Miyakogusa Predicted Gene
- Lj2g3v1019910.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1019910.1 Non Characterized Hit- tr|C0PQI9|C0PQI9_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,39.22,7e-19,HMA, heavy metal-associated domain,Heavy
metal-associated domain, HMA; HMA_2,Heavy metal-associated
,CUFF.35938.1
(178 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr6g007887.1 | hypothetical protein | HC | chr6:2113747-21183... 155 2e-38
>Medtr6g007887.1 | hypothetical protein | HC | chr6:2113747-2118356
| 20130731
Length = 195
Score = 155 bits (392), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/149 (59%), Positives = 97/149 (65%), Gaps = 11/149 (7%)
Query: 30 FCTFPLHPRCSPLKAWTVKN--RLFRVAKAXXXXXXXXX------XXXXXXXXXXXXXXX 81
FC FP HPR +KA ++KN R V KA
Sbjct: 33 FCNFPCHPR---MKALSIKNKNRCLSVTKAVEDETQQEQEQVVTDVEQQQQQTSVTSEQP 89
Query: 82 XXXXXISPSDTLTMLFQAEGILNETAVPALTKALEETDGVTNLRVHLFEGLASLELEKQT 141
ISPSDTLTMLFQAEG LNETAVP L KALEET+GV NL+V++FEGLA+LELEKQT
Sbjct: 90 SVVVPISPSDTLTMLFQAEGTLNETAVPPLRKALEETEGVKNLKVNVFEGLATLELEKQT 149
Query: 142 TVQATGVASSLVETIQGLGFKLQTLNLSF 170
T+QATGVASSLVE IQGLGFKLQTLNLSF
Sbjct: 150 TIQATGVASSLVEIIQGLGFKLQTLNLSF 178