Miyakogusa Predicted Gene

Lj2g3v1069200.4

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1069200.4 Non Characterized Hit- tr|I1N691|I1N691_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,89.75,0,RING/U-box,NULL; Modified RING finger domain,U box
domain; seg,NULL; no description,Zinc finger, RIN,CUFF.36534.4
         (793 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g013690.1 | ubiquitin conjugation factor E4, putative | HC...  1379   0.0  

>Medtr6g013690.1 | ubiquitin conjugation factor E4, putative | HC |
            chr6:4310064-4300709 | 20130731
          Length = 1047

 Score = 1379 bits (3568), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 670/793 (84%), Positives = 711/793 (89%), Gaps = 13/793 (1%)

Query: 1    MNGRAIEMTSILGPFFHVSALPDQTFFRSLPDVGQQCFSDSSTRRQADLVSSFSTIKNVM 60
            MNGRAIEMTSILGPFFHVSALPDQ FF+S PD+GQQCFSD+STRR ADL+SSF+TIK VM
Sbjct: 268  MNGRAIEMTSILGPFFHVSALPDQNFFKSSPDIGQQCFSDASTRRPADLLSSFTTIKTVM 327

Query: 61   NNXXXXXXXXXXXXXXXXDTRENVLEYLAEVININASRAHIQVDPITCASSGMFVNLSAV 120
            N                 DTRENVLEYLAEVIN+NASRA +QVDPIT ASSGMFV+LSAV
Sbjct: 328  NTLYDGLSEALRILLKSTDTRENVLEYLAEVINLNASRAQMQVDPITSASSGMFVSLSAV 387

Query: 121  MLRLCEPFLDANLTKRDKIDPNYVHYSNRLKLSGLTALHASSEEITEWLNSKNPSKAGGI 180
            MLRLCEPFLDANLTKRDKID  YVH+SNRL LSGLTALHASSEE+ EWL SKNP+ A  I
Sbjct: 388  MLRLCEPFLDANLTKRDKIDAKYVHHSNRLNLSGLTALHASSEEVAEWLKSKNPATAVDI 447

Query: 181  DQCNDDKKRXXXXXXXXXXXXXXXXXXXKENSARGQKSKYSFICECFFMTARVLNLGLLK 240
            +Q ND  KR                     + +     KYSFICECFFMTARVLNLGLLK
Sbjct: 448  NQYNDGGKRLQESQEA------------SSSGSNNASPKYSFICECFFMTARVLNLGLLK 495

Query: 241  AFSDFKHLVQDISRSEDALSTLKGMQGHSPSPQLELDISRLEKELELYSQEKLCYEAQIL 300
            AFSD+KHL QDISRSED LSTLK MQ  SPSPQL LDI+RLEKELELYSQEKLCYEAQIL
Sbjct: 496  AFSDYKHLAQDISRSEDTLSTLKTMQEQSPSPQLALDITRLEKELELYSQEKLCYEAQIL 555

Query: 301  RDNTLIQNALTFYRLMIVWLVGLVGGFKMPLPQTCPMEFATMPEHFVEDAMELLIFASRI 360
            RDNTLIQNAL+FYRLMIVWLVGLVGGFKMPLP  CPMEF+TMPEHFVEDA+ELLIFASRI
Sbjct: 556  RDNTLIQNALSFYRLMIVWLVGLVGGFKMPLPNPCPMEFSTMPEHFVEDALELLIFASRI 615

Query: 361  PRALEGVVLDEFMNFIIMFMASPDFIKNPYLRAKMVEVLNCWMPRTSGSSATATLFEGHQ 420
            P+AL+GVVLDEFMNFIIMFM SPDFIKNPYLRAKMVEVLN WMPR SGSSAT+TLFEGHQ
Sbjct: 616  PKALDGVVLDEFMNFIIMFMGSPDFIKNPYLRAKMVEVLNNWMPRRSGSSATSTLFEGHQ 675

Query: 421  LSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWKVPSHRNAWRQIAKEE 480
            LSL+YLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLW VPSHR+AWRQIAKEE
Sbjct: 676  LSLQYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWNVPSHRSAWRQIAKEE 735

Query: 481  EKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTAEWERRPVQERQERTRLFHS 540
            EKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTAEWERRPVQERQERTRLFHS
Sbjct: 736  EKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTAEWERRPVQERQERTRLFHS 795

Query: 541  QENIIRIDMKLANEDVSMLAFTSEQITVPFLLPEMVERVASMLNYFLLQLVGPQRKSLSL 600
            QENIIRIDMKLANEDVSMLAFT+EQIT PFLLPEMV+RVASMLNYFLLQLVGPQRKSLSL
Sbjct: 796  QENIIRIDMKLANEDVSMLAFTTEQITAPFLLPEMVDRVASMLNYFLLQLVGPQRKSLSL 855

Query: 601  KDPEKYEFRPKDLLKQIVHIYIHLARGDTNAIFPAAISKDGRSYNDQLFSAGADVLRRIG 660
            KDPEKYEFRPK LLKQIVH+Y+HLARGDTN+IFP+AISKDGRSYNDQLFS+ ADVLRRIG
Sbjct: 856  KDPEKYEFRPKHLLKQIVHVYVHLARGDTNSIFPSAISKDGRSYNDQLFSSAADVLRRIG 915

Query: 661  EDPKVIQEFIQLGAKAKVAASEAMDAEATLGEIPDEFLDPIQYTLMKDPVILPSSRITVD 720
            ED ++IQEFIQLGAKAKVAASEAM+AE TLGEIPDEFLDPIQYTLMKDPVILPSSRITVD
Sbjct: 916  EDGRIIQEFIQLGAKAKVAASEAMEAEDTLGEIPDEFLDPIQYTLMKDPVILPSSRITVD 975

Query: 721  RPVIQRHLLSDASDPFNRSHLTADMLIPDVELKARIEEFVRSQEMKKHGEGLSIQSSSKA 780
            RPVIQRHLLSD+SDPFNRSHLTADMLIPDVELKA+IEEF+RSQEMKKHGE ++IQ SSKA
Sbjct: 976  RPVIQRHLLSDSSDPFNRSHLTADMLIPDVELKAKIEEFIRSQEMKKHGESINIQ-SSKA 1034

Query: 781  TIQTTNGEKMLID 793
            TIQTT+  +MLID
Sbjct: 1035 TIQTTDTSEMLID 1047