Miyakogusa Predicted Gene

Lj2g3v1019910.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1019910.1 Non Characterized Hit- tr|C0PQI9|C0PQI9_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,39.22,7e-19,HMA, heavy metal-associated domain,Heavy
metal-associated domain, HMA; HMA_2,Heavy metal-associated
,CUFF.35938.1
         (178 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g007887.1 | hypothetical protein | HC | chr6:2113747-21183...   155   2e-38

>Medtr6g007887.1 | hypothetical protein | HC | chr6:2113747-2118356
           | 20130731
          Length = 195

 Score =  155 bits (392), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 88/149 (59%), Positives = 97/149 (65%), Gaps = 11/149 (7%)

Query: 30  FCTFPLHPRCSPLKAWTVKN--RLFRVAKAXXXXXXXXX------XXXXXXXXXXXXXXX 81
           FC FP HPR   +KA ++KN  R   V KA                              
Sbjct: 33  FCNFPCHPR---MKALSIKNKNRCLSVTKAVEDETQQEQEQVVTDVEQQQQQTSVTSEQP 89

Query: 82  XXXXXISPSDTLTMLFQAEGILNETAVPALTKALEETDGVTNLRVHLFEGLASLELEKQT 141
                ISPSDTLTMLFQAEG LNETAVP L KALEET+GV NL+V++FEGLA+LELEKQT
Sbjct: 90  SVVVPISPSDTLTMLFQAEGTLNETAVPPLRKALEETEGVKNLKVNVFEGLATLELEKQT 149

Query: 142 TVQATGVASSLVETIQGLGFKLQTLNLSF 170
           T+QATGVASSLVE IQGLGFKLQTLNLSF
Sbjct: 150 TIQATGVASSLVEIIQGLGFKLQTLNLSF 178