Miyakogusa Predicted Gene

Lj2g3v1022350.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1022350.2 Non Characterized Hit- tr|I0YZF3|I0YZF3_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,42.59,7e-18,seg,NULL; SIN3B-RELATED,NULL,CUFF.35987.2
         (136 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g008970.1 | paired amphipathic helix SIN3-like protein | H...   199   4e-52
Medtr8g069945.1 | paired amphipathic helix SIN3-like protein | H...   157   3e-39
Medtr8g062700.3 | paired amphipathic helix SIN3-like protein | H...   156   4e-39
Medtr8g062700.1 | paired amphipathic helix SIN3-like protein | H...   156   4e-39
Medtr8g062700.4 | paired amphipathic helix SIN3-like protein | H...   156   4e-39
Medtr8g062700.2 | paired amphipathic helix SIN3-like protein | H...   156   4e-39
Medtr5g036670.1 | paired amphipathic helix SIN3-like protein | H...   154   3e-38
Medtr5g036670.2 | paired amphipathic helix SIN3-like protein | H...   154   3e-38

>Medtr6g008970.1 | paired amphipathic helix SIN3-like protein | HC |
            chr6:2536170-2526712 | 20130731
          Length = 1387

 Score =  199 bits (507), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 95/114 (83%), Positives = 104/114 (91%)

Query: 19   MPKHVSAVSFAEEMKDSRVFYGNDDFYALFRLHQILYERILSAKINSMSAEMKWKAKDAS 78
            + KHVSAVSF E++KDSRVFYGNDDF+ LFRLHQILYERILSAK NS SAE+KWK KDAS
Sbjct: 1081 LTKHVSAVSFVEDVKDSRVFYGNDDFFVLFRLHQILYERILSAKENSTSAEIKWKTKDAS 1140

Query: 79   SPDPYSRFMNALYNLLDGSVENSKFEDECRAITGNQSYVLFTLDKLIYKLIRQV 132
            S D Y+RFM+ALYNLLDGS EN+KFEDECRAI GNQSYVLFTLDKLIYKLIRQ+
Sbjct: 1141 STDLYARFMDALYNLLDGSAENAKFEDECRAILGNQSYVLFTLDKLIYKLIRQL 1194


>Medtr8g069945.1 | paired amphipathic helix SIN3-like protein | HC |
           chr8:29627875-29624593 | 20130731
          Length = 422

 Score =  157 bits (397), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 78/113 (69%), Positives = 92/113 (81%), Gaps = 2/113 (1%)

Query: 21  KHVSAVSFAEEMKDSRVFYGNDDFYALFRLHQILYERILSAKINSMSAEMKWKA-KDASS 79
           K+V  V F  + ++ ++FYGND FY LFRLHQ LYERI SAKINS SAE KW+A  D SS
Sbjct: 300 KYVGPV-FHGKEENVQIFYGNDSFYVLFRLHQTLYERIRSAKINSSSAEKKWRASNDTSS 358

Query: 80  PDPYSRFMNALYNLLDGSVENSKFEDECRAITGNQSYVLFTLDKLIYKLIRQV 132
            D Y+RFMN+LY+LLDGS +NSKFED+CRAI G QSYVLFTLDKLIYKL++QV
Sbjct: 359 TDRYARFMNSLYSLLDGSSDNSKFEDDCRAIIGTQSYVLFTLDKLIYKLVKQV 411


>Medtr8g062700.3 | paired amphipathic helix SIN3-like protein | HC |
            chr8:26215827-26198402 | 20130731
          Length = 1405

 Score =  156 bits (395), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 78/113 (69%), Positives = 93/113 (82%), Gaps = 2/113 (1%)

Query: 21   KHVSAVSFAEEMKDSRVFYGNDDFYALFRLHQILYERILSAKINSMSAEMKWKA-KDASS 79
            K+VS V   +E ++ ++FYGND FY LFRLHQ LYERI SAKINS SAE KW+A  D SS
Sbjct: 1103 KYVSPVFHGKE-ENVQIFYGNDSFYVLFRLHQTLYERIRSAKINSSSAEKKWRASNDTSS 1161

Query: 80   PDPYSRFMNALYNLLDGSVENSKFEDECRAITGNQSYVLFTLDKLIYKLIRQV 132
             D Y+RFMN+LY+LLDGS +NSKFED+CRAI G QSYVLFTLDKLIYKL++Q+
Sbjct: 1162 TDRYARFMNSLYSLLDGSSDNSKFEDDCRAIIGTQSYVLFTLDKLIYKLVKQL 1214


>Medtr8g062700.1 | paired amphipathic helix SIN3-like protein | HC |
            chr8:26215827-26198402 | 20130731
          Length = 1406

 Score =  156 bits (395), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 78/113 (69%), Positives = 93/113 (82%), Gaps = 2/113 (1%)

Query: 21   KHVSAVSFAEEMKDSRVFYGNDDFYALFRLHQILYERILSAKINSMSAEMKWKA-KDASS 79
            K+VS V   +E ++ ++FYGND FY LFRLHQ LYERI SAKINS SAE KW+A  D SS
Sbjct: 1104 KYVSPVFHGKE-ENVQIFYGNDSFYVLFRLHQTLYERIRSAKINSSSAEKKWRASNDTSS 1162

Query: 80   PDPYSRFMNALYNLLDGSVENSKFEDECRAITGNQSYVLFTLDKLIYKLIRQV 132
             D Y+RFMN+LY+LLDGS +NSKFED+CRAI G QSYVLFTLDKLIYKL++Q+
Sbjct: 1163 TDRYARFMNSLYSLLDGSSDNSKFEDDCRAIIGTQSYVLFTLDKLIYKLVKQL 1215


>Medtr8g062700.4 | paired amphipathic helix SIN3-like protein | HC |
            chr8:26215827-26198402 | 20130731
          Length = 1406

 Score =  156 bits (395), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 78/113 (69%), Positives = 93/113 (82%), Gaps = 2/113 (1%)

Query: 21   KHVSAVSFAEEMKDSRVFYGNDDFYALFRLHQILYERILSAKINSMSAEMKWKA-KDASS 79
            K+VS V   +E ++ ++FYGND FY LFRLHQ LYERI SAKINS SAE KW+A  D SS
Sbjct: 1104 KYVSPVFHGKE-ENVQIFYGNDSFYVLFRLHQTLYERIRSAKINSSSAEKKWRASNDTSS 1162

Query: 80   PDPYSRFMNALYNLLDGSVENSKFEDECRAITGNQSYVLFTLDKLIYKLIRQV 132
             D Y+RFMN+LY+LLDGS +NSKFED+CRAI G QSYVLFTLDKLIYKL++Q+
Sbjct: 1163 TDRYARFMNSLYSLLDGSSDNSKFEDDCRAIIGTQSYVLFTLDKLIYKLVKQL 1215


>Medtr8g062700.2 | paired amphipathic helix SIN3-like protein | HC |
            chr8:26215827-26198402 | 20130731
          Length = 1405

 Score =  156 bits (395), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 78/113 (69%), Positives = 93/113 (82%), Gaps = 2/113 (1%)

Query: 21   KHVSAVSFAEEMKDSRVFYGNDDFYALFRLHQILYERILSAKINSMSAEMKWKA-KDASS 79
            K+VS V   +E ++ ++FYGND FY LFRLHQ LYERI SAKINS SAE KW+A  D SS
Sbjct: 1103 KYVSPVFHGKE-ENVQIFYGNDSFYVLFRLHQTLYERIRSAKINSSSAEKKWRASNDTSS 1161

Query: 80   PDPYSRFMNALYNLLDGSVENSKFEDECRAITGNQSYVLFTLDKLIYKLIRQV 132
             D Y+RFMN+LY+LLDGS +NSKFED+CRAI G QSYVLFTLDKLIYKL++Q+
Sbjct: 1162 TDRYARFMNSLYSLLDGSSDNSKFEDDCRAIIGTQSYVLFTLDKLIYKLVKQL 1214


>Medtr5g036670.1 | paired amphipathic helix SIN3-like protein | HC |
            chr5:16035547-16020987 | 20130731
          Length = 1409

 Score =  154 bits (388), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 77/115 (66%), Positives = 90/115 (78%), Gaps = 2/115 (1%)

Query: 19   MPKHVSAVSFAEEMKDSRVFYGNDDFYALFRLHQILYERILSAKINSMSAEMKWKA-KDA 77
            + KHV  V   E+ K+SRVFYGND FY L RLHQ LYERI +AK+NS S E KWKA  + 
Sbjct: 1107 LAKHVPPVLHVED-KNSRVFYGNDSFYVLIRLHQTLYERIHAAKVNSSSTERKWKASNNT 1165

Query: 78   SSPDPYSRFMNALYNLLDGSVENSKFEDECRAITGNQSYVLFTLDKLIYKLIRQV 132
            SS D Y RFM ALY+LLDGS +NSKFED+CRAI G QSY+LFTLDKLIYKL++Q+
Sbjct: 1166 SSTDQYDRFMIALYSLLDGSSDNSKFEDDCRAIIGTQSYLLFTLDKLIYKLVKQL 1220


>Medtr5g036670.2 | paired amphipathic helix SIN3-like protein | HC |
            chr5:16035542-16021022 | 20130731
          Length = 1409

 Score =  154 bits (388), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 77/115 (66%), Positives = 90/115 (78%), Gaps = 2/115 (1%)

Query: 19   MPKHVSAVSFAEEMKDSRVFYGNDDFYALFRLHQILYERILSAKINSMSAEMKWKA-KDA 77
            + KHV  V   E+ K+SRVFYGND FY L RLHQ LYERI +AK+NS S E KWKA  + 
Sbjct: 1107 LAKHVPPVLHVED-KNSRVFYGNDSFYVLIRLHQTLYERIHAAKVNSSSTERKWKASNNT 1165

Query: 78   SSPDPYSRFMNALYNLLDGSVENSKFEDECRAITGNQSYVLFTLDKLIYKLIRQV 132
            SS D Y RFM ALY+LLDGS +NSKFED+CRAI G QSY+LFTLDKLIYKL++Q+
Sbjct: 1166 SSTDQYDRFMIALYSLLDGSSDNSKFEDDCRAIIGTQSYLLFTLDKLIYKLVKQL 1220