Miyakogusa Predicted Gene

Lj2g3v1024280.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1024280.2 Non Characterized Hit- tr|C6TL13|C6TL13_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.36807
PE,85.76,0,TIGR00275: flavoprotein, HI0933 family,Conserved
hypothetical protein CHP00275, flavoprotein HI0933-,CUFF.36019.2
         (324 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g011270.1 | HI0933 family flavoprotein | HC | chr6:3110457...   555   e-158
Medtr6g011270.2 | HI0933 family flavoprotein | HC | chr6:3110457...   542   e-154

>Medtr6g011270.1 | HI0933 family flavoprotein | HC |
           chr6:3110457-3116751 | 20130731
          Length = 479

 Score =  555 bits (1431), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 262/324 (80%), Positives = 298/324 (91%)

Query: 1   MSWFTSHGVELKIEDDGRVFPVSDSSSSIIDCLMSEANRTGVSMQTKKTVTGVSILSNGK 60
           MSWFTSHGVELKIEDDGR FPVS+SSSS+IDCLM+E  R GVSMQTKK VT VS+LS GK
Sbjct: 140 MSWFTSHGVELKIEDDGRAFPVSNSSSSVIDCLMTEVQRRGVSMQTKKNVTAVSVLSCGK 199

Query: 61  FLLEVKQQLADHAEHVEADYLLIASGSTRQGYTLASQLGHSIVDPVPSLLTFKIEDLRLR 120
           FLLE+KQ  A  +E VE DYLLIA+GS+RQGY +ASQLGHSIV+P+PSL TFKIEDLRLR
Sbjct: 200 FLLEIKQLPAGSSEQVEVDYLLIATGSSRQGYEIASQLGHSIVEPMPSLFTFKIEDLRLR 259

Query: 121 ELSGVTFPKVKVRLKLDSIQRNIPELAQVGPMLVTHWGLSGPAILRLSAWGARYLFSSGY 180
           ELSGV+FPKVKVRLKLDS+Q+NIP+L QVGP+L+THWGLSGPAILRLSAWGARYLFSSGY
Sbjct: 260 ELSGVSFPKVKVRLKLDSLQKNIPQLTQVGPLLITHWGLSGPAILRLSAWGARYLFSSGY 319

Query: 181 KGRLIVDFVPDLHLESLKSLLTHHKHQFAKQKVLNSYPPVFGISKRFWSYVLERQGISGD 240
           KGRLIVDF+PD+H+ESLK++++ HK QFAKQKV+NS P  FGI+KRFWSY+LERQG+SGD
Sbjct: 320 KGRLIVDFIPDVHIESLKTIISRHKLQFAKQKVVNSCPLEFGITKRFWSYLLERQGLSGD 379

Query: 241 ILWASISNSSLMSVGSLLKECMIEITGKGQFKDEFVTAGGVPLSEISLKTMESKICSHLF 300
           ILWASISN++L+S+GSLLK+C  EI GKG FKDEFVTAGGVPLSE+SL TM+SKICS+LF
Sbjct: 380 ILWASISNNALISIGSLLKDCTFEIKGKGPFKDEFVTAGGVPLSEVSLNTMKSKICSNLF 439

Query: 301 FAGEILNVDGVTGGFNFQNAWSGG 324
           FAGEILNVDGVTGGFNFQNAWSGG
Sbjct: 440 FAGEILNVDGVTGGFNFQNAWSGG 463


>Medtr6g011270.2 | HI0933 family flavoprotein | HC |
           chr6:3110457-3116768 | 20130731
          Length = 461

 Score =  542 bits (1397), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 256/318 (80%), Positives = 292/318 (91%)

Query: 1   MSWFTSHGVELKIEDDGRVFPVSDSSSSIIDCLMSEANRTGVSMQTKKTVTGVSILSNGK 60
           MSWFTSHGVELKIEDDGR FPVS+SSSS+IDCLM+E  R GVSMQTKK VT VS+LS GK
Sbjct: 140 MSWFTSHGVELKIEDDGRAFPVSNSSSSVIDCLMTEVQRRGVSMQTKKNVTAVSVLSCGK 199

Query: 61  FLLEVKQQLADHAEHVEADYLLIASGSTRQGYTLASQLGHSIVDPVPSLLTFKIEDLRLR 120
           FLLE+KQ  A  +E VE DYLLIA+GS+RQGY +ASQLGHSIV+P+PSL TFKIEDLRLR
Sbjct: 200 FLLEIKQLPAGSSEQVEVDYLLIATGSSRQGYEIASQLGHSIVEPMPSLFTFKIEDLRLR 259

Query: 121 ELSGVTFPKVKVRLKLDSIQRNIPELAQVGPMLVTHWGLSGPAILRLSAWGARYLFSSGY 180
           ELSGV+FPKVKVRLKLDS+Q+NIP+L QVGP+L+THWGLSGPAILRLSAWGARYLFSSGY
Sbjct: 260 ELSGVSFPKVKVRLKLDSLQKNIPQLTQVGPLLITHWGLSGPAILRLSAWGARYLFSSGY 319

Query: 181 KGRLIVDFVPDLHLESLKSLLTHHKHQFAKQKVLNSYPPVFGISKRFWSYVLERQGISGD 240
           KGRLIVDF+PD+H+ESLK++++ HK QFAKQKV+NS P  FGI+KRFWSY+LERQG+SGD
Sbjct: 320 KGRLIVDFIPDVHIESLKTIISRHKLQFAKQKVVNSCPLEFGITKRFWSYLLERQGLSGD 379

Query: 241 ILWASISNSSLMSVGSLLKECMIEITGKGQFKDEFVTAGGVPLSEISLKTMESKICSHLF 300
           ILWASISN++L+S+GSLLK+C  EI GKG FKDEFVTAGGVPLSE+SL TM+SKICS+LF
Sbjct: 380 ILWASISNNALISIGSLLKDCTFEIKGKGPFKDEFVTAGGVPLSEVSLNTMKSKICSNLF 439

Query: 301 FAGEILNVDGVTGGFNFQ 318
           FAGEILNVDGVTGGFNFQ
Sbjct: 440 FAGEILNVDGVTGGFNFQ 457