Miyakogusa Predicted Gene

Lj2g3v1068710.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1068710.1 Non Characterized Hit- tr|F6Z6E4|F6Z6E4_CIOIN
Uncharacterized protein OS=Ciona intestinalis
GN=Cin.3,32.12,2e-18,t-snare proteins,t-SNARE; SNARE PROTEIN,
PUTATIVE,NULL; VESICLE TRANSPORT V-SNARE PROTEIN
VTI1-RELAT,CUFF.36190.1
         (175 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g012860.1 | vesicle transport V-SNARE protein amine-termin...   328   1e-90
Medtr7g011570.2 | vesicle transport V-SNARE protein amine-termin...   303   7e-83
Medtr7g011570.1 | vesicle transport V-SNARE protein amine-termin...   302   1e-82
Medtr3g037380.3 | vesicle transport V-SNARE protein | HC | chr3:...   265   2e-71
Medtr3g037380.1 | vesicle transport V-SNARE protein | HC | chr3:...   265   2e-71
Medtr5g042530.1 | vesicle transport V-SNARE protein amine-termin...   242   1e-64
Medtr3g037380.2 | vesicle transport V-SNARE protein | HC | chr3:...   177   3e-45
Medtr5g042530.2 | vesicle transport V-SNARE protein amine-termin...   166   8e-42

>Medtr6g012860.1 | vesicle transport V-SNARE protein amine-terminal
           protein | HC | chr6:4001547-3996927 | 20130731
          Length = 221

 Score =  328 bits (841), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 157/175 (89%), Positives = 170/175 (97%)

Query: 1   MSNVFEGYERQYCELSANLSKKCTAAGSLNGEQKKQKVSEIKAGIDEAEALIRKMDLEAR 60
           MSNVFEGYERQYCELSANLSKKCTAA +LNGEQKKQKVSE+K+GIDEAEALIRKMDLEAR
Sbjct: 1   MSNVFEGYERQYCELSANLSKKCTAATALNGEQKKQKVSEVKSGIDEAEALIRKMDLEAR 60

Query: 61  SLQPNVRAVLLAKLREYKSDLNNLKSEVKKIVSGNLNPSARDELLESGMADTLTASSDQR 120
           S+QPN++ VLLAKLREYKSDLNNLKSEVKKIVSGNLNPSARDELLESGMADT+TAS+DQR
Sbjct: 61  SMQPNIKGVLLAKLREYKSDLNNLKSEVKKIVSGNLNPSARDELLESGMADTMTASADQR 120

Query: 121 SRLMMSTDRLNKTGDRVQQSRKTMLETEELGVSILQDLHSQRQSLLHAHTTLHGV 175
           +RLM ST+RLNKTG+RV+ SR+TMLETEELGVSILQDLHSQRQSLLHAH TLHGV
Sbjct: 121 TRLMTSTERLNKTGERVKDSRRTMLETEELGVSILQDLHSQRQSLLHAHNTLHGV 175


>Medtr7g011570.2 | vesicle transport V-SNARE protein amine-terminal
           protein | HC | chr7:3142862-3137623 | 20130731
          Length = 221

 Score =  303 bits (775), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 144/175 (82%), Positives = 160/175 (91%)

Query: 1   MSNVFEGYERQYCELSANLSKKCTAAGSLNGEQKKQKVSEIKAGIDEAEALIRKMDLEAR 60
           MS VFEGYERQYCELS+ LSK CTAA +LNGEQKKQ +S+IKAGIDEAEALIRKMDLEAR
Sbjct: 1   MSTVFEGYERQYCELSSKLSKLCTAAAALNGEQKKQNISDIKAGIDEAEALIRKMDLEAR 60

Query: 61  SLQPNVRAVLLAKLREYKSDLNNLKSEVKKIVSGNLNPSARDELLESGMADTLTASSDQR 120
           SLQPN++ VLLAKLREYKSDLNN KSE+KK+VSGN+NPSARD LLESGMAD +T S+DQR
Sbjct: 61  SLQPNIKGVLLAKLREYKSDLNNNKSELKKLVSGNMNPSARDMLLESGMADAMTVSADQR 120

Query: 121 SRLMMSTDRLNKTGDRVQQSRKTMLETEELGVSILQDLHSQRQSLLHAHTTLHGV 175
            RLM ST+RLNK+ DR++ SR+TMLETEELGVSILQDLHSQRQSLLHAH TLHGV
Sbjct: 121 DRLMFSTERLNKSSDRIKDSRRTMLETEELGVSILQDLHSQRQSLLHAHDTLHGV 175


>Medtr7g011570.1 | vesicle transport V-SNARE protein amine-terminal
           protein | HC | chr7:3144061-3137751 | 20130731
          Length = 303

 Score =  302 bits (773), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 144/175 (82%), Positives = 160/175 (91%)

Query: 1   MSNVFEGYERQYCELSANLSKKCTAAGSLNGEQKKQKVSEIKAGIDEAEALIRKMDLEAR 60
           MS VFEGYERQYCELS+ LSK CTAA +LNGEQKKQ +S+IKAGIDEAEALIRKMDLEAR
Sbjct: 83  MSTVFEGYERQYCELSSKLSKLCTAAAALNGEQKKQNISDIKAGIDEAEALIRKMDLEAR 142

Query: 61  SLQPNVRAVLLAKLREYKSDLNNLKSEVKKIVSGNLNPSARDELLESGMADTLTASSDQR 120
           SLQPN++ VLLAKLREYKSDLNN KSE+KK+VSGN+NPSARD LLESGMAD +T S+DQR
Sbjct: 143 SLQPNIKGVLLAKLREYKSDLNNNKSELKKLVSGNMNPSARDMLLESGMADAMTVSADQR 202

Query: 121 SRLMMSTDRLNKTGDRVQQSRKTMLETEELGVSILQDLHSQRQSLLHAHTTLHGV 175
            RLM ST+RLNK+ DR++ SR+TMLETEELGVSILQDLHSQRQSLLHAH TLHGV
Sbjct: 203 DRLMFSTERLNKSSDRIKDSRRTMLETEELGVSILQDLHSQRQSLLHAHDTLHGV 257


>Medtr3g037380.3 | vesicle transport V-SNARE protein | HC |
           chr3:13724559-13727810 | 20130731
          Length = 221

 Score =  265 bits (676), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 125/175 (71%), Positives = 155/175 (88%)

Query: 1   MSNVFEGYERQYCELSANLSKKCTAAGSLNGEQKKQKVSEIKAGIDEAEALIRKMDLEAR 60
           MS VF+GYERQYCELSA LS++CTAA +L+GEQKKQK+SEIKAG+++A+ LIRKMDLEAR
Sbjct: 1   MSEVFDGYERQYCELSAILSRQCTAASALDGEQKKQKLSEIKAGLEDADTLIRKMDLEAR 60

Query: 61  SLQPNVRAVLLAKLREYKSDLNNLKSEVKKIVSGNLNPSARDELLESGMADTLTASSDQR 120
           SLQP+++A LLAKLREYK+DLNNLK+EVK++ S N + +ARDELLE G  D+L  S+DQ+
Sbjct: 61  SLQPSMKATLLAKLREYKTDLNNLKNEVKRVASANASITARDELLELGRIDSLAVSNDQK 120

Query: 121 SRLMMSTDRLNKTGDRVQQSRKTMLETEELGVSILQDLHSQRQSLLHAHTTLHGV 175
            RL+M+T+RLN++ DR+  SRKT+LETEELGVSILQDLH QRQSLLHAH +LHGV
Sbjct: 121 GRLLMTTERLNQSTDRLTNSRKTLLETEELGVSILQDLHQQRQSLLHAHKSLHGV 175


>Medtr3g037380.1 | vesicle transport V-SNARE protein | HC |
           chr3:13724518-13727810 | 20130731
          Length = 221

 Score =  265 bits (676), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 125/175 (71%), Positives = 155/175 (88%)

Query: 1   MSNVFEGYERQYCELSANLSKKCTAAGSLNGEQKKQKVSEIKAGIDEAEALIRKMDLEAR 60
           MS VF+GYERQYCELSA LS++CTAA +L+GEQKKQK+SEIKAG+++A+ LIRKMDLEAR
Sbjct: 1   MSEVFDGYERQYCELSAILSRQCTAASALDGEQKKQKLSEIKAGLEDADTLIRKMDLEAR 60

Query: 61  SLQPNVRAVLLAKLREYKSDLNNLKSEVKKIVSGNLNPSARDELLESGMADTLTASSDQR 120
           SLQP+++A LLAKLREYK+DLNNLK+EVK++ S N + +ARDELLE G  D+L  S+DQ+
Sbjct: 61  SLQPSMKATLLAKLREYKTDLNNLKNEVKRVASANASITARDELLELGRIDSLAVSNDQK 120

Query: 121 SRLMMSTDRLNKTGDRVQQSRKTMLETEELGVSILQDLHSQRQSLLHAHTTLHGV 175
            RL+M+T+RLN++ DR+  SRKT+LETEELGVSILQDLH QRQSLLHAH +LHGV
Sbjct: 121 GRLLMTTERLNQSTDRLTNSRKTLLETEELGVSILQDLHQQRQSLLHAHKSLHGV 175


>Medtr5g042530.1 | vesicle transport V-SNARE protein amine-terminal
           protein | HC | chr5:18692488-18686987 | 20130731
          Length = 222

 Score =  242 bits (618), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 118/176 (67%), Positives = 147/176 (83%), Gaps = 1/176 (0%)

Query: 1   MSNVFEGYERQYCELSANLSKKCTAAGSL-NGEQKKQKVSEIKAGIDEAEALIRKMDLEA 59
           MS VFEGYERQYC+LSANLS+KCT+   L + E+K QK SEIK G+D+A+ LIRKMDLEA
Sbjct: 1   MSQVFEGYERQYCDLSANLSRKCTSTSLLSDQEEKLQKFSEIKTGLDDADVLIRKMDLEA 60

Query: 60  RSLQPNVRAVLLAKLREYKSDLNNLKSEVKKIVSGNLNPSARDELLESGMADTLTASSDQ 119
           RSLQP+V+A+LLAKLREYKSDLNNLK E K++ S   + +ARD+LLE+G ADT  AS+DQ
Sbjct: 61  RSLQPSVKAMLLAKLREYKSDLNNLKKEFKRLTSPTADQAARDDLLETGRADTHLASADQ 120

Query: 120 RSRLMMSTDRLNKTGDRVQQSRKTMLETEELGVSILQDLHSQRQSLLHAHTTLHGV 175
           R RL MS +RLN++ DR+++S +T+LETEELGVSILQDLH QR++LL +H  LHGV
Sbjct: 121 RERLTMSVERLNQSSDRIRESHRTVLETEELGVSILQDLHQQRETLLSSHKRLHGV 176


>Medtr3g037380.2 | vesicle transport V-SNARE protein | HC |
           chr3:13724615-13727810 | 20130731
          Length = 167

 Score =  177 bits (450), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 85/121 (70%), Positives = 105/121 (86%)

Query: 55  MDLEARSLQPNVRAVLLAKLREYKSDLNNLKSEVKKIVSGNLNPSARDELLESGMADTLT 114
           MDLEARSLQP+++A LLAKLREYK+DLNNLK+EVK++ S N + +ARDELLE G  D+L 
Sbjct: 1   MDLEARSLQPSMKATLLAKLREYKTDLNNLKNEVKRVASANASITARDELLELGRIDSLA 60

Query: 115 ASSDQRSRLMMSTDRLNKTGDRVQQSRKTMLETEELGVSILQDLHSQRQSLLHAHTTLHG 174
            S+DQ+ RL+M+T+RLN++ DR+  SRKT+LETEELGVSILQDLH QRQSLLHAH +LHG
Sbjct: 61  VSNDQKGRLLMTTERLNQSTDRLTNSRKTLLETEELGVSILQDLHQQRQSLLHAHKSLHG 120

Query: 175 V 175
           V
Sbjct: 121 V 121


>Medtr5g042530.2 | vesicle transport V-SNARE protein amine-terminal
           protein | HC | chr5:18692446-18686987 | 20130731
          Length = 167

 Score =  166 bits (421), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 81/121 (66%), Positives = 102/121 (84%)

Query: 55  MDLEARSLQPNVRAVLLAKLREYKSDLNNLKSEVKKIVSGNLNPSARDELLESGMADTLT 114
           MDLEARSLQP+V+A+LLAKLREYKSDLNNLK E K++ S   + +ARD+LLE+G ADT  
Sbjct: 1   MDLEARSLQPSVKAMLLAKLREYKSDLNNLKKEFKRLTSPTADQAARDDLLETGRADTHL 60

Query: 115 ASSDQRSRLMMSTDRLNKTGDRVQQSRKTMLETEELGVSILQDLHSQRQSLLHAHTTLHG 174
           AS+DQR RL MS +RLN++ DR+++S +T+LETEELGVSILQDLH QR++LL +H  LHG
Sbjct: 61  ASADQRERLTMSVERLNQSSDRIRESHRTVLETEELGVSILQDLHQQRETLLSSHKRLHG 120

Query: 175 V 175
           V
Sbjct: 121 V 121