Miyakogusa Predicted Gene
- Lj2g3v1068660.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1068660.1 Non Characterized Hit- tr|I3T8V3|I3T8V3_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,60.92,3e-18,DUF1997,Protein of unknown function
DUF1997,gene.g40720.t1.1
(139 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr6g012830.2 | DUF1997 family protein | HC | chr6:3985782-398... 137 3e-33
Medtr6g012830.1 | DUF1997 family protein | HC | chr6:3985739-398... 124 4e-29
Medtr6g012830.3 | DUF1997 family protein | HC | chr6:3985739-398... 124 4e-29
>Medtr6g012830.2 | DUF1997 family protein | HC |
chr6:3985782-3988159 | 20130731
Length = 209
Score = 137 bits (345), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/144 (48%), Positives = 86/144 (59%), Gaps = 29/144 (20%)
Query: 1 MIRNEKKSSFRYRSTVDVPLYELPG-----------------------------EEWRIK 31
+IRNEK SSF YRS +VP YELPG EEWR++
Sbjct: 33 VIRNEKTSSFSYRSIANVPFYELPGASFDQYMDDRLRVLKAVFPEKGNSKQLNEEEWRVE 92
Query: 32 MPPIQFLFWSFHPAADVRWELQGLSNGIIDPDDFSLDFRSAIYPERMRKSSWLKNQTEMH 91
MP IQ P D RWELQGL++ DP DF+LD R IYPER KSSWLKNQ EM
Sbjct: 93 MPSIQCFILKVQPKVDTRWELQGLNSLYNDPYDFNLDVRGIIYPERKGKSSWLKNQMEMK 152
Query: 92 ISFSVTPAITLIPENIMQDAIELV 115
I+F+V+P +T +PE+I++DA+ELV
Sbjct: 153 INFTVSPTMTFVPEHILKDALELV 176
>Medtr6g012830.1 | DUF1997 family protein | HC |
chr6:3985739-3988351 | 20130731
Length = 237
Score = 124 bits (310), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/172 (41%), Positives = 87/172 (50%), Gaps = 57/172 (33%)
Query: 1 MIRNEKKSSFRYRSTVDVPLYELPG-----------------------------EEWRIK 31
+IRNEK SSF YRS +VP YELPG EEWR++
Sbjct: 33 VIRNEKTSSFSYRSIANVPFYELPGASFDQYMDDRLRVLKAVFPEKGNSKQLNEEEWRVE 92
Query: 32 MPPIQFLFWSFHPAADVR----------------------------WELQGLSNGIIDPD 63
MP IQ P DVR WELQGL++ DP
Sbjct: 93 MPSIQCFILKVQPKVDVRLRIKSNGEDYPSHVPHHISKILELHFTRWELQGLNSLYNDPY 152
Query: 64 DFSLDFRSAIYPERMRKSSWLKNQTEMHISFSVTPAITLIPENIMQDAIELV 115
DF+LD R IYPER KSSWLKNQ EM I+F+V+P +T +PE+I++DA+ELV
Sbjct: 153 DFNLDVRGIIYPERKGKSSWLKNQMEMKINFTVSPTMTFVPEHILKDALELV 204
>Medtr6g012830.3 | DUF1997 family protein | HC |
chr6:3985739-3987665 | 20130731
Length = 204
Score = 124 bits (310), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/172 (41%), Positives = 87/172 (50%), Gaps = 57/172 (33%)
Query: 1 MIRNEKKSSFRYRSTVDVPLYELPG-----------------------------EEWRIK 31
+IRNEK SSF YRS +VP YELPG EEWR++
Sbjct: 33 VIRNEKTSSFSYRSIANVPFYELPGASFDQYMDDRLRVLKAVFPEKGNSKQLNEEEWRVE 92
Query: 32 MPPIQFLFWSFHPAADVR----------------------------WELQGLSNGIIDPD 63
MP IQ P DVR WELQGL++ DP
Sbjct: 93 MPSIQCFILKVQPKVDVRLRIKSNGEDYPSHVPHHISKILELHFTRWELQGLNSLYNDPY 152
Query: 64 DFSLDFRSAIYPERMRKSSWLKNQTEMHISFSVTPAITLIPENIMQDAIELV 115
DF+LD R IYPER KSSWLKNQ EM I+F+V+P +T +PE+I++DA+ELV
Sbjct: 153 DFNLDVRGIIYPERKGKSSWLKNQMEMKINFTVSPTMTFVPEHILKDALELV 204