Miyakogusa Predicted Gene

Lj2g3v1019950.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1019950.1 tr|G7JNV6|G7JNV6_MEDTR Gonadotropin beta chain
OS=Medicago truncatula GN=MTR_4g106860 PE=4
SV=1,73.77,7e-19,GASA,Gibberellin regulated protein;
seg,NULL,CUFF.35951.1
         (298 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g007897.1 | gibberellin-regulated family protein | HC | ch...   140   1e-33
Medtr6g007913.1 | GASA/GAST/Snakin | HC | chr6:2139621-2140861 |...   115   5e-26
Medtr6g007917.1 | GASA/GAST/Snakin | HC | chr6:2144954-2147100 |...   112   5e-25
Medtr0254s0070.1 | gibberellin-regulated family protein | LC | s...   109   4e-24
Medtr8g062800.1 | gibberellin-regulated family protein | HC | ch...   101   9e-22
Medtr4g106860.1 | gibberellin-regulated family protein | HC | ch...    98   9e-21
Medtr1g025220.1 | GASA/GAST/Snakin | HC | chr1:8036000-8034809 |...    78   1e-14
Medtr3g113890.1 | gibberellin-regulated family protein | HC | ch...    76   4e-14
Medtr1g096370.1 | Thionin related | HC | chr1:43398389-43400025 ...    74   1e-13
Medtr1g025250.1 | GASA/GAST/Snakin | HC | chr1:8043284-8042165 |...    73   4e-13
Medtr8g075920.1 | gibberellin-regulated family protein | HC | ch...    65   9e-11
Medtr5g095990.1 | GASA/GAST/Snakin | HC | chr5:41969296-41967991...    56   5e-08
Medtr3g007900.1 | GASA/GAST/Snakin | HC | chr3:1236356-1234999 |...    55   8e-08
Medtr5g036860.1 | Thionin related | HC | chr5:16094808-16095353 ...    55   1e-07
Medtr3g102660.1 | GASA/GAST/Snakin | HC | chr3:47312866-47311376...    54   2e-07
Medtr5g036640.1 | GASA/GAST/Snakin | HC | chr5:16006505-16005811...    54   2e-07
Medtr3g113850.1 | gibberellin-regulated family protein | HC | ch...    53   3e-07
Medtr1g106915.1 | gibberellin-regulated family protein | HC | ch...    53   4e-07
Medtr5g036880.1 | Thionin related | HC | chr5:16099765-16100343 ...    52   5e-07
Medtr5g036720.1 | Thionin related | HC | chr5:16046544-16047137 ...    52   6e-07
Medtr7g090590.1 | GASA/GAST/Snakin | HC | chr7:35650637-35649513...    50   3e-06

>Medtr6g007897.1 | gibberellin-regulated family protein | HC |
           chr6:2123510-2126214 | 20130731
          Length = 248

 Score =  140 bits (354), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 58/67 (86%), Positives = 61/67 (91%)

Query: 232 IVKSMKDCIPLCNYRCQLHSRKNMCTRACMTCCDRCKCVPPGTYGNREKCGKCYTDMLTH 291
           IVKS KDCIPLC YRCQ HSR+N C RACMTCCDRCKCVPPGTYGNREKCGKCYTDM+TH
Sbjct: 182 IVKSWKDCIPLCGYRCQKHSRQNTCIRACMTCCDRCKCVPPGTYGNREKCGKCYTDMVTH 241

Query: 292 GNKYKCP 298
           GN+ KCP
Sbjct: 242 GNRPKCP 248



 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 23/33 (69%), Positives = 29/33 (87%)

Query: 67 EMAFKAILLLSIFLVVSTKVFSHDEDLKIVVNY 99
          +M  K+I LL IFLV++TKV+S+DEDLKIVVNY
Sbjct: 4  KMVSKSIFLLGIFLVLATKVYSYDEDLKIVVNY 36


>Medtr6g007913.1 | GASA/GAST/Snakin | HC | chr6:2139621-2140861 |
           20130731
          Length = 138

 Score =  115 bits (288), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 55/70 (78%), Positives = 59/70 (84%), Gaps = 1/70 (1%)

Query: 230 TPIVKSMKDCIPLCNYRCQLHSRKNMCTRACMTCCDRCKCVP-PGTYGNREKCGKCYTDM 288
           TPIVKS KDCIPLC YRC+LH RK +C  ACMTCCDRCKCVP   TYGNR+KCGKCYTDM
Sbjct: 69  TPIVKSWKDCIPLCIYRCKLHLRKMVCITACMTCCDRCKCVPLDQTYGNRDKCGKCYTDM 128

Query: 289 LTHGNKYKCP 298
           LTH +K KCP
Sbjct: 129 LTHHDKVKCP 138


>Medtr6g007917.1 | GASA/GAST/Snakin | HC | chr6:2144954-2147100 |
           20130731
          Length = 158

 Score =  112 bits (280), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 49/70 (70%), Positives = 56/70 (80%)

Query: 229 STPIVKSMKDCIPLCNYRCQLHSRKNMCTRACMTCCDRCKCVPPGTYGNREKCGKCYTDM 288
           +TP+VKS +DCIPLC  RC+LH RK  C   CMTCCDRC+CVPPGTYGNREKCGKCYTDM
Sbjct: 89  ATPVVKSWEDCIPLCYVRCKLHLRKVECMTQCMTCCDRCQCVPPGTYGNREKCGKCYTDM 148

Query: 289 LTHGNKYKCP 298
            T  ++  CP
Sbjct: 149 RTFLDEIMCP 158


>Medtr0254s0070.1 | gibberellin-regulated family protein | LC |
           scaffold0254:22256-23564 | 20130731
          Length = 164

 Score =  109 bits (272), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 50/71 (70%), Positives = 57/71 (80%), Gaps = 1/71 (1%)

Query: 229 STPIVKSMKDCIPLCNYRCQLHSRKNMCTRACMTCCDRCKCVP-PGTYGNREKCGKCYTD 287
           +TP+VKS +DCIPLC YRC+LH RK +C  ACMTCCDRCKCVP   TYGNREKCGKCYTD
Sbjct: 94  ATPVVKSWEDCIPLCGYRCKLHLRKMVCITACMTCCDRCKCVPLDQTYGNREKCGKCYTD 153

Query: 288 MLTHGNKYKCP 298
           M T  ++  CP
Sbjct: 154 MRTFLDEIMCP 164


>Medtr8g062800.1 | gibberellin-regulated family protein | HC |
           chr8:26266919-26268062 | 20130731
          Length = 112

 Score =  101 bits (251), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 45/61 (73%), Positives = 49/61 (80%)

Query: 238 DCIPLCNYRCQLHSRKNMCTRACMTCCDRCKCVPPGTYGNREKCGKCYTDMLTHGNKYKC 297
           DC   CN RC +HSR N+C RAC TCC RCKCVPPGTYGNRE CG+CYTDM+T GNK KC
Sbjct: 52  DCGTRCNVRCSVHSRPNVCMRACGTCCLRCKCVPPGTYGNREMCGRCYTDMITRGNKPKC 111

Query: 298 P 298
           P
Sbjct: 112 P 112


>Medtr4g106860.1 | gibberellin-regulated family protein | HC |
           chr4:44105867-44104817 | 20130731
          Length = 115

 Score = 98.2 bits (243), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 45/61 (73%), Positives = 47/61 (77%)

Query: 238 DCIPLCNYRCQLHSRKNMCTRACMTCCDRCKCVPPGTYGNREKCGKCYTDMLTHGNKYKC 297
           DC  LC  RC +HSR N+C RAC TCC RCKCVPPGT GNRE CG CYTDM THGNK KC
Sbjct: 55  DCGGLCRSRCSVHSRPNLCKRACGTCCVRCKCVPPGTAGNREFCGACYTDMTTHGNKTKC 114

Query: 298 P 298
           P
Sbjct: 115 P 115


>Medtr1g025220.1 | GASA/GAST/Snakin | HC | chr1:8036000-8034809 |
           20130731
          Length = 101

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 37/61 (60%), Positives = 40/61 (65%), Gaps = 1/61 (1%)

Query: 238 DCIPLCNYRCQLHSRKNMCTRACMTCCDRCKCVPPGTYGNREKCGKCYTDMLTHGNKYKC 297
           DC   C  RC+L SR N+C RAC TCC RC CVPPGT GN+EKC  CY    T G K KC
Sbjct: 42  DCDGACVARCRLSSRPNLCQRACGTCCRRCNCVPPGTSGNKEKC-PCYASQTTRGGKPKC 100

Query: 298 P 298
           P
Sbjct: 101 P 101


>Medtr3g113890.1 | gibberellin-regulated family protein | HC |
           chr3:53117270-53116018 | 20130731
          Length = 103

 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 35/61 (57%), Positives = 41/61 (67%), Gaps = 1/61 (1%)

Query: 238 DCIPLCNYRCQLHSRKNMCTRACMTCCDRCKCVPPGTYGNREKCGKCYTDMLTHGNKYKC 297
           DC   C  RC+L SR ++C RAC TCC RC CVPPGT GN+E C  CY +  THG + KC
Sbjct: 44  DCNGACAARCRLSSRPHLCHRACGTCCSRCNCVPPGTSGNQEMC-PCYANQTTHGGRRKC 102

Query: 298 P 298
           P
Sbjct: 103 P 103


>Medtr1g096370.1 | Thionin related | HC | chr1:43398389-43400025 |
           20130731
          Length = 95

 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 42/67 (62%), Gaps = 1/67 (1%)

Query: 232 IVKSMKDCIPLCNYRCQLHSRKNMCTRACMTCCDRCKCVPPGTYGNREKCGKCYTDMLTH 291
           IV +  DC   C YRC   SR+ +C RAC +CC +C CVPPGT GN + C  CY  + TH
Sbjct: 30  IVAAQIDCNGKCGYRCSKASRQKICMRACTSCCRKCNCVPPGTSGNSDMC-PCYASLKTH 88

Query: 292 GNKYKCP 298
           G K KCP
Sbjct: 89  GGKLKCP 95


>Medtr1g025250.1 | GASA/GAST/Snakin | HC | chr1:8043284-8042165 |
           20130731
          Length = 100

 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 36/61 (59%), Positives = 39/61 (63%), Gaps = 1/61 (1%)

Query: 238 DCIPLCNYRCQLHSRKNMCTRACMTCCDRCKCVPPGTYGNREKCGKCYTDMLTHGNKYKC 297
           DC   C  RC+L SR  +C RAC TCC RC CVPPGT GN+EKC  CY    T G K KC
Sbjct: 41  DCNGACVARCRLSSRPKLCHRACGTCCRRCNCVPPGTAGNQEKC-PCYASQTTRGGKPKC 99

Query: 298 P 298
           P
Sbjct: 100 P 100


>Medtr8g075920.1 | gibberellin-regulated family protein | HC |
           chr8:32110372-32113123 | 20130731
          Length = 103

 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 32/61 (52%), Positives = 37/61 (60%), Gaps = 1/61 (1%)

Query: 238 DCIPLCNYRCQLHSRKNMCTRACMTCCDRCKCVPPGTYGNREKCGKCYTDMLTHGNKYKC 297
           DC   C  RC L SR N+C RAC +CC  CKCVPPGT GN + C +CY  + T     KC
Sbjct: 44  DCGDACKGRCLLSSRPNLCKRACGSCCAVCKCVPPGTAGNFDSC-ECYAKLTTRNQVRKC 102

Query: 298 P 298
           P
Sbjct: 103 P 103


>Medtr5g095990.1 | GASA/GAST/Snakin | HC | chr5:41969296-41967991 |
           20130731
          Length = 149

 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 237 KDCIPLCNYRCQLHSRKNMCTRACMTCCDRCKCVPPGTYGNREKCGKCYTDMLTHGNKYK 296
           ++C P C  RC     K  C   C  CC +C CVPPGTYGN+E C  CY D  T     K
Sbjct: 89  EECAPRCEDRCSKTHHKKPCLFYCKYCCAKCLCVPPGTYGNKEVC-PCYNDWKTKEGGPK 147

Query: 297 CP 298
           CP
Sbjct: 148 CP 149


>Medtr3g007900.1 | GASA/GAST/Snakin | HC | chr3:1236356-1234999 |
           20130731
          Length = 154

 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 237 KDCIPLCNYRCQLHSRKNMCTRACMTCCDRCKCVPPGTYGNREKCGKCYTDMLTHGNKYK 296
           ++C P C  RC     +  C   C  CC +C CVPPGTYGN+E C  CY D  T     K
Sbjct: 94  EECAPRCEDRCSKTHHRKPCLFYCKYCCAKCLCVPPGTYGNKEVC-PCYNDWKTKEGGPK 152

Query: 297 CP 298
           CP
Sbjct: 153 CP 154


>Medtr5g036860.1 | Thionin related | HC | chr5:16094808-16095353 |
           20130731
          Length = 92

 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 34/61 (55%), Gaps = 1/61 (1%)

Query: 238 DCIPLCNYRCQLHSRKNMCTRACMTCCDRCKCVPPGTYGNREKCGKCYTDMLTHGNKYKC 297
           +C P C+YRC   + K  C   C  CC +C CVP GTYGN+E+C  CY +        KC
Sbjct: 33  ECAPKCDYRCSKTAYKKACLTYCNLCCAKCLCVPSGTYGNKEEC-PCYNNWKNKKGGPKC 91

Query: 298 P 298
           P
Sbjct: 92  P 92


>Medtr3g102660.1 | GASA/GAST/Snakin | HC | chr3:47312866-47311376 |
           20130731
          Length = 85

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 1/60 (1%)

Query: 239 CIPLCNYRCQLHSRKNMCTRACMTCCDRCKCVPPGTYGNREKCGKCYTDMLTHGNKYKCP 298
           C   C  RC   S ++ C + C  CC++C CVP GTYGN+++C  CY DM     K KCP
Sbjct: 27  CNSKCAVRCSKASIQDRCLKFCGICCEKCNCVPSGTYGNKDEC-PCYRDMKNSKGKGKCP 85


>Medtr5g036640.1 | GASA/GAST/Snakin | HC | chr5:16006505-16005811 |
           20130731
          Length = 83

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 1/67 (1%)

Query: 232 IVKSMKDCIPLCNYRCQLHSRKNMCTRACMTCCDRCKCVPPGTYGNREKCGKCYTDMLTH 291
           I ++  +C P C+YRC   S +  C   C  CC +C CVP GTYGN+++C  CY +    
Sbjct: 18  IQETYVNCAPKCDYRCSKTSHRKACLTYCNLCCAKCLCVPSGTYGNKQEC-PCYDNWRNK 76

Query: 292 GNKYKCP 298
               KCP
Sbjct: 77  NGGPKCP 83


>Medtr3g113850.1 | gibberellin-regulated family protein | HC |
           chr3:53105270-53103170 | 20130731
          Length = 452

 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/45 (53%), Positives = 29/45 (64%)

Query: 237 KDCIPLCNYRCQLHSRKNMCTRACMTCCDRCKCVPPGTYGNREKC 281
           ++C   C  RC L SR+ +  RAC TCC RC CVP GT GN+E C
Sbjct: 405 ENCNGACAARCCLSSRQRLGHRACGTCCSRCNCVPLGTSGNQEMC 449


>Medtr1g106915.1 | gibberellin-regulated family protein | HC |
           chr1:48402045-48402972 | 20130731
          Length = 90

 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 1/61 (1%)

Query: 238 DCIPLCNYRCQLHSRKNMCTRACMTCCDRCKCVPPGTYGNREKCGKCYTDMLTHGNKYKC 297
           +C   C+ RC     ++ C + C  CC+ CKCVP GTYGN+ +C  CY D + +  K KC
Sbjct: 31  NCSSKCSDRCSKAGVQDRCVKYCEICCNECKCVPSGTYGNKHEC-PCYRDKVNNKGKPKC 89

Query: 298 P 298
           P
Sbjct: 90  P 90


>Medtr5g036880.1 | Thionin related | HC | chr5:16099765-16100343 |
           20130731
          Length = 92

 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 1/62 (1%)

Query: 237 KDCIPLCNYRCQLHSRKNMCTRACMTCCDRCKCVPPGTYGNREKCGKCYTDMLTHGNKYK 296
           ++C   C+ RC     K  C   C  CC +C CVP GTYG++E+C  CY ++ TH    K
Sbjct: 32  EECSAACDVRCSATMYKKACLTYCNYCCAKCLCVPSGTYGHKEEC-PCYANLKTHEGGPK 90

Query: 297 CP 298
           CP
Sbjct: 91  CP 92


>Medtr5g036720.1 | Thionin related | HC | chr5:16046544-16047137 |
           20130731
          Length = 92

 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 34/62 (54%), Gaps = 1/62 (1%)

Query: 237 KDCIPLCNYRCQLHSRKNMCTRACMTCCDRCKCVPPGTYGNREKCGKCYTDMLTHGNKYK 296
           +DC   C+ RC     K  C   C  CC +C CVP GTYG++E+C  CY +M T     K
Sbjct: 32  QDCAGACDVRCSATMYKKACLTYCNYCCAKCLCVPSGTYGHKEEC-PCYANMRTKRGGPK 90

Query: 297 CP 298
           CP
Sbjct: 91  CP 92


>Medtr7g090590.1 | GASA/GAST/Snakin | HC | chr7:35650637-35649513 |
           20130731
          Length = 120

 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 237 KDCIPLCNYRCQLHSRKNMCTRACMTCCDRCKCVPPGTYGNREKCGKCYTDMLTHGNKYK 296
           ++C P C  RC     K  C   C  CC +C CVPPG YGN++ C  CY +  T     K
Sbjct: 60  QECGPRCTNRCSNTQYKKPCLFFCNKCCAKCLCVPPGYYGNKQVC-PCYNNWKTKRGGPK 118

Query: 297 CP 298
           CP
Sbjct: 119 CP 120