Miyakogusa Predicted Gene
- Lj2g3v1034670.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1034670.2 tr|H6C3G4|H6C3G4_EXODN F-box and WD-40
domain-containing protein CDC4 OS=Exophiala dermatitidis
(str,23.82,0.0000000000001,GPROTEINBRPT,G-protein beta WD-40 repeat;
seg,NULL; WD_REPEATS_1,WD40 repeat, conserved site; WD40
r,CUFF.36063.2
(523 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr6g011500.1 | WD domain, G-beta repeat protein | HC | chr6:3... 444 e-124
Medtr6g011510.1 | hypothetical protein | LC | chr6:3290474-32899... 115 1e-25
Medtr8g044020.1 | hypothetical protein | LC | chr8:16850256-1685... 92 1e-18
Medtr8g104010.1 | stomatal cytokinesis defective protein, putati... 59 1e-08
Medtr8g104010.3 | stomatal cytokinesis defective protein, putati... 59 1e-08
Medtr8g104010.2 | stomatal cytokinesis defective protein, putati... 58 2e-08
Medtr3g106080.1 | TBP-associated factor 5 | HC | chr3:48932864-4... 58 3e-08
Medtr4g105700.1 | transducin/WD40 repeat protein | HC | chr4:438... 53 8e-07
Medtr4g123597.1 | transducin family protein/WD-40 repeat protein... 51 2e-06
Medtr4g069090.1 | phospholipase A-2-activating protein | HC | ch... 51 3e-06
Medtr2g436510.1 | PP1/PP2A phosphatase pleiotropic regulator PRL... 51 3e-06
Medtr1g090827.1 | coatomer subunit alpha-like protein | HC | chr... 50 4e-06
>Medtr6g011500.1 | WD domain, G-beta repeat protein | HC |
chr6:3285166-3281035 | 20130731
Length = 376
Score = 444 bits (1142), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/365 (65%), Positives = 269/365 (73%), Gaps = 18/365 (4%)
Query: 129 QGSVVEMINLDAYQKRSRDAIQTLSDHKARITCMRLFSHNEMSSCRGETQGEQNVLVTSS 188
QGS MI D +Q A+ +S H ARITCMRLFS G QNVLVTSS
Sbjct: 15 QGSDAGMIIFDDHQDTV--AVHKMSGHNARITCMRLFS-----------LGGQNVLVTSS 61
Query: 189 CDHSIRLWRKGSCLRCLRGHNGPVLSLSNKLLGEGSSKVLASGGEDSTVRLWSLGSSGKR 248
CD +I+LW KGS LR L+GHNGPVLSLSNKLLGE SKVLASGGED TVRLWSL ++GKR
Sbjct: 62 CDRTIQLWSKGSNLRSLKGHNGPVLSLSNKLLGEEGSKVLASGGEDGTVRLWSLSANGKR 121
Query: 249 GQHALKATFYGHEKGVNFLSVAGHKTSLLVSMSRDSKVKVWDTXXXXXXXXXPCVGMTSF 308
+ ALKAT YGHEK VNFLSV+GHKTSLLV++S DSKV+VWDT CVGMT+
Sbjct: 122 VKSALKATLYGHEKPVNFLSVSGHKTSLLVTISTDSKVRVWDTTASSSGRSS-CVGMTNV 180
Query: 309 RGAPVNMKCHESLLYVAAGSSVTAVDLRTMQKVITVAVDQSKLYSFDAFPSKSLICTGGY 368
RGA VNM+CHESL+YVAAGSSVTAVDLRTMQKVIT AV QSKLYSF PSKSLI TGG
Sbjct: 181 RGATVNMQCHESLVYVAAGSSVTAVDLRTMQKVITAAVHQSKLYSFGVVPSKSLIGTGGD 240
Query: 369 GRAMLWDIRRNQESAKPDPITELDGHDGPVTMLHMDSYKIVTGSAE--MVRVWGVDTGVQ 426
GRAMLWDIR+NQE KP PI ELDGH GPVT LHMDSYKIVTG + V VW V+TGV
Sbjct: 241 GRAMLWDIRKNQEPLKPVPIAELDGHSGPVTRLHMDSYKIVTGGPDDAYVNVWEVETGVL 300
Query: 427 TMSLLSCLTQDYMGRSNFDAMAIDGCRAITAC-YCEDRGLLRFWDFNDATKPFTKIEDCP 485
T S L C ++ +G S D M +DGCR +TA Y +D G+ F DF++AT P TK+E+ P
Sbjct: 301 TNSFL-CFDEEDIGGSFCDDMVVDGCRIVTASNYNDDWGVFSFRDFDNATIPATKLENEP 359
Query: 486 SSRFW 490
SS+FW
Sbjct: 360 SSKFW 364
>Medtr6g011510.1 | hypothetical protein | LC | chr6:3290474-3289951
| 20130731
Length = 145
Score = 115 bits (287), Expect = 1e-25, Method: Composition-based stats.
Identities = 56/116 (48%), Positives = 70/116 (60%), Gaps = 8/116 (6%)
Query: 17 TTITDLNDDTFAHCASFLNPRDVCSLAMTSTALNRLAYSDSIWQRFFTERWQHEIPRASP 76
T ITDL+ D+ AHC L DVC+LA TSTAL LAYSD +W F RW E+P A+
Sbjct: 19 TKITDLDSDSIAHCVVNLTLHDVCNLAKTSTALKHLAYSDPVWHSLFKNRWNRELPDAAA 78
Query: 77 SHWSGNGARELYLARHTELQQFKFFDPFILDIHLQ---PKPFTQLLLHENYAYSVQ 129
A+ELY++RHT+L QFKF DPF+ +H KPF L+LH N + Q
Sbjct: 79 V-----PAKELYISRHTDLHQFKFRDPFVRTVHFDGRASKPFNHLILHHNNVFFSQ 129
>Medtr8g044020.1 | hypothetical protein | LC |
chr8:16850256-16850627 | 20130731
Length = 104
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 50/64 (78%)
Query: 305 MTSFRGAPVNMKCHESLLYVAAGSSVTAVDLRTMQKVITVAVDQSKLYSFDAFPSKSLIC 364
MT+ G PVNMKCHESL YVAAGSSV AVDLRTMQ V+T AV + ++ SF A SK L+C
Sbjct: 1 MTTVSGTPVNMKCHESLCYVAAGSSVIAVDLRTMQNVVTAAVHRPEIRSFAAVTSKYLLC 60
Query: 365 TGGY 368
TGGY
Sbjct: 61 TGGY 64
>Medtr8g104010.1 | stomatal cytokinesis defective protein, putative |
HC | chr8:43797022-43779326 | 20130731
Length = 1209
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 120/293 (40%), Gaps = 54/293 (18%)
Query: 202 LRCLRGHNGPVLSLSN-------KLLGE-GSSKVLASGGEDSTVRLWSLGSSGKRGQHAL 253
+R LRGHNG + +L L+G+ + SG D +V++W G L
Sbjct: 850 VRMLRGHNGAITALHCVTKREVWDLVGDREDAGFFISGSTDCSVKIWDPSLRGSE----L 905
Query: 254 KATFYGHEKGVNFLSVAGHKTSLLVSMSRDSKVKVWDTXXXXXXXXXPCVGMTSFRGAPV 313
+AT GH + V +S K +VS S D V VWD + +G
Sbjct: 906 RATLKGHTRTVRAISSDRGK---VVSGSDDQSVLVWDKQTTQL--------LEELKGHDG 954
Query: 314 NMKC-----HESLLYVAAGSSVTAVDLRTMQKVITVAVDQSKLYSFDAFPSKSLICTGGY 368
+ C E +L + +V D+RT + V TV S + + + ++ G
Sbjct: 955 PVSCVRTLSGERVLTASHDGTVKMWDVRTDRCVATVGRCSSAVLCMEYDDNVGILAAAGR 1014
Query: 369 G-RAMLWDIRRNQESAKPDPITELDGHDGPVTMLHMDSYKIVTGSAE-MVRVWGVDTGVQ 426
A +WDIR +++ K L GH + L M ++TGS + R+W V G
Sbjct: 1015 DVVANMWDIRASRQMHK------LSGHTQWIRSLRMVGDTVITGSDDWTARIWSVSRGT- 1067
Query: 427 TMSLLSC-----LTQDYMGRSNFDAMAIDGCRAITACYCEDRGLLRFWDFNDA 474
++L+C L +Y S+ D I G GLLRFW+ +D
Sbjct: 1068 CDAVLACHAGPILCVEY---SSLDRGIITG---------STDGLLRFWENDDG 1108
>Medtr8g104010.3 | stomatal cytokinesis defective protein, putative
| HC | chr8:43792477-43779326 | 20130731
Length = 846
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 120/293 (40%), Gaps = 54/293 (18%)
Query: 202 LRCLRGHNGPVLSLSN-------KLLGE-GSSKVLASGGEDSTVRLWSLGSSGKRGQHAL 253
+R LRGHNG + +L L+G+ + SG D +V++W G L
Sbjct: 487 VRMLRGHNGAITALHCVTKREVWDLVGDREDAGFFISGSTDCSVKIWDPSLRGSE----L 542
Query: 254 KATFYGHEKGVNFLSVAGHKTSLLVSMSRDSKVKVWDTXXXXXXXXXPCVGMTSFRGAPV 313
+AT GH + V +S K +VS S D V VWD + +G
Sbjct: 543 RATLKGHTRTVRAISSDRGK---VVSGSDDQSVLVWDKQTTQL--------LEELKGHDG 591
Query: 314 NMKC-----HESLLYVAAGSSVTAVDLRTMQKVITVAVDQSKLYSFDAFPSKSLICTGGY 368
+ C E +L + +V D+RT + V TV S + + + ++ G
Sbjct: 592 PVSCVRTLSGERVLTASHDGTVKMWDVRTDRCVATVGRCSSAVLCMEYDDNVGILAAAGR 651
Query: 369 G-RAMLWDIRRNQESAKPDPITELDGHDGPVTMLHMDSYKIVTGSAE-MVRVWGVDTGVQ 426
A +WDIR +++ K L GH + L M ++TGS + R+W V G
Sbjct: 652 DVVANMWDIRASRQMHK------LSGHTQWIRSLRMVGDTVITGSDDWTARIWSVSRGT- 704
Query: 427 TMSLLSC-----LTQDYMGRSNFDAMAIDGCRAITACYCEDRGLLRFWDFNDA 474
++L+C L +Y S+ D I G GLLRFW+ +D
Sbjct: 705 CDAVLACHAGPILCVEY---SSLDRGIITGS---------TDGLLRFWENDDG 745
>Medtr8g104010.2 | stomatal cytokinesis defective protein, putative
| HC | chr8:43793799-43779326 | 20130731
Length = 929
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 120/293 (40%), Gaps = 54/293 (18%)
Query: 202 LRCLRGHNGPVLSLSN-------KLLGE-GSSKVLASGGEDSTVRLWSLGSSGKRGQHAL 253
+R LRGHNG + +L L+G+ + SG D +V++W G L
Sbjct: 570 VRMLRGHNGAITALHCVTKREVWDLVGDREDAGFFISGSTDCSVKIWDPSLRGSE----L 625
Query: 254 KATFYGHEKGVNFLSVAGHKTSLLVSMSRDSKVKVWDTXXXXXXXXXPCVGMTSFRGAPV 313
+AT GH + V +S K +VS S D V VWD + +G
Sbjct: 626 RATLKGHTRTVRAISSDRGK---VVSGSDDQSVLVWDKQTTQL--------LEELKGHDG 674
Query: 314 NMKC-----HESLLYVAAGSSVTAVDLRTMQKVITVAVDQSKLYSFDAFPSKSLICTGGY 368
+ C E +L + +V D+RT + V TV S + + + ++ G
Sbjct: 675 PVSCVRTLSGERVLTASHDGTVKMWDVRTDRCVATVGRCSSAVLCMEYDDNVGILAAAGR 734
Query: 369 G-RAMLWDIRRNQESAKPDPITELDGHDGPVTMLHMDSYKIVTGSAE-MVRVWGVDTGVQ 426
A +WDIR +++ K L GH + L M ++TGS + R+W V G
Sbjct: 735 DVVANMWDIRASRQMHK------LSGHTQWIRSLRMVGDTVITGSDDWTARIWSVSRGT- 787
Query: 427 TMSLLSC-----LTQDYMGRSNFDAMAIDGCRAITACYCEDRGLLRFWDFNDA 474
++L+C L +Y S+ D I G GLLRFW+ +D
Sbjct: 788 CDAVLACHAGPILCVEY---SSLDRGIITGST---------DGLLRFWENDDG 828
>Medtr3g106080.1 | TBP-associated factor 5 | HC |
chr3:48932864-48942802 | 20130731
Length = 669
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 58/111 (52%), Gaps = 13/111 (11%)
Query: 182 NVLVTSSCDHSIRLW--RKGSCLRCLRGHNGPVLSLSNKLLGEGSSKVLASGGEDSTVRL 239
N + T S D ++RLW + G C+R GH G +LSLS G + +ASG ED T+ +
Sbjct: 516 NYIATGSSDKTVRLWDVQSGECVRVFVGHRGMILSLSMSPDG----RYMASGDEDGTIMM 571
Query: 240 WSLGSSGKRGQHALKATFYGHEKGVNFLSVAGHKTSLLVSMSRDSKVKVWD 290
W L SSG+ GH V L+ + + S+L S S D VK+WD
Sbjct: 572 WDL-SSGR-----CVTPLVGHTSCVWSLAFSS-EGSILASGSADCTVKLWD 615
>Medtr4g105700.1 | transducin/WD40 repeat protein | HC |
chr4:43886721-43877728 | 20130731
Length = 908
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 118/315 (37%), Gaps = 65/315 (20%)
Query: 163 RLFSHNEMSSCRGETQGEQNVLVTSSCDHSIRLWRKGS--CLRCLRGHNGPVLSLSNKLL 220
RL +NE ++ L ++ +R++ S C L GH +L L +
Sbjct: 354 RLVGYNEEVVDMKFVGDDEKFLALATNLEQVRVYDLASMSCSYVLSGHTEIILCLDTCVS 413
Query: 221 GEGSSKVLASGGEDSTVRLWSLGSSGKRGQHALKATFYGHEKGVNFLSVAGHKTSLLVSM 280
G + ++ +G +D+TVRLW S+ G GH V ++ + K VS
Sbjct: 414 SSGRN-LIVTGSKDNTVRLWESESTSCIG------VGIGHMGAVGAIAFSKRKRDFFVSG 466
Query: 281 SRDSKVKVWDTXXXXXXXXXPCVGMTSFRGAPVNMKCHESLLYVAAGSSVTAVDLRTMQK 340
S D +KVW G+ AP+N+K K
Sbjct: 467 SNDHTLKVWSID-----------GLLDDVAAPINLKA----------------------K 493
Query: 341 VITVAVDQSKLYSFDAFPSKSLICTGGYGR-AMLWDIRRNQESAKPD--PITELDGHDGP 397
+ A D+ + S P+ SL+C+G R A +W + PD + GH
Sbjct: 494 AVVAAHDKD-INSVAIAPNDSLVCSGSQDRTACVWRL--------PDLVSVVVFKGHKRG 544
Query: 398 VTMLHMDSYK--IVTGSAE-MVRVWGVDTGVQTMSLLSCLTQDYMGRSNFDAMAIDGCRA 454
+ + +VT S + +R+W + G SCL + + G ++ A+ R
Sbjct: 545 IWSVEFSPVDQCVVTASGDKTIRIWAISDG-------SCL-KTFEGHTSSVLRALFVTRG 596
Query: 455 ITACYCEDRGLLRFW 469
C GL++ W
Sbjct: 597 TQIVSCGADGLVKLW 611
>Medtr4g123597.1 | transducin family protein/WD-40 repeat protein |
HC | chr4:51413416-51422755 | 20130731
Length = 944
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 52/103 (50%), Gaps = 13/103 (12%)
Query: 190 DHSIRLWR--KGSCLRCLRGHNGPVLSLSNKLLGEGSSKVLASGGEDSTVRLWSLGSSGK 247
D SIRLW KG+C L GH G V +L LG +LASG +D+ V LW + G+
Sbjct: 85 DGSIRLWDTDKGTCETTLNGHKGAVTALRYNKLGS----LLASGSKDNDVILWDV--VGE 138
Query: 248 RGQHALKATFYGHEKGVNFLSVAGHKTSLLVSMSRDSKVKVWD 290
G L+ GH V + G LVS S+D ++VWD
Sbjct: 139 TGLFRLR----GHRDQVTDVVFVGFGKK-LVSSSKDKFLRVWD 176
>Medtr4g069090.1 | phospholipase A-2-activating protein | HC |
chr4:25969004-25956257 | 20130731
Length = 757
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 30/145 (20%)
Query: 145 SRDAIQTLSDHKARITCMRLFSHNEMSSCRGETQGEQNVLVTSSCDHSIRLWRKGSCLRC 204
S + +Q+L H+ ++T + + + LV+SS D ++R WR G C+
Sbjct: 99 SGEKVQSLKGHQLQVTGIVV---------------DDGDLVSSSMDCTLRRWRNGQCIET 143
Query: 205 LRGHNGPVLSLSNKLLGEGSSKVLASGGEDSTVRLWSLGSSGKRGQHALKATFYGHEKGV 264
H GP+ ++ GE L +G D+T++ W GK H TF GH V
Sbjct: 144 WEAHKGPIQAVIKLPTGE-----LVTGSSDTTLKTW----KGKTCLH----TFQGHADTV 190
Query: 265 NFLSVAGHKTSLLVSMSRDSKVKVW 289
L+V ++S S D +++W
Sbjct: 191 RGLAVMSDLG--ILSASHDGSLRLW 213
>Medtr2g436510.1 | PP1/PP2A phosphatase pleiotropic regulator PRL1 |
HC | chr2:14198159-14190457 | 20130731
Length = 480
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 119/278 (42%), Gaps = 42/278 (15%)
Query: 203 RCLRGHNGPVLSLSNKLLGEGSSKVLASGGEDSTVRLWSLGSSGKRGQHALKATFYGHEK 262
R + GH G V S++ + S+ A+G D T+++W L S LK T GH +
Sbjct: 164 RVISGHLGWVRSVAV----DPSNTWFATGSADRTIKIWDLASG------VLKLTLTGHIE 213
Query: 263 GVNFLSVAGHKTSLLVSMSRDSKVKVWDTXXXXXXXXXPCVGMTSFRGAPVNMKC---HE 319
V L+++ HK + + S D +VK WD + S+ G + C H
Sbjct: 214 QVRGLAIS-HKHTYMFSAGDDKQVKCWDLEQNKV--------IRSYHGHLSGVYCLAIHP 264
Query: 320 S--LLYVAAGSSVTAV-DLRTMQKVITVAVDQSKLYSFDAFPSKSLICTGGYGRAM-LWD 375
+ +L SV V D+R+ ++ ++ ++ + S P+ + TG + + +WD
Sbjct: 265 TIDILLTGGRDSVCRVWDIRSKMQIHALSGHENTVCSVFTRPTDPQVVTGSHDSTIKMWD 324
Query: 376 IRRNQESAKPDPITELDGHDGPVTML--HMDSYKIVTGSAEMVRVWGVDTGVQTMSLLSC 433
+R + ++ L H V + H + SA+ ++ + + G ++LS
Sbjct: 325 LRYGKT------MSTLTNHKKSVRAMAQHPKEQAFASASADNIKKFTLPKGEFCHNMLS- 377
Query: 434 LTQDYMGRSNFDAMAIDGCRAITACYCEDRGLLRFWDF 471
++ +AMA++ + D G + FWD+
Sbjct: 378 -----QQKTIINAMAVNEEGVMVT--GGDNGSMWFWDW 408
>Medtr1g090827.1 | coatomer subunit alpha-like protein | HC |
chr1:40855860-40850967 | 20130731
Length = 1216
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 30/130 (23%)
Query: 184 LVTSSCDHSIRLW--RKGSCLRCLRGHNGPVLSLSNKLLGEGSSKVLASGGEDSTVRLWS 241
+V++S D +IR+W + +C+ L GHN V+ L ++ S D TVR+W
Sbjct: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCA----LFHPKDDLVVSASLDQTVRVWD 163
Query: 242 LGSSGKR-----------GQH----------ALKATFYGHEKGVNFLSVAGHKT-SLLVS 279
+GS ++ GQ +K GH++GVN+ S H T L+VS
Sbjct: 164 IGSLKRKSASPADDILRLGQMNTDLFGGVDAVVKYVLEGHDRGVNWASF--HPTLPLIVS 221
Query: 280 MSRDSKVKVW 289
+ D +VK+W
Sbjct: 222 AADDRQVKIW 231