLAKRVLW
Sbjct: 1   MIITKQYRCIHSASCQCSKGHLSEDAIFLVFHNLKWNPKLIAALSCVCKWFDDLAKRVLW 60

Query: 61  KEFCLTRAPKMMLDLHSSRSHSVDGSWRALGKLLIYCSGCKKGGLFNNVQ--VPGHFVHR 118
           KEFC TRAPKM+ DL S+ SH VDG+WRALGKLL YCSGC KGGLF N+Q  +PGHFV++
Sbjct: 61  KEFCRTRAPKMLCDLQSTGSHVVDGNWRALGKLLTYCSGCTKGGLFKNIQNQIPGHFVYQ 120

Query: 119 TRFSKTSGKSFLLPQCTNDILYVSDPCEHLDQGEEGDLGFFRGIFKSFATSNVRRMLINK 178
           TRFS+TSGKSFLLPQC  D+LYVSDPCEHLDQGEEGD+GFFRG+FKSFATS VR+MLI+K
Sbjct: 121 TRFSRTSGKSFLLPQCRTDVLYVSDPCEHLDQGEEGDIGFFRGVFKSFATSKVRKMLISK 180

Query: 179 GAQLHPTEVCPYCKAKLWSMLLANMIPKSASCRLGSYEECVEYYVCLNGHMLGICTLLPL 238
           GA+LH TEVCPYCKAKLWSM  A MIP+SASCRLGSYE+ +EY+VCLNGH++GICTLLPL
Sbjct: 181 GAKLHQTEVCPYCKAKLWSMQQAKMIPQSASCRLGSYEDDIEYFVCLNGHLIGICTLLPL 240

Query: 239 SDSEEASEKE 248
           SDSEEA E E
Sbjct: 241 SDSEEAPELE 250


>Medtr7g012790.1 | circadian clock coupling factor ZGT | HC |
           chr7:3500186-3504137 | 20130731
          Length = 250

 Score =  436 bits (1121), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 203/250 (81%), Positives = 227/250 (90%), Gaps = 2/250 (0%)

Query: 1   MILTKQYRCVHSASCHCTKGHLSEDVIFLVFHHLNWNPKLIAALSCVCKWFDDLAKRVLW 60
           MI+TKQYRC+HSASC C+KGHLSED IFLVFH+L WNPKLIAALSCVCKWFDDLAKRVLW
Sbjct: 1   MIITKQYRCIHSASCQCSKGHLSEDAIFLVFHNLKWNPKLIAALSCVCKWFDDLAKRVLW 60

Query: 61  KEFCLTRAPKMMLDLHSSRSHSVDGSWRALGKLLIYCSGCKKGGLFNNVQ--VPGHFVHR 118
           KEFC TRAPKM+ DL S+ SH VDG+WRALGKLL YCSGC KGGLF N+Q  +PGHFV++
Sbjct: 61  KEFCRTRAPKMLCDLQSTGSHVVDGNWRALGKLLTYCSGCTKGGLFKNIQNQIPGHFVYQ 120

Query: 119 TRFSKTSGKSFLLPQCTNDILYVSDPCEHLDQGEEGDLGFFRGIFKSFATSNVRRMLINK 178
           TRFS+TSGKSFLLPQC  D+LYVSDPCEHLDQGEEGD+GFFRG+FKSFATS VR+MLI+K
Sbjct: 121 TRFSRTSGKSFLLPQCRTDVLYVSDPCEHLDQGEEGDIGFFRGVFKSFATSKVRKMLISK 180

Query: 179 GAQLHPTEVCPYCKAKLWSMLLANMIPKSASCRLGSYEECVEYYVCLNGHMLGICTLLPL 238
           GA+LH TEVCPYCKAKLWSM  A MIP+SASCRLGSYE+ +EY+VCLNGH++GICTLLPL
Sbjct: 181 GAKLHQTEVCPYCKAKLWSMQQAKMIPQSASCRLGSYEDDIEYFVCLNGHLIGICTLLPL 240

Query: 239 SDSEEASEKE 248
           SDSEEA E E
Sbjct: 241 SDSEEAPELE 250


>Medtr7g012790.4 | circadian clock coupling factor ZGT | HC |
           chr7:3500186-3503074 | 20130731
          Length = 250

 Score =  436 bits (1121), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 203/250 (81%), Positives = 227/250 (90%), Gaps = 2/250 (0%)

Query: 1   MILTKQYRCVHSASCHCTKGHLSEDVIFLVFHHLNWNPKLIAALSCVCKWFDDLAKRVLW 60
           MI+TKQYRC+HSASC C+KGHLSED IFLVFH+L WNPKLIAALSCVCKWFDDLAKRVLW
Sbjct: 1   MIITKQYRCIHSASCQCSKGHLSEDAIFLVFHNLKWNPKLIAALSCVCKWFDDLAKRVLW 60

Query: 61  KEFCLTRAPKMMLDLHSSRSHSVDGSWRALGKLLIYCSGCKKGGLFNNVQ--VPGHFVHR 118
           KEFC TRAPKM+ DL S+ SH VDG+WRALGKLL YCSGC KGGLF N+Q  +PGHFV++
Sbjct: 61  KEFCRTRAPKMLCDLQSTGSHVVDGNWRALGKLLTYCSGCTKGGLFKNIQNQIPGHFVYQ 120

Query: 119 TRFSKTSGKSFLLPQCTNDILYVSDPCEHLDQGEEGDLGFFRGIFKSFATSNVRRMLINK 178
           TRFS+TSGKSFLLPQC  D+LYVSDPCEHLDQGEEGD+GFFRG+FKSFATS VR+MLI+K
Sbjct: 121 TRFSRTSGKSFLLPQCRTDVLYVSDPCEHLDQGEEGDIGFFRGVFKSFATSKVRKMLISK 180

Query: 179 GAQLHPTEVCPYCKAKLWSMLLANMIPKSASCRLGSYEECVEYYVCLNGHMLGICTLLPL 238
           GA+LH TEVCPYCKAKLWSM  A MIP+SASCRLGSYE+ +EY+VCLNGH++GICTLLPL
Sbjct: 181 GAKLHQTEVCPYCKAKLWSMQQAKMIPQSASCRLGSYEDDIEYFVCLNGHLIGICTLLPL 240

Query: 239 SDSEEASEKE 248
           SDSEEA E E
Sbjct: 241 SDSEEAPELE 250


>Medtr7g012790.5 | circadian clock coupling factor ZGT | HC |
           chr7:3500186-3503074 | 20130731
          Length = 250

 Score =  436 bits (1121), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 203/250 (81%), Positives = 227/250 (90%), Gaps = 2/250 (0%)

Query: 1   MILTKQYRCVHSASCHCTKGHLSEDVIFLVFHHLNWNPKLIAALSCVCKWFDDLAKRVLW 60
           MI+TKQYRC+HSASC C+KGHLSED IFLVFH+L WNPKLIAALSCVCKWFDDLAKRVLW
Sbjct: 1   MIITKQYRCIHSASCQCSKGHLSEDAIFLVFHNLKWNPKLIAALSCVCKWFDDLAKRVLW 60

Query: 61  KEFCLTRAPKMMLDLHSSRSHSVDGSWRALGKLLIYCSGCKKGGLFNNVQ--VPGHFVHR 118
           KEFC TRAPKM+ DL S+ SH VDG+WRALGKLL YCSGC KGGLF N+Q  +PGHFV++
Sbjct: 61  KEFCRTRAPKMLCDLQSTGSHVVDGNWRALGKLLTYCSGCTKGGLFKNIQNQIPGHFVYQ 120

Query: 119 TRFSKTSGKSFLLPQCTNDILYVSDPCEHLDQGEEGDLGFFRGIFKSFATSNVRRMLINK 178
           TRFS+TSGKSFLLPQC  D+LYVSDPCEHLDQGEEGD+GFFRG+FKSFATS VR+MLI+K
Sbjct: 121 TRFSRTSGKSFLLPQCRTDVLYVSDPCEHLDQGEEGDIGFFRGVFKSFATSKVRKMLISK 180

Query: 179 GAQLHPTEVCPYCKAKLWSMLLANMIPKSASCRLGSYEECVEYYVCLNGHMLGICTLLPL 238
           GA+LH TEVCPYCKAKLWSM  A MIP+SASCRLGSYE+ +EY+VCLNGH++GICTLLPL
Sbjct: 181 GAKLHQTEVCPYCKAKLWSMQQAKMIPQSASCRLGSYEDDIEYFVCLNGHLIGICTLLPL 240

Query: 239 SDSEEASEKE 248
           SDSEEA E E
Sbjct: 241 SDSEEAPELE 250


>Medtr7g012790.2 | circadian clock coupling factor ZGT | HC |
           chr7:3500346-3504029 | 20130731
          Length = 202

 Score =  335 bits (858), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 166/248 (66%), Positives = 184/248 (74%), Gaps = 46/248 (18%)

Query: 1   MILTKQYRCVHSASCHCTKGHLSEDVIFLVFHHLNWNPKLIAALSCVCKWFDDLAKRVLW 60
           MI+TKQYRC+HSASC C+KGHLSED IFLVFH+L WNPKLIAALSCVCKWFDDLAKRVLW
Sbjct: 1   MIITKQYRCIHSASCQCSKGHLSEDAIFLVFHNLKWNPKLIAALSCVCKWFDDLAKRVLW 60

Query: 61  KEFCLTRAPKMMLDLHSSRSHSVDGSWRALGKLLIYCSGCKKGGLFNNVQVPGHFVHRTR 120
           KEFC TRAPKM+ DL S+ SH VDG+WRALGKLL YCSGC K                  
Sbjct: 61  KEFCRTRAPKMLCDLQSTGSHVVDGNWRALGKLLTYCSGCTK------------------ 102

Query: 121 FSKTSGKSFLLPQCTNDILYVSDPCEHLDQGEEGDLGFFRGIFKSFATSNVRRMLINKGA 180
                                       DQGEEGD+GFFRG+FKSFATS VR+MLI+KGA
Sbjct: 103 ----------------------------DQGEEGDIGFFRGVFKSFATSKVRKMLISKGA 134

Query: 181 QLHPTEVCPYCKAKLWSMLLANMIPKSASCRLGSYEECVEYYVCLNGHMLGICTLLPLSD 240
           +LH TEVCPYCKAKLWSM  A MIP+SASCRLGSYE+ +EY+VCLNGH++GICTLLPLSD
Sbjct: 135 KLHQTEVCPYCKAKLWSMQQAKMIPQSASCRLGSYEDDIEYFVCLNGHLIGICTLLPLSD 194

Query: 241 SEEASEKE 248
           SEEA E E
Sbjct: 195 SEEAPELE 202