Miyakogusa Predicted Gene

Lj2g3v1058040.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1058040.2 Non Characterized Hit- tr|I3S3D5|I3S3D5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.35,0,no
description,NULL; Trypsin_2,NULL; PDZ_2,PDZ domain; Domain present in
PSD-95, Dlg, and ZO-1/2.,PD,CUFF.36076.2
         (460 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g011810.1 | trypsin-like serine protease | HC | chr6:35243...   689   0.0  
Medtr6g007030.1 | trypsin-like serine protease | HC | chr6:13500...   291   1e-78
Medtr2g019140.1 | protease Do-like protein | HC | chr2:6181839-6...   181   1e-45
Medtr7g113170.1 | trypsin-like serine protease | HC | chr7:46585...   122   9e-28
Medtr2g019140.2 | protease Do-like protein | HC | chr2:6181836-6...   109   5e-24
Medtr7g113170.2 | trypsin-like serine protease | HC | chr7:46585...    95   1e-19
Medtr1g088980.1 | DegP protease | HC | chr1:39969497-39960538 | ...    60   3e-09
Medtr4g106730.1 | serine endopeptidase degp2 protein, putative |...    50   4e-06

>Medtr6g011810.1 | trypsin-like serine protease | HC |
           chr6:3524383-3530604 | 20130731
          Length = 458

 Score =  689 bits (1779), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/463 (76%), Positives = 391/463 (84%), Gaps = 13/463 (2%)

Query: 3   VSACN-LWSPGV---PPQAHRSTVLSRRKICFDGLSCVCRSHSQHFPNDTVSSQPISIS- 57
           VSACN +W   +    PQ   S+VLSRR++C     C   +H    P      QPISIS 
Sbjct: 4   VSACNNMWCMSMLPTTPQKSISSVLSRREVCISSSLC---NHDAIPPQ-----QPISIST 55

Query: 58  RPVQDESQDFEAMLSKEIMSPTRRVLIASLTMFSCFQSSRYLSALALGDPSVTLEQVTPP 117
           R VQDESQD    + K I+SPTRRVL++SLT++S + SSRYLSALALGD SVT+E+VTPP
Sbjct: 56  RTVQDESQDSGNTIKKVIVSPTRRVLMSSLTLYSSYCSSRYLSALALGDTSVTIEEVTPP 115

Query: 118 VFPSGPLFPAEDRVVQLFERNTYSVVNIFDVTLRPQLNVTGVVEIPEGNGSGVVWDDEGH 177
           VF + PLFPAEDR+VQLFE NTYSVVNIFDVTLRPQLNVTGVVEIPEGNGSGVVWD+EGH
Sbjct: 116 VFSTEPLFPAEDRIVQLFESNTYSVVNIFDVTLRPQLNVTGVVEIPEGNGSGVVWDEEGH 175

Query: 178 IVTNYHVIGNALSRNPSSGQVVARVNILASDGVQKNFEATVVGADRLKDLAVLKVEAPED 237
           IVTNYHVIGNALSRNPSSGQVVAR+NILAS+GV KNFE  ++GADRLKDLAVLKV+AP++
Sbjct: 176 IVTNYHVIGNALSRNPSSGQVVARINILASEGVIKNFEGILIGADRLKDLAVLKVDAPKE 235

Query: 238 ILRPIKVGQSSSLKVGQQCLAIGNPFGFDHTLTVGVISGLNRDIFSXXXXXXXXXXXXDA 297
           IL+PI VG+SSSLKVGQQCLAIGNPFGFDHTLTVGVISGLNRDIFS            DA
Sbjct: 236 ILKPINVGESSSLKVGQQCLAIGNPFGFDHTLTVGVISGLNRDIFSKTGVTIGGGIQTDA 295

Query: 298 AINPGNSGGPLLNSKGSLIGINTAIFTQTGTSAGVGFAIPSSTVLRIVPQLIQYGKVVRG 357
           AINPGNSGGPLLNSKGSLIGIN AIFTQTGTSAGVGFAIPSSTV RIVPQLIQ+GKVVR 
Sbjct: 296 AINPGNSGGPLLNSKGSLIGINAAIFTQTGTSAGVGFAIPSSTVRRIVPQLIQFGKVVRA 355

Query: 358 GLNVDIAPDLVANQLNVRNGALILQVPANSPAAKAGLIPTTRGFAGNIVLGDIIVAVDNK 417
           GLNVDIAPDL+ANQLNVRNGALIL VP NS AAK GL PTTRGFAGNIVLGDII+AVDNK
Sbjct: 356 GLNVDIAPDLIANQLNVRNGALILTVPKNSLAAKLGLNPTTRGFAGNIVLGDIIIAVDNK 415

Query: 418 PVKSKAELLKALDDYNVGDKVILLIQRGSEKLEVPMLLEEQKS 460
           PVKSK ELLK LD+YNVG KV+LLIQRG EKLE+P++LEEQ S
Sbjct: 416 PVKSKGELLKVLDEYNVGTKVMLLIQRGDEKLELPVVLEEQSS 458


>Medtr6g007030.1 | trypsin-like serine protease | HC |
           chr6:1350091-1343643 | 20130731
          Length = 432

 Score =  291 bits (744), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 163/332 (49%), Positives = 216/332 (65%), Gaps = 15/332 (4%)

Query: 128 EDRVVQLFERNTYSVVNIFDVTLRPQLNVTGVVEIPEGNGSGVVWDDEGHIVTNYHVIGN 187
           E   V+LF+ NT SVV I ++ ++       V+E+P+G+GSG VWD +GHIVTNYHVI  
Sbjct: 111 ELATVRLFQENTPSVVYITNLAVKQDAFTLDVLEVPQGSGSGFVWDKDGHIVTNYHVIRG 170

Query: 188 ALSRNPSSGQVVARVNILASDGVQKNFEATVVGADRLKDLAVLKVEAPEDILRPIKVGQS 247
           A           + + +  +D  Q  ++A VVG D+ KD+AVL+V+AP+D LRPI VG S
Sbjct: 171 A-----------SDLRVTLAD--QSTYDAKVVGFDQDKDVAVLRVDAPKDKLRPIPVGVS 217

Query: 248 SSLKVGQQCLAIGNPFGFDHTLTVGVISGLNRDIFSXXXXX-XXXXXXXDAAINPGNSGG 306
           + L VGQ+  AIGNPFG DHTLT GVISGL R+I S             DAAINPGNSGG
Sbjct: 218 ADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGG 277

Query: 307 PLLNSKGSLIGINTAIFTQTGTSAGVGFAIPSSTVLRIVPQLIQYGKVVRGGLNVDIAPD 366
           PLL+S G+LIGINTAI++ +G S+GVGF+IP  TV  IV QL+++GKV R  L +  APD
Sbjct: 278 PLLDSSGNLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFGKVTRPILGIKFAPD 337

Query: 367 LVANQLNVRNGALILQVPANSPAAKAGLIPTTRGFAGNIVLGDIIVAVDNKPVKSKAELL 426
               QL V +G L+L  P   PA KAGL  T R   G ++LGDII +V+   V + ++L 
Sbjct: 338 QSVEQLGV-SGVLVLDAPVTGPAGKAGLQSTKRDSYGRLILGDIITSVNGNKVANGSDLY 396

Query: 427 KALDDYNVGDKVILLIQRGSEKLEVPMLLEEQ 458
           + LD   VGDKVI+ + RG  K ++P++LE +
Sbjct: 397 RILDQCKVGDKVIVEVLRGDHKEKIPVILEPK 428


>Medtr2g019140.1 | protease Do-like protein | HC |
           chr2:6181839-6175380 | 20130731
          Length = 325

 Score =  181 bits (459), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 108/235 (45%), Positives = 142/235 (60%), Gaps = 16/235 (6%)

Query: 130 RVVQLFERNTYSVVNIFDVTLR--PQLNVTGVV------EIPEGNGSGVVWDDEGHIVTN 181
            +V LF+  + SVV+I D+ L   P+ +   V+         EG GSG +WD  GHIVTN
Sbjct: 88  HLVHLFQETSPSVVSIKDIELTKVPKTSSKEVMLDEDEDAKVEGTGSGFIWDKFGHIVTN 147

Query: 182 YHVIGNALSRNPSSGQVVARVNILASDGVQKNF--EATVVGADRLKDLAVLKVEAPEDIL 239
           YHV+   L+ + S  Q   R  +   D    NF  E  ++G D   DLAVLKV+     L
Sbjct: 148 YHVVAK-LATDTSGLQ---RCKVFLVDAKGNNFSREGKIIGFDPSYDLAVLKVDVDGYEL 203

Query: 240 RPIKVGQSSSLKVGQQCLAIGNPFGFDHTLTVGVISGLNRDIFSXXXXXXXXXXXXDAAI 299
           +P+ +G+S +L VGQ C AIGNP+G+++TLT GV+SGL R+I S            DAAI
Sbjct: 204 KPVVIGESKNLHVGQSCFAIGNPYGYENTLTTGVVSGLGREIPSPNGGAIKGAIQTDAAI 263

Query: 300 NPGNSGGPLLNSKGSLIGINTAIFTQ--TGTSAGVGFAIPSSTVLRIVPQLIQYG 352
           N GNSGGPL++S G ++G+NTA FT+  TG S+GV FAIP   VLR VP LI YG
Sbjct: 264 NAGNSGGPLIDSHGHVVGVNTATFTRKGTGASSGVNFAIPIDAVLRSVPYLIVYG 318


>Medtr7g113170.1 | trypsin-like serine protease | HC |
           chr7:46585203-46590419 | 20130731
          Length = 433

 Score =  122 bits (305), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 154/303 (50%), Gaps = 32/303 (10%)

Query: 167 GSGVVWDDEGHIVTNYHVIGNALSRNPSSGQVVARVNILASDGVQKNFEATVVGADRLKD 226
           GSG + + +G I+T  HV+   +  + + G    ++ +   DG  + FE  VV AD   D
Sbjct: 147 GSGTIINKDGTILTCAHVV---VDFHGTKGSSKGKIEVTLQDG--RTFEGKVVNADMHSD 201

Query: 227 LAVLKVEAPEDILRPIKVGQSSSLKVGQQCLAIGNPFGFDHTLTVGVISGLNRDIFSXXX 286
           +AV+K+ + E  L   K+G S+ L+ G   +A+G P    +T+T G++S ++R       
Sbjct: 202 IAVVKINS-ETPLPEAKLGSSTMLRPGDWVIAMGCPHSLQNTVTAGIVSCVDRKSSDLGF 260

Query: 287 XXX-XXXXXXDAAINPGNSGGPLLNSKGSLIGINTAIFTQTGTSAGVGFAIPSSTVLRIV 345
                     D AIN GNSGGPL+N  G ++G+N     +   + G+GF++P  +V +I+
Sbjct: 261 SGSPREYLQTDCAINVGNSGGPLVNMDGEIVGVN---IMKVLAADGLGFSVPIDSVCKII 317

Query: 346 PQLIQYGKVVRGGLNVDIAP--DLVANQL--------NVRNGALILQVPANSPAAKAGLI 395
               + G+V+R  L + +    +++  QL        NV  G L+  V   SP  +AG  
Sbjct: 318 EHFKKSGRVIRPWLGLRMLDLNEMIIEQLKKKDASFPNVNKGILVPMVTPGSPGDRAGFR 377

Query: 396 PTTRGFAGNIVLGDIIVAVDNKPVKSKAELLKALDDYNVGDKVILLIQRGSEKLEVPMLL 455
           P           GD++V  D KPV+S  E+++ + D  VG  + ++++R ++K     ++
Sbjct: 378 P-----------GDVVVEFDGKPVESMKEVIEMMVD-KVGVPIKVVVKRANDKFATLTVI 425

Query: 456 EEQ 458
            E+
Sbjct: 426 PEE 428


>Medtr2g019140.2 | protease Do-like protein | HC |
           chr2:6181836-6175380 | 20130731
          Length = 247

 Score =  109 bits (273), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 66/156 (42%), Positives = 91/156 (58%), Gaps = 14/156 (8%)

Query: 130 RVVQLFERNTYSVVNIFDVTLR--PQLNVTGVV------EIPEGNGSGVVWDDEGHIVTN 181
            +V LF+  + SVV+I D+ L   P+ +   V+         EG GSG +WD  GHIVTN
Sbjct: 88  HLVHLFQETSPSVVSIKDIELTKVPKTSSKEVMLDEDEDAKVEGTGSGFIWDKFGHIVTN 147

Query: 182 YHVIGNALSRNPSSGQVVARVNILASDGVQKNF--EATVVGADRLKDLAVLKVEAPEDIL 239
           YHV+   L+ + S  Q   R  +   D    NF  E  ++G D   DLAVLKV+     L
Sbjct: 148 YHVVAK-LATDTSGLQ---RCKVFLVDAKGNNFSREGKIIGFDPSYDLAVLKVDVDGYEL 203

Query: 240 RPIKVGQSSSLKVGQQCLAIGNPFGFDHTLTVGVIS 275
           +P+ +G+S +L VGQ C AIGNP+G+++TLT GVIS
Sbjct: 204 KPVVIGESKNLHVGQSCFAIGNPYGYENTLTTGVIS 239


>Medtr7g113170.2 | trypsin-like serine protease | HC |
           chr7:46585203-46589490 | 20130731
          Length = 380

 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 113/216 (52%), Gaps = 12/216 (5%)

Query: 167 GSGVVWDDEGHIVTNYHVIGNALSRNPSSGQVVARVNILASDGVQKNFEATVVGADRLKD 226
           GSG + + +G I+T  HV+   +  + + G    ++ +   DG  + FE  VV AD   D
Sbjct: 147 GSGTIINKDGTILTCAHVV---VDFHGTKGSSKGKIEVTLQDG--RTFEGKVVNADMHSD 201

Query: 227 LAVLKVEAPEDILRPIKVGQSSSLKVGQQCLAIGNPFGFDHTLTVGVISGLNRDIFSXXX 286
           +AV+K+ + E  L   K+G S+ L+ G   +A+G P    +T+T G++S ++R       
Sbjct: 202 IAVVKINS-ETPLPEAKLGSSTMLRPGDWVIAMGCPHSLQNTVTAGIVSCVDRKSSDLGF 260

Query: 287 XXX-XXXXXXDAAINPGNSGGPLLNSKGSLIGINTAIFTQTGTSAGVGFAIPSSTVLRIV 345
                     D AIN GNSGGPL+N  G ++G+N     +   + G+GF++P  +V +I+
Sbjct: 261 SGSPREYLQTDCAINVGNSGGPLVNMDGEIVGVN---IMKVLAADGLGFSVPIDSVCKII 317

Query: 346 PQLIQYGKVVRGGLNVDIAP--DLVANQLNVRNGAL 379
               + G+V+R  L + +    +++  QL  ++ + 
Sbjct: 318 EHFKKSGRVIRPWLGLRMLDLNEMIIEQLKKKDASF 353


>Medtr1g088980.1 | DegP protease | HC | chr1:39969497-39960538 |
           20130731
          Length = 596

 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 95/197 (48%), Gaps = 19/197 (9%)

Query: 226 DLAVLKVEAPE--DILRPIKVGQSSSLKVGQQCLAIGNPFGFDH-TLTVGVISGLNRDIF 282
           DLA+L VE+ E    + P++ G    L+       +G PFG D  ++T GV+S +    +
Sbjct: 177 DLALLSVESEEFWRDVEPLRFGHLPHLQ--DSVTVVGYPFGGDTISVTKGVVSRVEVTSY 234

Query: 283 SXXXXXXXXXXXXDAAINPGNSGGPLLNSKGSLIGINTAIFTQTGTSAGVGFAIPSSTVL 342
           +            DAAINPGNSGGP  N +G  IG+   ++ ++  +  +G+ IPS+ V 
Sbjct: 235 AHGSSELLGIQI-DAAINPGNSGGPAFNDQGECIGVAFQVY-RSEDAENIGYVIPSTVVS 292

Query: 343 RIVPQLIQYGKVVRGGLNVDIAPDLVANQLNVRNGAL--ILQVPANSPAAKAGLIPTTRG 400
             +    + GK    G      P L      + N AL   L++ +N       + PT+  
Sbjct: 293 HFLTDYEKNGKYT--GF-----PCLGVLIQKLENPALRACLKLQSNEGVLVRRVEPTSD- 344

Query: 401 FAGNIVL-GDIIVAVDN 416
            A N++  GD+IV+ D+
Sbjct: 345 -ANNVLKEGDVIVSFDD 360


>Medtr4g106730.1 | serine endopeptidase degp2 protein, putative | HC
           | chr4:44048692-44043150 | 20130731
          Length = 590

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 76/170 (44%), Gaps = 10/170 (5%)

Query: 180 TNYHVIGNALSRNPSSGQVVARVNILASDGVQKNFEATVVGADRLKDLAVLKVEAPE--D 237
           T + + G  +  N  S +   +V  L   G    + ATV+      D+A+L V+  E   
Sbjct: 157 TGFVISGKRVLTNAHSVEHYTQVK-LKKRGSDTKYLATVLAIGTECDIAMLTVDDDEFWQ 215

Query: 238 ILRPIKVGQSSSLKVGQQCLAIGNPFGFDH-TLTVGVISGLNRDIFSXXXXXXXXX-XXX 295
            + P+  G+  +L+       +G P G D  ++T GV+S +  +I S             
Sbjct: 216 GMSPVDFGELPTLQ--DAVTVVGYPIGGDTISVTSGVVSRI--EILSYVHGSTELLGLQI 271

Query: 296 DAAINPGNSGGPLLNSKGSLIGINTAIFTQTGTSAGVGFAIPSSTVLRIV 345
           DAAIN GNSGGP  N KG+ +GI             +G+ IP+  ++  +
Sbjct: 272 DAAINSGNSGGPAFNGKGTCVGIAFQSLKHEDVE-NIGYVIPTPVIMHFI 320