Miyakogusa Predicted Gene

Lj2g3v1034630.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1034630.2 Non Characterized Hit- tr|K3YPP0|K3YPP0_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si016232,28.52,8e-17,seg,NULL,CUFF.36071.2
         (676 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g011480.2 | transmembrane protein, putative | HC | chr6:32...   837   0.0  
Medtr6g011480.1 | transmembrane protein, putative | HC | chr6:32...   837   0.0  
Medtr5g019500.1 | transmembrane protein, putative | HC | chr5:73...    80   7e-15
Medtr5g019500.2 | transmembrane protein, putative | HC | chr5:73...    80   8e-15

>Medtr6g011480.2 | transmembrane protein, putative | HC |
           chr6:3264506-3266527 | 20130731
          Length = 673

 Score =  837 bits (2162), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/537 (76%), Positives = 458/537 (85%), Gaps = 13/537 (2%)

Query: 145 LHSTT-ASLRSTLLPIPFSPIDEIIKQHFLSSEPLHNQHHLYLINLPNS--DPKPSDHKP 201
           LH TT  SLR++LL  P+S ID+II+ HF +  P  N  HLYLINLP    DP     KP
Sbjct: 145 LHVTTPTSLRTSLLSFPYSSIDKIIQNHFNTLSPEPNGFHLYLINLPEPKIDPITKTVKP 204

Query: 202 YAYTYSPSAAD-SSPSFTNCLGTFWTSDQRYFWIDLAAGPVDYGPAISGDGVIPRGEFHP 260
           YAY+Y+ +++D SSP FTNCLGTFW S+ RYFWIDL+AGPVDYGPAISGDG+IPRGEFHP
Sbjct: 205 YAYSYTSTSSDNSSPGFTNCLGTFWNSENRYFWIDLSAGPVDYGPAISGDGLIPRGEFHP 264

Query: 261 FATLHSLRPKSDKALVADIASLISSAYQVFLAPSLRIPVVFDNTLVVQFIHIYSGEEKDK 320
           FATL+  RPK D+++ AD+AS++ S+YQ FLAPSLRIPV FD  LVVQF+H+Y G+EK+K
Sbjct: 265 FATLNG-RPKGDRSISADLASIVMSSYQTFLAPSLRIPVGFDEKLVVQFVHVYGGDEKEK 323

Query: 321 DLSGLDWKAIEKSFRDEGKGNGLLLGDQKLSFNVYDIKYSECPVCSFAVSRAMNSFTSRF 380
           DL   DWK IEK FRD   GN +L  DQKL F VY++KY EC +CSFAVS+++NS+TSRF
Sbjct: 324 DL---DWKLIEKRFRD---GN-VLFRDQKLEFRVYEVKYDECSICSFAVSKSINSYTSRF 376

Query: 381 LFDNYTLIVSEYLDSKRLHQILSDSADEVRKMGGVPEE-DFGRVVPVYVFDLDHTSLLLL 439
           LFDNYTLIVSEYLDSKRLHQILSD+ DE+RK+ G+PEE DFGRVVPVYVFDLD+TSLL+L
Sbjct: 377 LFDNYTLIVSEYLDSKRLHQILSDNGDEMRKIAGIPEEEDFGRVVPVYVFDLDYTSLLML 436

Query: 440 DRYHQSVAFKDMVIAVRTRNTQTVSDYSCNGRHVFTHTRELERPLVGSILQSMWGVSPTH 499
           DRYHQSVAFKDMVIAVRTRNTQTVSDYSCNGRHVF HTRELERP+VGS+LQSMWGVSPTH
Sbjct: 437 DRYHQSVAFKDMVIAVRTRNTQTVSDYSCNGRHVFVHTRELERPIVGSVLQSMWGVSPTH 496

Query: 500 MSWSPRHNSTLVDYTWSMGQTPFGPFSQLSSLSFVQKDAAKRNVLLTSLNYSISSAMDVL 559
           ++WSP HNSTLVDYTWSMGQTPFGPFSQ+SSLSFVQKDAAKRNVLLTSLNYS+SSA DVL
Sbjct: 497 LNWSPLHNSTLVDYTWSMGQTPFGPFSQISSLSFVQKDAAKRNVLLTSLNYSVSSAHDVL 556

Query: 560 QSIETHGGDRKLLKQKQHAEFVQRLNLFKYKLNKAVSALSHLDFEMALFYYRSSDHDLYA 619
           QS+ETHGGDR LLK KQHAEFVQR NLFKYKLNKAVSALSHLD+EMALFY RSSDHDLYA
Sbjct: 557 QSLETHGGDRNLLKPKQHAEFVQRWNLFKYKLNKAVSALSHLDYEMALFYLRSSDHDLYA 616

Query: 620 IHSIVYHASQEIEASLVCFKDPAFPWXXXXXXXXXXXXXXYVYAKRDKLFRNKRKQF 676
           IHSIVYHASQEIEASL CFKDP FPW              YVYAKRDKLFRNKRKQF
Sbjct: 617 IHSIVYHASQEIEASLTCFKDPPFPWFSVSTSAVAFIAISYVYAKRDKLFRNKRKQF 673


>Medtr6g011480.1 | transmembrane protein, putative | HC |
           chr6:3264506-3266527 | 20130731
          Length = 673

 Score =  837 bits (2162), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/537 (76%), Positives = 458/537 (85%), Gaps = 13/537 (2%)

Query: 145 LHSTT-ASLRSTLLPIPFSPIDEIIKQHFLSSEPLHNQHHLYLINLPNS--DPKPSDHKP 201
           LH TT  SLR++LL  P+S ID+II+ HF +  P  N  HLYLINLP    DP     KP
Sbjct: 145 LHVTTPTSLRTSLLSFPYSSIDKIIQNHFNTLSPEPNGFHLYLINLPEPKIDPITKTVKP 204

Query: 202 YAYTYSPSAAD-SSPSFTNCLGTFWTSDQRYFWIDLAAGPVDYGPAISGDGVIPRGEFHP 260
           YAY+Y+ +++D SSP FTNCLGTFW S+ RYFWIDL+AGPVDYGPAISGDG+IPRGEFHP
Sbjct: 205 YAYSYTSTSSDNSSPGFTNCLGTFWNSENRYFWIDLSAGPVDYGPAISGDGLIPRGEFHP 264

Query: 261 FATLHSLRPKSDKALVADIASLISSAYQVFLAPSLRIPVVFDNTLVVQFIHIYSGEEKDK 320
           FATL+  RPK D+++ AD+AS++ S+YQ FLAPSLRIPV FD  LVVQF+H+Y G+EK+K
Sbjct: 265 FATLNG-RPKGDRSISADLASIVMSSYQTFLAPSLRIPVGFDEKLVVQFVHVYGGDEKEK 323

Query: 321 DLSGLDWKAIEKSFRDEGKGNGLLLGDQKLSFNVYDIKYSECPVCSFAVSRAMNSFTSRF 380
           DL   DWK IEK FRD   GN +L  DQKL F VY++KY EC +CSFAVS+++NS+TSRF
Sbjct: 324 DL---DWKLIEKRFRD---GN-VLFRDQKLEFRVYEVKYDECSICSFAVSKSINSYTSRF 376

Query: 381 LFDNYTLIVSEYLDSKRLHQILSDSADEVRKMGGVPEE-DFGRVVPVYVFDLDHTSLLLL 439
           LFDNYTLIVSEYLDSKRLHQILSD+ DE+RK+ G+PEE DFGRVVPVYVFDLD+TSLL+L
Sbjct: 377 LFDNYTLIVSEYLDSKRLHQILSDNGDEMRKIAGIPEEEDFGRVVPVYVFDLDYTSLLML 436

Query: 440 DRYHQSVAFKDMVIAVRTRNTQTVSDYSCNGRHVFTHTRELERPLVGSILQSMWGVSPTH 499
           DRYHQSVAFKDMVIAVRTRNTQTVSDYSCNGRHVF HTRELERP+VGS+LQSMWGVSPTH
Sbjct: 437 DRYHQSVAFKDMVIAVRTRNTQTVSDYSCNGRHVFVHTRELERPIVGSVLQSMWGVSPTH 496

Query: 500 MSWSPRHNSTLVDYTWSMGQTPFGPFSQLSSLSFVQKDAAKRNVLLTSLNYSISSAMDVL 559
           ++WSP HNSTLVDYTWSMGQTPFGPFSQ+SSLSFVQKDAAKRNVLLTSLNYS+SSA DVL
Sbjct: 497 LNWSPLHNSTLVDYTWSMGQTPFGPFSQISSLSFVQKDAAKRNVLLTSLNYSVSSAHDVL 556

Query: 560 QSIETHGGDRKLLKQKQHAEFVQRLNLFKYKLNKAVSALSHLDFEMALFYYRSSDHDLYA 619
           QS+ETHGGDR LLK KQHAEFVQR NLFKYKLNKAVSALSHLD+EMALFY RSSDHDLYA
Sbjct: 557 QSLETHGGDRNLLKPKQHAEFVQRWNLFKYKLNKAVSALSHLDYEMALFYLRSSDHDLYA 616

Query: 620 IHSIVYHASQEIEASLVCFKDPAFPWXXXXXXXXXXXXXXYVYAKRDKLFRNKRKQF 676
           IHSIVYHASQEIEASL CFKDP FPW              YVYAKRDKLFRNKRKQF
Sbjct: 617 IHSIVYHASQEIEASLTCFKDPPFPWFSVSTSAVAFIAISYVYAKRDKLFRNKRKQF 673


>Medtr5g019500.1 | transmembrane protein, putative | HC |
           chr5:7363922-7383422 | 20130731
          Length = 939

 Score = 80.1 bits (196), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 107/232 (46%), Gaps = 18/232 (7%)

Query: 385 YTLIVSEYLDSKRLHQILSDSADEVRKMGGVPEEDFGR------VVPVYVFDLDHTSLLL 438
           Y   +  YLDS     IL      + K G +     GR      ++ V +F   H+  LL
Sbjct: 649 YRKTIRTYLDS----SILQYQLQRLNKHGSLK----GRHAHSRSMLEVPIFWFIHSEPLL 700

Query: 439 LDRYHQSVAFKDMVIAVRTRNTQTVSDYSCNGRHVFTHTRELERPLVGSILQSMWGVSPT 498
           LD++ Q++A  DM+I V++  +   S   CNG  +  + R+  +  V +  + + G+ P 
Sbjct: 701 LDKHFQAIALSDMIIVVQSEPSSWESHLHCNGHSLLLNLRQPIKAAVAATAEHLAGLLPL 760

Query: 499 HMSWSPRHNSTLVDYTWSMGQTPFGPFSQLSSLSFVQKDAAKRNVLLTSLNYSI---SSA 555
           H+ +   H + + D+ WS G  PF   SQ   +S  Q D+  R+ ++T+L  SI   +SA
Sbjct: 761 HLVYGQAHETAMEDWIWSAGCNPFSATSQGWHISQFQSDSIARSYVITTLEESILLVNSA 820

Query: 556 MDVLQSIETHGGDRKLLKQKQHAEFVQRLNLFKYKLNKAVSALSHLDFEMAL 607
           +  L    T     K+ + ++H E V + N       +A +    L +  AL
Sbjct: 821 IHRLLMERTTQNTFKIFQSQEH-ELVNKYNYVVSLWRRASTVTGELRYVDAL 871


>Medtr5g019500.2 | transmembrane protein, putative | HC |
           chr5:7366072-7383626 | 20130731
          Length = 762

 Score = 79.7 bits (195), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 107/232 (46%), Gaps = 18/232 (7%)

Query: 385 YTLIVSEYLDSKRLHQILSDSADEVRKMGGVPEEDFGR------VVPVYVFDLDHTSLLL 438
           Y   +  YLDS     IL      + K G +     GR      ++ V +F   H+  LL
Sbjct: 472 YRKTIRTYLDSS----ILQYQLQRLNKHGSLK----GRHAHSRSMLEVPIFWFIHSEPLL 523

Query: 439 LDRYHQSVAFKDMVIAVRTRNTQTVSDYSCNGRHVFTHTRELERPLVGSILQSMWGVSPT 498
           LD++ Q++A  DM+I V++  +   S   CNG  +  + R+  +  V +  + + G+ P 
Sbjct: 524 LDKHFQAIALSDMIIVVQSEPSSWESHLHCNGHSLLLNLRQPIKAAVAATAEHLAGLLPL 583

Query: 499 HMSWSPRHNSTLVDYTWSMGQTPFGPFSQLSSLSFVQKDAAKRNVLLTSLNYSI---SSA 555
           H+ +   H + + D+ WS G  PF   SQ   +S  Q D+  R+ ++T+L  SI   +SA
Sbjct: 584 HLVYGQAHETAMEDWIWSAGCNPFSATSQGWHISQFQSDSIARSYVITTLEESILLVNSA 643

Query: 556 MDVLQSIETHGGDRKLLKQKQHAEFVQRLNLFKYKLNKAVSALSHLDFEMAL 607
           +  L    T     K+ + ++H E V + N       +A +    L +  AL
Sbjct: 644 IHRLLMERTTQNTFKIFQSQEH-ELVNKYNYVVSLWRRASTVTGELRYVDAL 694