Miyakogusa Predicted Gene

Lj2g3v1034750.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1034750.3 Non Characterized Hit- tr|I1N635|I1N635_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,86.69,0,seg,NULL;
Q84JW0_ARATH_Q84JW0;,3-dehydroquinate synthase, prokaryotic-type;
DHQS,3-dehydroquinate sy,CUFF.36089.3
         (337 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g039990.1 | 3-dehydroquinate synthase | HC | chr1:14627339...   574   e-164
Medtr1g039990.2 | 3-dehydroquinate synthase | HC | chr1:14627339...   574   e-164

>Medtr1g039990.1 | 3-dehydroquinate synthase | HC |
           chr1:14627339-14632188 | 20130731
          Length = 398

 Score =  574 bits (1479), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 283/338 (83%), Positives = 302/338 (89%), Gaps = 1/338 (0%)

Query: 1   MTAAVERGWNTFLFSSH-HQKAHDWSSIAVICPLFVGEGEILDGQDKRVATVFDVSTXXX 59
           MTAAVERGWNTF+F S+    A+DWSSIAVICPLF  E EILD Q+K+VAT+FDVST   
Sbjct: 61  MTAAVERGWNTFIFPSNLPHLANDWSSIAVICPLFASEKEILDAQNKKVATIFDVSTPEE 120

Query: 60  XXXXXXXXXQAENIVVNLLDWQVIPAENIIAAFQSSGKKVIAISSNASEAQIFLEALEHG 119
                    QAENIVVNLLDWQVIPAENIIAAFQ+S K V AIS NASEAQ FLEALEHG
Sbjct: 121 LERLRPEDEQAENIVVNLLDWQVIPAENIIAAFQNSQKTVFAISDNASEAQTFLEALEHG 180

Query: 120 LDGIVLKVEDVESILELKEYFDRRTEESNLLSLSKATVTHVQVAGMGDRACVDLCSLMKP 179
           LDGIVLKVEDVE +LELKEYFDRRTEESN+L+L+KATVT +QVAGMGDR CVDLCSLM+P
Sbjct: 181 LDGIVLKVEDVEPMLELKEYFDRRTEESNVLNLTKATVTQIQVAGMGDRVCVDLCSLMRP 240

Query: 180 GEGLLVGSFARGLFLVHSECMESNYIASRPFRVNAGPVHAYVAVPGGRTCYLSELKSGKE 239
           GEGLLVGSFARGLFLVHSEC+ESNYIASRPFRVNAGPVHAY+AVPGGRT YLSELKSGKE
Sbjct: 241 GEGLLVGSFARGLFLVHSECLESNYIASRPFRVNAGPVHAYIAVPGGRTSYLSELKSGKE 300

Query: 240 VIVVDQKGRQRIAIVGRVKIESRPLVLVEAKIDSDDQTISILLQNAETVPLVCPQQGNAL 299
           VIVVDQ+GRQRIAIVGRVKIESRPL+LVEAK DSD+QTISILLQNAETV LVCP QGN L
Sbjct: 301 VIVVDQQGRQRIAIVGRVKIESRPLILVEAKTDSDNQTISILLQNAETVALVCPVQGNKL 360

Query: 300 SKTAIPVTSLKIGDEVLLRVQGGARHTGIEIQEFIVEK 337
            KTA PVTSLK+GDEVLLRVQGGARHTGIEIQEFIVEK
Sbjct: 361 LKTAFPVTSLKVGDEVLLRVQGGARHTGIEIQEFIVEK 398


>Medtr1g039990.2 | 3-dehydroquinate synthase | HC |
           chr1:14627339-14632173 | 20130731
          Length = 398

 Score =  574 bits (1479), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 283/338 (83%), Positives = 302/338 (89%), Gaps = 1/338 (0%)

Query: 1   MTAAVERGWNTFLFSSH-HQKAHDWSSIAVICPLFVGEGEILDGQDKRVATVFDVSTXXX 59
           MTAAVERGWNTF+F S+    A+DWSSIAVICPLF  E EILD Q+K+VAT+FDVST   
Sbjct: 61  MTAAVERGWNTFIFPSNLPHLANDWSSIAVICPLFASEKEILDAQNKKVATIFDVSTPEE 120

Query: 60  XXXXXXXXXQAENIVVNLLDWQVIPAENIIAAFQSSGKKVIAISSNASEAQIFLEALEHG 119
                    QAENIVVNLLDWQVIPAENIIAAFQ+S K V AIS NASEAQ FLEALEHG
Sbjct: 121 LERLRPEDEQAENIVVNLLDWQVIPAENIIAAFQNSQKTVFAISDNASEAQTFLEALEHG 180

Query: 120 LDGIVLKVEDVESILELKEYFDRRTEESNLLSLSKATVTHVQVAGMGDRACVDLCSLMKP 179
           LDGIVLKVEDVE +LELKEYFDRRTEESN+L+L+KATVT +QVAGMGDR CVDLCSLM+P
Sbjct: 181 LDGIVLKVEDVEPMLELKEYFDRRTEESNVLNLTKATVTQIQVAGMGDRVCVDLCSLMRP 240

Query: 180 GEGLLVGSFARGLFLVHSECMESNYIASRPFRVNAGPVHAYVAVPGGRTCYLSELKSGKE 239
           GEGLLVGSFARGLFLVHSEC+ESNYIASRPFRVNAGPVHAY+AVPGGRT YLSELKSGKE
Sbjct: 241 GEGLLVGSFARGLFLVHSECLESNYIASRPFRVNAGPVHAYIAVPGGRTSYLSELKSGKE 300

Query: 240 VIVVDQKGRQRIAIVGRVKIESRPLVLVEAKIDSDDQTISILLQNAETVPLVCPQQGNAL 299
           VIVVDQ+GRQRIAIVGRVKIESRPL+LVEAK DSD+QTISILLQNAETV LVCP QGN L
Sbjct: 301 VIVVDQQGRQRIAIVGRVKIESRPLILVEAKTDSDNQTISILLQNAETVALVCPVQGNKL 360

Query: 300 SKTAIPVTSLKIGDEVLLRVQGGARHTGIEIQEFIVEK 337
            KTA PVTSLK+GDEVLLRVQGGARHTGIEIQEFIVEK
Sbjct: 361 LKTAFPVTSLKVGDEVLLRVQGGARHTGIEIQEFIVEK 398