Miyakogusa Predicted Gene

Lj2g3v1019760.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1019760.1 Non Characterized Hit- tr|G6BEC7|G6BEC7_CLODI
Putative uncharacterized protein OS=Clostridium
diffic,32.58,0.000000000000002,no description,NULL; seg,NULL;
LigT-like,RNA ligase/cyclic nucleotide phosphodiesterase;
2_5_RNA_lig,CUFF.35931.1
         (182 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g007773.1 | calmodulin-binding protein | HC | chr6:1962324...   201   3e-52

>Medtr6g007773.1 | calmodulin-binding protein | HC |
           chr6:1962324-1961294 | 20130731
          Length = 193

 Score =  201 bits (511), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 114/177 (64%), Positives = 134/177 (75%), Gaps = 2/177 (1%)

Query: 2   GYAIELYMDPALENQVLKAWNVIARRQISTQLIEMESRPHITLFSTP-FLEPSKLEPLLK 60
           GYAIELYMDPALENQVLK+WNV+ARRQIST LI   SRPHITLFST   L+P KLEPLLK
Sbjct: 7   GYAIELYMDPALENQVLKSWNVLARRQISTSLITTASRPHITLFSTTSLLDPLKLEPLLK 66

Query: 61  TLSTKHDPFPLSFSSVGAFPGDHNXXXXXXXXXXXXXHFQSQLCDAIRKEGV-DVPDEYA 119
           TL+T   PFPLSFSS+ +F  D+N             +F S L D+I KE V DV DE+ 
Sbjct: 67  TLTTTTSPFPLSFSSISSFSNDNNTLFLSPTPSLALLNFHSNLIDSILKENVVDVGDEFC 126

Query: 120 LGSWIPFCSVAHQVPKARMAEAFSLLRDLKLPVSGYAVDVAVVQFSPVRELFSFVLG 176
           +G+WIP C VA  V K RM EAFS+LR++KLPV+GYAVDVA+V F+PV+E+FSFVLG
Sbjct: 127 VGNWIPSCEVAKNVSKGRMTEAFSILREIKLPVNGYAVDVALVSFNPVQEVFSFVLG 183