Miyakogusa Predicted Gene

Lj2g3v1022560.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1022560.2 Non Characterized Hit- tr|I1IAX8|I1IAX8_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,32.54,2e-17,coiled-coil,NULL,CUFF.35983.2
         (264 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g107200.1 | hypothetical protein | HC | chr4:44270581-4426...   169   3e-42

>Medtr4g107200.1 | hypothetical protein | HC |
           chr4:44270581-44265275 | 20130731
          Length = 621

 Score =  169 bits (428), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/222 (48%), Positives = 140/222 (63%), Gaps = 15/222 (6%)

Query: 1   MMALKKAYADVILNTAKEAAARVMASERRALQYQSELAAVKDEALHMLLRLKNMIDAKTA 60
           + ALKKAYAD+ILNTAKEAAAR++ SER++  +Q ELA+ KDEALHMLLRLK M+D+K  
Sbjct: 7   LTALKKAYADIILNTAKEAAARILVSERKSTHFQQELASTKDEALHMLLRLKQMMDSKVK 66

Query: 61  ESETTSLKQQSKIEELEAQLNEAEDVITDLREELKHVRRELEKTKNIQINSLDGQSVK-Q 119
           E+E TSL QQ KI+ELEAQL EAE+++ DLR EL+  + ELE     Q N    Q++K +
Sbjct: 67  EAELTSLSQQKKIDELEAQLQEAEEIVRDLRAELRETQAELENVTKHQTNPPVEQNMKDE 126

Query: 120 VAS----FQES---AKPGALALFSKKEFECVTSCDVKNKSLTVNSLD--EKCCNSKKQTE 170
           VA+     QE+      G +      +FE V S  V ++  TVN  D   K C S    +
Sbjct: 127 VAANGNFMQENRLDPSDGTVHSAPVLQFEPV-SVPV-SRYPTVNGTDNGSKFCGSH---D 181

Query: 171 HLCRSNLDDSDFTSFLMRSKEAELCKNGVTQRTHALEGNLLD 212
           H     + + DF S ++R KE EL +NG TQR  ALE +L D
Sbjct: 182 HANSCYIHNPDFASIVIRRKEPELYRNGCTQRIRALERSLFD 223