Miyakogusa Predicted Gene

Lj2g3v1022320.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1022320.1 Non Characterized Hit- tr|K3YU08|K3YU08_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si017754,26.57,3e-18,seg,NULL; coiled-coil,NULL; DUF760,Protein of
unknown function DUF760,CUFF.35971.1
         (360 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g008890.1 | Hop-interacting protein THI043 | HC | chr6:249...   446   e-125
Medtr4g071610.1 | Hop-interacting protein THI043 | HC | chr4:270...   446   e-125
Medtr3g115240.1 | DUF760 family protein | HC | chr3:53877908-538...    79   6e-15

>Medtr6g008890.1 | Hop-interacting protein THI043 | HC |
           chr6:2492614-2497579 | 20130731
          Length = 356

 Score =  446 bits (1148), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 253/372 (68%), Positives = 283/372 (76%), Gaps = 28/372 (7%)

Query: 1   MAA--LSWRPFILSRLTDXXXXXXXXXXXXXX------XXXXXXCFLTSCY-ADGFXXXX 51
           MAA  +S +PFILSR+T+                           F TSC+  DG     
Sbjct: 1   MAASTISSQPFILSRITNNPSHPSLHHPLPSLFFLRRPPHRRPFLFATSCHHVDG----- 55

Query: 52  XXXXXXXXXXTRKSTFDRGFTVIANMLRRIEPLDNSVISKGVSDAARDSMKQTISTMLGL 111
                     TRKSTF+RGFTVI+ MLRRI+PLDNSVISKGVS+A++DSMKQTISTMLGL
Sbjct: 56  -----DDVVSTRKSTFNRGFTVISKMLRRIKPLDNSVISKGVSEASKDSMKQTISTMLGL 110

Query: 112 LPSDHFSVTVTVSKHPLHRLLVSSIITGYTLWNAEYRMSLTRNLDIASPCGARDSDCEKR 171
           LPSDHF VTV+    PLHRLLVSSIITGYTLWNAEYRMSLTRNL+++     + +DCE  
Sbjct: 111 LPSDHFDVTVSFEIQPLHRLLVSSIITGYTLWNAEYRMSLTRNLEMSH--ADQGADCETP 168

Query: 172 SEILEVKGGGEDGGEI-EVASDLGLKDLENCSSS--PRVFGDLPPQALNYIQQLQSELTN 228
            E LE+KGG E+ GE  +V SDLGL + E CSSS    VFGDLPPQAL YIQQLQSELTN
Sbjct: 169 LESLELKGGEEEHGETEKVVSDLGLANSEICSSSTGAGVFGDLPPQALKYIQQLQSELTN 228

Query: 229 VKEELNARKQEMMQLEYDRGIRNNLLEYLRSLDPEMVTELSRPSSVEVEDIIHQLVQNIL 288
           +KEELNA+KQEMMQLE+DRGIRNNLLEYLRS DP+MVTE+SRPSS EVEDIIHQLVQNIL
Sbjct: 229 MKEELNAQKQEMMQLEHDRGIRNNLLEYLRSFDPDMVTEMSRPSSEEVEDIIHQLVQNIL 288

Query: 289 SRFFVDDASGSFMEQSVEGNIDNHPDNGDEFSDTVGTSRDYLAKLLFWCMLLGHHLRGLE 348
            RF VD+AS +FMEQSVEGNI    D+GDEFSD + TSRDYLAKLLFWCMLLGHHLRGLE
Sbjct: 289 RRFLVDEASSNFMEQSVEGNI----DDGDEFSDKIATSRDYLAKLLFWCMLLGHHLRGLE 344

Query: 349 NRLQLSCVVGLL 360
           NRL LSCVVGLL
Sbjct: 345 NRLHLSCVVGLL 356


>Medtr4g071610.1 | Hop-interacting protein THI043 | HC |
           chr4:27095155-27100168 | 20130731
          Length = 356

 Score =  446 bits (1148), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 253/372 (68%), Positives = 283/372 (76%), Gaps = 28/372 (7%)

Query: 1   MAA--LSWRPFILSRLTDXXXXXXXXXXXXXX------XXXXXXCFLTSCY-ADGFXXXX 51
           MAA  +S +PFILSR+T+                           F TSC+  DG     
Sbjct: 1   MAASTISSQPFILSRITNNPSHPSLHHPLPSLFFLRRPPHRRPFLFATSCHHVDG----- 55

Query: 52  XXXXXXXXXXTRKSTFDRGFTVIANMLRRIEPLDNSVISKGVSDAARDSMKQTISTMLGL 111
                     TRKSTF+RGFTVI+ MLRRI+PLDNSVISKGVS+A++DSMKQTISTMLGL
Sbjct: 56  -----DDVVSTRKSTFNRGFTVISKMLRRIKPLDNSVISKGVSEASKDSMKQTISTMLGL 110

Query: 112 LPSDHFSVTVTVSKHPLHRLLVSSIITGYTLWNAEYRMSLTRNLDIASPCGARDSDCEKR 171
           LPSDHF VTV+    PLHRLLVSSIITGYTLWNAEYRMSLTRNL+++     + +DCE  
Sbjct: 111 LPSDHFDVTVSFEIQPLHRLLVSSIITGYTLWNAEYRMSLTRNLEMSH--ADQGADCETP 168

Query: 172 SEILEVKGGGEDGGEI-EVASDLGLKDLENCSSS--PRVFGDLPPQALNYIQQLQSELTN 228
            E LE+KGG E+ GE  +V SDLGL + E CSSS    VFGDLPPQAL YIQQLQSELTN
Sbjct: 169 LESLELKGGEEEHGETEKVVSDLGLANSEICSSSTGAGVFGDLPPQALKYIQQLQSELTN 228

Query: 229 VKEELNARKQEMMQLEYDRGIRNNLLEYLRSLDPEMVTELSRPSSVEVEDIIHQLVQNIL 288
           +KEELNA+KQEMMQLE+DRGIRNNLLEYLRS DP+MVTE+SRPSS EVEDIIHQLVQNIL
Sbjct: 229 MKEELNAQKQEMMQLEHDRGIRNNLLEYLRSFDPDMVTEMSRPSSEEVEDIIHQLVQNIL 288

Query: 289 SRFFVDDASGSFMEQSVEGNIDNHPDNGDEFSDTVGTSRDYLAKLLFWCMLLGHHLRGLE 348
            RF VD+AS +FMEQSVEGNI    D+GDEFSD + TSRDYLAKLLFWCMLLGHHLRGLE
Sbjct: 289 RRFLVDEASSNFMEQSVEGNI----DDGDEFSDKIATSRDYLAKLLFWCMLLGHHLRGLE 344

Query: 349 NRLQLSCVVGLL 360
           NRL LSCVVGLL
Sbjct: 345 NRLHLSCVVGLL 356


>Medtr3g115240.1 | DUF760 family protein | HC |
           chr3:53877908-53882290 | 20130731
          Length = 333

 Score = 79.3 bits (194), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 130/287 (45%), Gaps = 50/287 (17%)

Query: 73  VIANMLRRIEPLDNSVISKGVSDAARDSMKQTISTMLGLLPSDHFSVTVTVSKHPLHRLL 132
           ++   ++ ++P    +  K       D+M+QT++ M+G LP   FS+T+      L +L+
Sbjct: 82  ILLEYVKTVQPEFMELFVKRAPPPVVDAMRQTVTNMIGTLPPQFFSITIATVAENLAQLM 141

Query: 133 VSSIITGYTLWNAEYRMSLTRNLD-IASPCGARDSDCEKRSEILEVKGGGEDGGEIEVAS 191
            S ++TGY   NA+YR+ L  +L+ +A P      D + + +I +   G +     EV  
Sbjct: 142 YSVMMTGYMFRNAQYRLELQESLEQVALP------DVQDKKDIPDYAPGTQKNVSGEVIR 195

Query: 192 DLGLKDLENCSSSPRVFGDLPPQALNYIQQLQSELTNVKEELNARKQEMMQLEYDRGIRN 251
                   N S   R+       A  YI+ L++E+  +  ++  +             +N
Sbjct: 196 ------WNNISGPERM------DAKKYIEILEAEIEELNRQVGRQSS---------NAQN 234

Query: 252 NLLEYLRSLDPEMVTELSRPSSVEVEDIIHQLVQNILSRFFVDDASGSFMEQSVEGNIDN 311
            LLEYL+SL+P  + +L   +S   ED++  L  N   +  +  A  + M+ SV      
Sbjct: 235 ELLEYLKSLEPRNLKDL---TSSAGEDVV--LAMNTFIKRLLAVADPTQMKTSV------ 283

Query: 312 HPDNGDEFSDTVGTSRDYLAKLLFWCMLLGHHLRGLENRLQLSCVVG 358
                        TS   L KLL+W M++G+ +R +E R  +  V+G
Sbjct: 284 -----------TETSASELGKLLYWLMVVGYSIRNIEVRYDMERVLG 319