Miyakogusa Predicted Gene

Lj2g3v1022310.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1022310.1 tr|G7JJU6|G7JJU6_MEDTR Sensor protein rcsC
OS=Medicago truncatula GN=MTR_4g071650 PE=4 SV=1,39.6,0.00000005,no
description,NULL; CheY-like,CheY-like superfamily,gene.g40564.t1.1
         (103 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g008860.1 | response regulator receiver domain protein | L...    62   1e-10
Medtr4g071650.1 | response regulator receiver domain protein | L...    62   1e-10

>Medtr6g008860.1 | response regulator receiver domain protein | LC
          | chr6:2475295-2476305 | 20130731
          Length = 151

 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 6/101 (5%)

Query: 1  MNSNITGFKRQRNSEDESLPLGKRQLDGIPC-MKVLLVDGETASRVWMQGMLASLGIETV 59
          M+   TG+KRQ+  E++ + + KR+    P  M  LLVDG TA+R     ML S+GI+T 
Sbjct: 1  MDGGTTGYKRQKKPEEKKMWIKKRESYDTPYPMNALLVDGVTATRRLEHHMLESIGIQTE 60

Query: 60 PVYSAQHAIIELETHDHRGHFDFMFIDW--SIKNALEVISE 98
          P  SAQ A+  L T      FDF+F+D+   I N  E++ +
Sbjct: 61 PANSAQEAMQILLTGV---KFDFIFVDFDLPIINGPELVRQ 98


>Medtr4g071650.1 | response regulator receiver domain protein | LC
          | chr4:27114427-27113416 | 20130731
          Length = 151

 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 6/101 (5%)

Query: 1  MNSNITGFKRQRNSEDESLPLGKRQLDGIPC-MKVLLVDGETASRVWMQGMLASLGIETV 59
          M+   TG+KRQ+  E++ + + KR+    P  M  LLVDG TA+R     ML S+GI+T 
Sbjct: 1  MDGGTTGYKRQKKPEEKKMWIKKRESYDTPYPMNALLVDGVTATRRLEHHMLESIGIQTE 60

Query: 60 PVYSAQHAIIELETHDHRGHFDFMFIDW--SIKNALEVISE 98
          P  SAQ A+  L T      FDF+F+D+   I N  E++ +
Sbjct: 61 PANSAQEAMQILLTGV---KFDFIFVDFDLPIINGPELVRQ 98