Miyakogusa Predicted Gene

Lj2g3v1068770.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1068770.1 Non Characterized Hit- tr|I1KWA8|I1KWA8_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,61.84,6e-16,
,CUFF.36126.1
         (104 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g013030.1 | cyclin-dependent kinase | HC | chr6:4071594-40...   159   6e-40
Medtr7g011800.1 | cyclin-dependent kinase C | HC | chr7:3254114-...    78   2e-15

>Medtr6g013030.1 | cyclin-dependent kinase | HC |
           chr6:4071594-4066818 | 20130731
          Length = 612

 Score =  159 bits (402), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 82/109 (75%), Positives = 87/109 (79%), Gaps = 5/109 (4%)

Query: 1   MDAMSETSQLANVADGNGYSVPLQGSG-SNNFTWVKRRKPDASSTLSDGSRSKISALDPN 59
           M+AM ETSQ  NVADGNGYSVP+   G SN+F+W KRRK DASSTLSDGSRSKISALDPN
Sbjct: 496 MNAMLETSQKLNVADGNGYSVPVNVKGVSNDFSWTKRRKQDASSTLSDGSRSKISALDPN 555

Query: 60  FAKGTYDLSKQRVSMDFDPKEL----GHREEQGALWNDGTRRIVRKSRF 104
           FAKGTYDL  QRVSMDFDPKEL      +EE GA WNDG RR  RKSRF
Sbjct: 556 FAKGTYDLPNQRVSMDFDPKELMNTQAQKEEIGAYWNDGVRRAARKSRF 604


>Medtr7g011800.1 | cyclin-dependent kinase C | HC |
           chr7:3254114-3248769 | 20130731
          Length = 690

 Score = 77.8 bits (190), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 40/66 (60%), Positives = 49/66 (74%), Gaps = 1/66 (1%)

Query: 6   ETSQLANVADG-NGYSVPLQGSGSNNFTWVKRRKPDASSTLSDGSRSKISALDPNFAKGT 64
           + +Q +N  +G + YS P+  SGS+ F W K RK DASS LSDGSRSKISA+DP FAKGT
Sbjct: 516 QAAQKSNAYNGYSAYSGPVPVSGSSGFKWAKSRKLDASSILSDGSRSKISAMDPTFAKGT 575

Query: 65  YDLSKQ 70
           YDL+K 
Sbjct: 576 YDLTKH 581