Miyakogusa Predicted Gene

Lj2g3v1058030.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1058030.1 Non Characterized Hit- tr|I1LWJ9|I1LWJ9_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,75.66,0,SUV3_C,Mitochondrial degradasome RNA helicase subunit,
C-terminal domain; Helicase_C,Helicase, C-ter,CUFF.36073.1
         (833 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g011800.1 | ATP-dependent RNA helicase SUPV3L1 | HC | chr6...  1275   0.0  
Medtr5g006660.1 | ATP-dependent RNA helicase SUPV3L1 | HC | chr5...   419   e-117
Medtr5g006660.2 | ATP-dependent RNA helicase SUPV3L1 | HC | chr5...   402   e-111
Medtr3g013660.1 | hypothetical protein | LC | chr3:3709170-37142...   104   3e-22
Medtr3g013680.1 | ATP-dependent RNA helicase, putative | LC | ch...    91   4e-18

>Medtr6g011800.1 | ATP-dependent RNA helicase SUPV3L1 | HC |
           chr6:3521999-3519543 | 20130731
          Length = 818

 Score = 1275 bits (3299), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 631/832 (75%), Positives = 705/832 (84%), Gaps = 30/832 (3%)

Query: 1   MARGPASSLFHLCTRK-RTLSRFKALLFNHSHPSPS--QFHP-VRPFSTHLQNRRFLPSF 56
           MARG  SS+F L TRK RT S  K LLFNH+H S S  QFH   R FSTHL   RF PS 
Sbjct: 1   MARGSISSIFLLYTRKKRTFSTLKPLLFNHTHSSSSNSQFHGHFRHFSTHLIKSRFCPSL 60

Query: 57  HQSLNLSGGRTNPTRPFSTDGEEGDGTVTPDSDFDADFGKNADFELGNEVNDGVCALSDN 116
            Q+LN  GGR+ P RPFSTDGEEG      D++ +   G+N +FELGNEV+D V  LS+N
Sbjct: 61  CQTLNFYGGRSIPIRPFSTDGEEGCKEADLDTEIEKGAGENDEFELGNEVSDDVYGLSEN 120

Query: 117 VDAANDGNDECSNEIVESVEFCNGSDSEEG------GELVRESQ--EFVHVASRDPVELY 168
               + GND+C +EI++SVE C+ S+S          EL  +S+  +F HVASRDP+ELY
Sbjct: 121 GVDLDYGNDDCDSEIIDSVE-CSNSNSSSSGSSSNVDELENKSEVVDFTHVASRDPIELY 179

Query: 169 RELVSVEKGVKLNRYDVESLQEVFRCLAESGWASNQALAIYIGLSFFPTAVHKFRNFYLK 228
            EL +V+KG KL R +VE  Q+VF   A+SGWASNQALA+YIGLSF+PTA HKFRNF++K
Sbjct: 180 GELKNVKKGAKLTRDEVEVFQDVFHYFAKSGWASNQALAMYIGLSFYPTAAHKFRNFFMK 239

Query: 229 KCPADVTKYLLALGPSDAAVKFLFPIFVEFCLENFPDEIKRFRGMVESADLTKPHTWFPF 288
           +CP DVTKYL++LGP D AVKFLFPIFVEFCLENF DEI RFR MV+SADLT PHTWFPF
Sbjct: 240 RCPEDVTKYLISLGPCDEAVKFLFPIFVEFCLENFTDEITRFREMVKSADLTMPHTWFPF 299

Query: 289 ARAMKRKIIYHCGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNAKGVYCSLL 348
           ARAMKRKIIYHCGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNAKGVYCSLL
Sbjct: 300 ARAMKRKIIYHCGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNAKGVYCSLL 359

Query: 349 TGQERKLVPFSNHVACTVEMVSTQELYDVAIIDEIQMMADPYRGYAWTRALLGLKADEIH 408
           TGQE+K +PFSNHVACTVEM STQELY+VAI+DEIQMMADPYRGYAWTRALLGL ADEIH
Sbjct: 360 TGQEKKYLPFSNHVACTVEMASTQELYEVAIVDEIQMMADPYRGYAWTRALLGLMADEIH 419

Query: 409 VCGDPSVLDIVRKICQDTGDQLYEQHYERFKPLVVEAKTLLGNLQNIRSGDCVVAFSRRE 468
           +CGDPSVLDIVRKICQ+TGD LYEQHYERFKPLVVEAKTLLGNL+NI+SGDCVVAFSRRE
Sbjct: 420 LCGDPSVLDIVRKICQETGDDLYEQHYERFKPLVVEAKTLLGNLENIKSGDCVVAFSRRE 479

Query: 469 IFEVKLAIEKQTKHRCCVIYGALPPETRRQQANLFNDQNNEYDVLVASDAVGMGLNLNIR 528
           IFEVKLAIEK T H+CCVIYGALPPETRRQQANLFNDQ+NEYDVLVASDAVGMGLNLNIR
Sbjct: 480 IFEVKLAIEKHTNHKCCVIYGALPPETRRQQANLFNDQSNEYDVLVASDAVGMGLNLNIR 539

Query: 529 RVIFNSLSKYNGDKMVHVPASQVKQIAGRAGRRGCLYPDGLATTLHIDDMDYLIECLKQP 588
           RVIFN+LSKYNGDK++ VPASQVKQIAGRAGRRGC+YPDGLATTLH++D+DYLIECLKQP
Sbjct: 540 RVIFNNLSKYNGDKILPVPASQVKQIAGRAGRRGCVYPDGLATTLHLEDLDYLIECLKQP 599

Query: 589 FDNVKKVGLFPFYEQLELFAGQLPNMTFSQLLEKFGENCRLDGSYYLCRHDHIKKIANML 648
           FD+V+KVGLFP+YEQ+ELFAGQL NMTFSQLLEKFGENCRLDGSY+LCRHDHIKKI+NML
Sbjct: 600 FDHVEKVGLFPYYEQVELFAGQLSNMTFSQLLEKFGENCRLDGSYFLCRHDHIKKISNML 659

Query: 649 EKIQGLSLEDRFNFCFAPVNVRDPKAMYHLLRFATKFGQKLPVSIAMGMPTCSARNDSEL 708
           E+I GLSLE+RFNFCFAP+NVRDPKAMYHLLRFAT FGQK+PV+IAMGMP CSARNDSEL
Sbjct: 660 ERIPGLSLEERFNFCFAPINVRDPKAMYHLLRFATAFGQKVPVNIAMGMPKCSARNDSEL 719

Query: 709 LDLETRHQVLSMYLWLSNHFDEETFPYVKKAETMASDIADLLAQSLIKANWKPESRNKGK 768
           LDLE+RHQVLS Y+WLSNHFD+E FPY +KA+ MA+DIA LLAQSL KA+WKPESR +GK
Sbjct: 720 LDLESRHQVLSSYMWLSNHFDKEKFPYAEKAQAMAADIAILLAQSLRKADWKPESRGRGK 779

Query: 769 PNTGRSDVQTESRSKGVLKTGKSEEQTEPRSGAILKTEKKSNGYSIPQSLVK 820
           P    S+                E QTE RS   L+TEKK+ GYS PQSLVK
Sbjct: 780 PKAADSE----------------EPQTESRSDT-LETEKKNRGYSRPQSLVK 814


>Medtr5g006660.1 | ATP-dependent RNA helicase SUPV3L1 | HC |
           chr5:1030691-1021841 | 20130731
          Length = 570

 Score =  419 bits (1077), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 214/498 (42%), Positives = 319/498 (64%), Gaps = 15/498 (3%)

Query: 275 ESADLTKPHTWFPFARAMKRKIIYHCGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEV 334
           E  D+T PHTW+P AR  +R++  H GPTNSGKTY AL++   +  GIYC PLRLLA EV
Sbjct: 60  EITDMTCPHTWYPLARRKRRRVFLHVGPTNSGKTYQALKQLQSSASGIYCGPLRLLAWEV 119

Query: 335 FDKVNAKGVYCSLLTGQERKLVPFSNHVACTVEMVSTQELYDVAIIDEIQMMADPYRGYA 394
             ++N   V C L+TGQER  V  ++H A TVEM      Y  A+IDEIQM+    RGY+
Sbjct: 120 AKRLNKANVPCDLITGQERDEVEGAHHKAVTVEMADVSTDYKCAVIDEIQMLGCNTRGYS 179

Query: 395 WTRALLGLKADEIHVCGDPSVLDIVRKICQDTGDQLYEQHYERFKPLVVEAKTLLGNLQN 454
           +TRALLG+ ADE+H+CGDP+ + ++++I   TGD+L  Q+YER  PLV   K  L +L +
Sbjct: 180 FTRALLGIAADELHLCGDPAAVPLIQEILDITGDELEVQYYERLSPLV-PMKVPLRSLSD 238

Query: 455 IRSGDCVVAFSRREIFEVKLAIEKQTKHRCCVIYGALPPETRRQQANLFNDQNNEYDVLV 514
           +R+GDC+V FSRR+I+++K  IE++ KH C V+YG+LPPETR +QA++FND ++E+DVLV
Sbjct: 239 VRNGDCIVTFSRRDIYKLKKRIEREGKHLCSVVYGSLPPETRTRQASMFNDASSEFDVLV 298

Query: 515 ASDAVGMGLNLNIRRVIFNSLSKYNGDKMVHVPASQVKQIAGRAGRRGCLYPDGLATTLH 574
           ASDA+GMGLNLNI R+IF+++ K++G +M  +   ++KQIAGRAGR G  +P G  T + 
Sbjct: 299 ASDAIGMGLNLNISRIIFSTMQKFDGFQMRDLTVPEIKQIAGRAGRYGSNFPLGEVTCMS 358

Query: 575 IDDMDYLIECLKQPFDNVKKVGLFPFYEQLELFAGQLPNMTFSQLLEKFGENCRLDGSYY 634
            DD+  L   L  P   +++ GL P YE L +++   P   F Q+LE F +N +L   Y+
Sbjct: 359 GDDLPLLHSALDSPSPILERAGLLPSYELLYMYSRLHPQAGFYQVLEHFVDNAKLSEKYF 418

Query: 635 LCRHDHIKKIANMLEKIQGLSLEDRFNFCFAPVNVRDPKAMYHLLRFATKFGQKLPVSI- 693
           +   D + K+A ++++   L L D++ FC +P ++ D  +   L +F   + +K  V + 
Sbjct: 419 IVNCDQVLKVAAVVDEFP-LELRDKYLFCISPADMDDEISSQGLTQFVENYAKKGLVRLR 477

Query: 694 ------AMGMPTCSARNDSELLDLETRHQVLSMYLWLSNHFDEETFPYVKKAETMASDIA 747
                  + +PT        L DLE+ H+VL +Y+WLS    E++FP  + A++  +  +
Sbjct: 478 EIFTPGTLKVPT----TPQALKDLESIHKVLDLYVWLSFRL-EDSFPDHELAKSQKALCS 532

Query: 748 DLLAQSLIKANW-KPESR 764
            L+ + L +  W KP +R
Sbjct: 533 MLIEEFLDRYGWQKPMAR 550


>Medtr5g006660.2 | ATP-dependent RNA helicase SUPV3L1 | HC |
           chr5:1030691-1022392 | 20130731
          Length = 524

 Score =  402 bits (1032), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 201/455 (44%), Positives = 294/455 (64%), Gaps = 13/455 (2%)

Query: 275 ESADLTKPHTWFPFARAMKRKIIYHCGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEV 334
           E  D+T PHTW+P AR  +R++  H GPTNSGKTY AL++   +  GIYC PLRLLA EV
Sbjct: 60  EITDMTCPHTWYPLARRKRRRVFLHVGPTNSGKTYQALKQLQSSASGIYCGPLRLLAWEV 119

Query: 335 FDKVNAKGVYCSLLTGQERKLVPFSNHVACTVEMVSTQELYDVAIIDEIQMMADPYRGYA 394
             ++N   V C L+TGQER  V  ++H A TVEM      Y  A+IDEIQM+    RGY+
Sbjct: 120 AKRLNKANVPCDLITGQERDEVEGAHHKAVTVEMADVSTDYKCAVIDEIQMLGCNTRGYS 179

Query: 395 WTRALLGLKADEIHVCGDPSVLDIVRKICQDTGDQLYEQHYERFKPLVVEAKTLLGNLQN 454
           +TRALLG+ ADE+H+CGDP+ + ++++I   TGD+L  Q+YER  PLV   K  L +L +
Sbjct: 180 FTRALLGIAADELHLCGDPAAVPLIQEILDITGDELEVQYYERLSPLV-PMKVPLRSLSD 238

Query: 455 IRSGDCVVAFSRREIFEVKLAIEKQTKHRCCVIYGALPPETRRQQANLFNDQNNEYDVLV 514
           +R+GDC+V FSRR+I+++K  IE++ KH C V+YG+LPPETR +QA++FND ++E+DVLV
Sbjct: 239 VRNGDCIVTFSRRDIYKLKKRIEREGKHLCSVVYGSLPPETRTRQASMFNDASSEFDVLV 298

Query: 515 ASDAVGMGLNLNIRRVIFNSLSKYNGDKMVHVPASQVKQIAGRAGRRGCLYPDGLATTLH 574
           ASDA+GMGLNLNI R+IF+++ K++G +M  +   ++KQIAGRAGR G  +P G  T + 
Sbjct: 299 ASDAIGMGLNLNISRIIFSTMQKFDGFQMRDLTVPEIKQIAGRAGRYGSNFPLGEVTCMS 358

Query: 575 IDDMDYLIECLKQPFDNVKKVGLFPFYEQLELFAGQLPNMTFSQLLEKFGENCRLDGSYY 634
            DD+  L   L  P   +++ GL P YE L +++   P   F Q+LE F +N +L   Y+
Sbjct: 359 GDDLPLLHSALDSPSPILERAGLLPSYELLYMYSRLHPQAGFYQVLEHFVDNAKLSEKYF 418

Query: 635 LCRHDHIKKIANMLEKIQGLSLEDRFNFCFAPVNVRDPKAMYHLLRFATKFGQKLPVSI- 693
           +   D + K+A ++++   L L D++ FC +P ++ D  +   L +F   + +K  V + 
Sbjct: 419 IVNCDQVLKVAAVVDEFP-LELRDKYLFCISPADMDDEISSQGLTQFVENYAKKGLVRLR 477

Query: 694 ------AMGMPTCSARNDSELLDLETRHQVLSMYL 722
                  + +PT        L DLE+ H+V S+ L
Sbjct: 478 EIFTPGTLKVPT----TPQALKDLESIHKVFSVAL 508


>Medtr3g013660.1 | hypothetical protein | LC | chr3:3709170-3714228
           | 20130731
          Length = 440

 Score =  104 bits (260), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/191 (39%), Positives = 85/191 (44%), Gaps = 86/191 (45%)

Query: 318 AKKGIYCSPLRLLAMEVFDKVNAKGVYCSLLTGQERKLVPFSNHVACTVEMVSTQELYDV 377
           AKK   CSPLRLL M+VFD+VN                                 E YD+
Sbjct: 200 AKKRNCCSPLRLLTMKVFDEVN---------------------------------ESYDM 226

Query: 378 AIIDEIQMMADPYRGYAWTRALLGLKADEIHVCGDPSVLDIVRKICQDTGDQLYEQH-YE 436
            I+DEIQMMAD Y GYA TR L+GLK DE+H+                T D+L EQ  YE
Sbjct: 227 TIVDEIQMMADSYSGYACTRVLIGLKDDELHLY---------------TEDELCEQKLYE 271

Query: 437 RFKPLVVEAKTLLGNLQNIRSGDCVVAFSRREIFEVKLAIEKQTKHRCCVIYGALPPETR 496
           RFK LVVEAKTLLGN+                                      LPPE R
Sbjct: 272 RFKQLVVEAKTLLGNV-------------------------------------YLPPEIR 294

Query: 497 RQQANLFNDQN 507
            QQ NLFNDQ+
Sbjct: 295 SQQVNLFNDQS 305



 Score = 90.1 bits (222), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 54/135 (40%), Positives = 71/135 (52%), Gaps = 16/135 (11%)

Query: 639 DHIKKIANMLEKIQGLSLEDRFNFCFAPVNVRDPKAMYHLLRFATKFGQKLPVSIAMGMP 698
           D I KIAN LEKI+GLSLE+RFN      +VR                 +LP +++MGM 
Sbjct: 321 DRIYKIANPLEKIEGLSLENRFNLYLQQCSVRR---------------SQLPGNMSMGML 365

Query: 699 TCSARNDSELLDLETRHQVLSMYLWLSNHFDEETFPYVKKAETMASDIADLLAQSLIKAN 758
            CS +NDS LLDL    +              +TF Y+++          LL QSL+KA 
Sbjct: 366 KCSVQNDSGLLDLRVGIEYYRHIFGYQAILMRKTF-YMQRKMRQWLQTLHLLGQSLVKAG 424

Query: 759 WKPESRNKGKPNTGR 773
           WKPE+RN+GKP  G+
Sbjct: 425 WKPEARNRGKPKAGK 439


>Medtr3g013680.1 | ATP-dependent RNA helicase, putative | LC |
           chr3:3716992-3717489 | 20130731
          Length = 127

 Score = 91.3 bits (225), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 39/50 (78%), Positives = 45/50 (90%)

Query: 563 CLYPDGLATTLHIDDMDYLIECLKQPFDNVKKVGLFPFYEQLELFAGQLP 612
           CLYPD LATTL +DDMDYLIECLKQPFD+V +VG+FPFYEQ+ELF G +P
Sbjct: 21  CLYPDELATTLQLDDMDYLIECLKQPFDHVTRVGIFPFYEQVELFPGNIP 70



 Score = 86.7 bits (213), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 42/63 (66%), Positives = 47/63 (74%)

Query: 689 LPVSIAMGMPTCSARNDSELLDLETRHQVLSMYLWLSNHFDEETFPYVKKAETMASDIAD 748
            P +I MGM  CSA+NDS +LDLE+RH VL  YLWLSNHFDE+ FPY KKAE M SD A 
Sbjct: 65  FPGNIPMGMLKCSAQNDSGILDLESRHPVLFSYLWLSNHFDEDNFPYAKKAEAMVSDNAC 124

Query: 749 LLA 751
           LL 
Sbjct: 125 LLG 127