Miyakogusa Predicted Gene

Lj2g3v1020070.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1020070.1 Non Characterized Hit- tr|I3S4G0|I3S4G0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.31,0,Ferredoxin thioredoxin reductase (FTR), catalytic beta
chain,Ferredoxin thioredoxin reductase beta s,CUFF.35949.1
         (144 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g008220.1 | ferredoxin-thioredoxin reductase catalytic cha...   260   4e-70
Medtr6g008220.2 | ferredoxin-thioredoxin reductase catalytic cha...   204   2e-53

>Medtr6g008220.1 | ferredoxin-thioredoxin reductase catalytic chain
           | HC | chr6:2235175-2229604 | 20130731
          Length = 144

 Score =  260 bits (664), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 120/144 (83%), Positives = 130/144 (90%)

Query: 1   MTSQACSFAVTVPSVASPLRRHRNLHVVRAQVEPSEKSIEIMRKFSEQYARKSGTYFCVD 60
           MTSQA +FAV+V S  SPLRR R   VVRAQ+EPS+KS+EIMRKFSEQYARKSGT+FC D
Sbjct: 1   MTSQASTFAVSVSSAPSPLRRRRTFPVVRAQLEPSDKSVEIMRKFSEQYARKSGTFFCSD 60

Query: 61  KSVTSVVIKGLADHKDSLGAPLCPCRHYDDKPAEAQQGFWNCPCVPMRERKECHCMLFLT 120
           K VT+VVIKGLADHKDSLGAPLCPCRHYDDK AEA QGFWNCPCVPMRERKECHCMLFLT
Sbjct: 61  KGVTAVVIKGLADHKDSLGAPLCPCRHYDDKAAEAAQGFWNCPCVPMRERKECHCMLFLT 120

Query: 121 PENDFAGKEQAITLDEIRETTANM 144
           P+NDFAG EQ ITLDEI+E+TANM
Sbjct: 121 PDNDFAGDEQTITLDEIKESTANM 144


>Medtr6g008220.2 | ferredoxin-thioredoxin reductase catalytic chain
           | HC | chr6:2235175-2229604 | 20130731
          Length = 103

 Score =  204 bits (520), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 92/103 (89%), Positives = 97/103 (94%)

Query: 42  MRKFSEQYARKSGTYFCVDKSVTSVVIKGLADHKDSLGAPLCPCRHYDDKPAEAQQGFWN 101
           MRKFSEQYARKSGT+FC DK VT+VVIKGLADHKDSLGAPLCPCRHYDDK AEA QGFWN
Sbjct: 1   MRKFSEQYARKSGTFFCSDKGVTAVVIKGLADHKDSLGAPLCPCRHYDDKAAEAAQGFWN 60

Query: 102 CPCVPMRERKECHCMLFLTPENDFAGKEQAITLDEIRETTANM 144
           CPCVPMRERKECHCMLFLTP+NDFAG EQ ITLDEI+E+TANM
Sbjct: 61  CPCVPMRERKECHCMLFLTPDNDFAGDEQTITLDEIKESTANM 103