Miyakogusa Predicted Gene

Lj2g3v1022790.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1022790.1 Non Characterized Hit- tr|D8QYY2|D8QYY2_SELML
Putative uncharacterized protein OS=Selaginella
moelle,62.5,2e-18,MAT1,Cdk-activating kinase assembly factor MAT1,
centre; seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY ,CUFF.36006.1
         (133 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g006900.3 | CDK-activating kinase assembly factor MAT1, pu...   112   1e-25
Medtr6g006900.2 | CDK-activating kinase assembly factor MAT1, pu...   112   1e-25
Medtr6g006900.1 | CDK-activating kinase assembly factor MAT1, pu...   112   1e-25
Medtr6g006900.4 | CDK-activating kinase assembly factor MAT1, pu...   112   1e-25
Medtr6g006900.5 | CDK-activating kinase assembly factor MAT1, pu...    65   1e-11
Medtr6g006900.6 | CDK-activating kinase assembly factor MAT1, pu...    65   1e-11

>Medtr6g006900.3 | CDK-activating kinase assembly factor MAT1,
          putative | HC | chr6:1260011-1265928 | 20130731
          Length = 185

 Score =  112 bits (280), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 53/62 (85%), Positives = 58/62 (93%), Gaps = 2/62 (3%)

Query: 3  RKRAG--FNKREDDFPSLREYNDYLEQVEDMTFNLIEGVDVAAIEAKIAKYQEENSEQIM 60
          RKR    FNKREDDFPSL+EYNDYLE+VEDMTFNLIEG+DVAAIEA+IAKYQEENSEQIM
Sbjct: 16 RKRIASIFNKREDDFPSLKEYNDYLEEVEDMTFNLIEGIDVAAIEARIAKYQEENSEQIM 75

Query: 61 VN 62
          +N
Sbjct: 76 IN 77


>Medtr6g006900.2 | CDK-activating kinase assembly factor MAT1,
          putative | HC | chr6:1260011-1265928 | 20130731
          Length = 185

 Score =  112 bits (280), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 53/62 (85%), Positives = 58/62 (93%), Gaps = 2/62 (3%)

Query: 3  RKRAG--FNKREDDFPSLREYNDYLEQVEDMTFNLIEGVDVAAIEAKIAKYQEENSEQIM 60
          RKR    FNKREDDFPSL+EYNDYLE+VEDMTFNLIEG+DVAAIEA+IAKYQEENSEQIM
Sbjct: 16 RKRIASIFNKREDDFPSLKEYNDYLEEVEDMTFNLIEGIDVAAIEARIAKYQEENSEQIM 75

Query: 61 VN 62
          +N
Sbjct: 76 IN 77


>Medtr6g006900.1 | CDK-activating kinase assembly factor MAT1,
          putative | HC | chr6:1260011-1265928 | 20130731
          Length = 185

 Score =  112 bits (280), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 53/62 (85%), Positives = 58/62 (93%), Gaps = 2/62 (3%)

Query: 3  RKRAG--FNKREDDFPSLREYNDYLEQVEDMTFNLIEGVDVAAIEAKIAKYQEENSEQIM 60
          RKR    FNKREDDFPSL+EYNDYLE+VEDMTFNLIEG+DVAAIEA+IAKYQEENSEQIM
Sbjct: 16 RKRIASIFNKREDDFPSLKEYNDYLEEVEDMTFNLIEGIDVAAIEARIAKYQEENSEQIM 75

Query: 61 VN 62
          +N
Sbjct: 76 IN 77


>Medtr6g006900.4 | CDK-activating kinase assembly factor MAT1,
          putative | HC | chr6:1260011-1265928 | 20130731
          Length = 185

 Score =  112 bits (280), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 53/62 (85%), Positives = 58/62 (93%), Gaps = 2/62 (3%)

Query: 3  RKRAG--FNKREDDFPSLREYNDYLEQVEDMTFNLIEGVDVAAIEAKIAKYQEENSEQIM 60
          RKR    FNKREDDFPSL+EYNDYLE+VEDMTFNLIEG+DVAAIEA+IAKYQEENSEQIM
Sbjct: 16 RKRIASIFNKREDDFPSLKEYNDYLEEVEDMTFNLIEGIDVAAIEARIAKYQEENSEQIM 75

Query: 61 VN 62
          +N
Sbjct: 76 IN 77


>Medtr6g006900.5 | CDK-activating kinase assembly factor MAT1,
          putative | HC | chr6:1260011-1265928 | 20130731
          Length = 140

 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 29/32 (90%), Positives = 32/32 (100%)

Query: 31 MTFNLIEGVDVAAIEAKIAKYQEENSEQIMVN 62
          MTFNLIEG+DVAAIEA+IAKYQEENSEQIM+N
Sbjct: 1  MTFNLIEGIDVAAIEARIAKYQEENSEQIMIN 32


>Medtr6g006900.6 | CDK-activating kinase assembly factor MAT1,
          putative | HC | chr6:1260011-1265928 | 20130731
          Length = 140

 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 29/32 (90%), Positives = 32/32 (100%)

Query: 31 MTFNLIEGVDVAAIEAKIAKYQEENSEQIMVN 62
          MTFNLIEG+DVAAIEA+IAKYQEENSEQIM+N
Sbjct: 1  MTFNLIEGIDVAAIEARIAKYQEENSEQIMIN 32