Miyakogusa Predicted Gene
- Lj2g3v1014470.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1014470.1 Non Characterized Hit- tr|D8SU27|D8SU27_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,58.33,5e-19,VMA21,Vacuolar ATPase assembly integral
membrane protein VMA21-like domain,CUFF.35913.1
(104 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr6g017185.6 | VMA21-like domain protein | HC | chr6:6808973-... 184 2e-47
Medtr6g017185.1 | VMA21-like domain protein | HC | chr6:6808973-... 184 2e-47
Medtr6g017185.4 | VMA21-like domain protein | HC | chr6:6808973-... 184 2e-47
Medtr6g017185.7 | VMA21-like domain protein | HC | chr6:6808973-... 184 2e-47
Medtr6g017185.8 | VMA21-like domain protein | HC | chr6:6808973-... 184 2e-47
Medtr6g017185.5 | VMA21-like domain protein | HC | chr6:6810117-... 129 9e-31
Medtr6g017185.3 | VMA21-like domain protein | HC | chr6:6810117-... 129 9e-31
Medtr6g017185.2 | VMA21-like domain protein | HC | chr6:6810117-... 129 9e-31
>Medtr6g017185.6 | VMA21-like domain protein | HC |
chr6:6808973-6810568 | 20130731
Length = 104
Score = 184 bits (467), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 86/104 (82%), Positives = 98/104 (94%)
Query: 1 MRVIQKFFIASMFMWAVPIAILHAFNHNLLPGTSNLSPYSVTLVSGFLAVISVNVVIAFY 60
M V+QKFFIAS+FMWA+PIAIL+AFNH+LLPGTSNLSPYS+TLVSGFLAVISVN+VIAFY
Sbjct: 1 MSVVQKFFIASLFMWAIPIAILYAFNHDLLPGTSNLSPYSMTLVSGFLAVISVNMVIAFY 60
Query: 61 IYLAMREPADKHEPDPRFLAEAKASINQTSGEAQQSSQPSKKEQ 104
IYLAMREPADKHEPDP+FLAEAKASI Q++ + QQSSQ KK+Q
Sbjct: 61 IYLAMREPADKHEPDPKFLAEAKASIKQSTTDDQQSSQSLKKQQ 104
>Medtr6g017185.1 | VMA21-like domain protein | HC |
chr6:6808973-6810568 | 20130731
Length = 104
Score = 184 bits (467), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 86/104 (82%), Positives = 98/104 (94%)
Query: 1 MRVIQKFFIASMFMWAVPIAILHAFNHNLLPGTSNLSPYSVTLVSGFLAVISVNVVIAFY 60
M V+QKFFIAS+FMWA+PIAIL+AFNH+LLPGTSNLSPYS+TLVSGFLAVISVN+VIAFY
Sbjct: 1 MSVVQKFFIASLFMWAIPIAILYAFNHDLLPGTSNLSPYSMTLVSGFLAVISVNMVIAFY 60
Query: 61 IYLAMREPADKHEPDPRFLAEAKASINQTSGEAQQSSQPSKKEQ 104
IYLAMREPADKHEPDP+FLAEAKASI Q++ + QQSSQ KK+Q
Sbjct: 61 IYLAMREPADKHEPDPKFLAEAKASIKQSTTDDQQSSQSLKKQQ 104
>Medtr6g017185.4 | VMA21-like domain protein | HC |
chr6:6808973-6810568 | 20130731
Length = 104
Score = 184 bits (467), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 86/104 (82%), Positives = 98/104 (94%)
Query: 1 MRVIQKFFIASMFMWAVPIAILHAFNHNLLPGTSNLSPYSVTLVSGFLAVISVNVVIAFY 60
M V+QKFFIAS+FMWA+PIAIL+AFNH+LLPGTSNLSPYS+TLVSGFLAVISVN+VIAFY
Sbjct: 1 MSVVQKFFIASLFMWAIPIAILYAFNHDLLPGTSNLSPYSMTLVSGFLAVISVNMVIAFY 60
Query: 61 IYLAMREPADKHEPDPRFLAEAKASINQTSGEAQQSSQPSKKEQ 104
IYLAMREPADKHEPDP+FLAEAKASI Q++ + QQSSQ KK+Q
Sbjct: 61 IYLAMREPADKHEPDPKFLAEAKASIKQSTTDDQQSSQSLKKQQ 104
>Medtr6g017185.7 | VMA21-like domain protein | HC |
chr6:6808973-6810568 | 20130731
Length = 104
Score = 184 bits (467), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 86/104 (82%), Positives = 98/104 (94%)
Query: 1 MRVIQKFFIASMFMWAVPIAILHAFNHNLLPGTSNLSPYSVTLVSGFLAVISVNVVIAFY 60
M V+QKFFIAS+FMWA+PIAIL+AFNH+LLPGTSNLSPYS+TLVSGFLAVISVN+VIAFY
Sbjct: 1 MSVVQKFFIASLFMWAIPIAILYAFNHDLLPGTSNLSPYSMTLVSGFLAVISVNMVIAFY 60
Query: 61 IYLAMREPADKHEPDPRFLAEAKASINQTSGEAQQSSQPSKKEQ 104
IYLAMREPADKHEPDP+FLAEAKASI Q++ + QQSSQ KK+Q
Sbjct: 61 IYLAMREPADKHEPDPKFLAEAKASIKQSTTDDQQSSQSLKKQQ 104
>Medtr6g017185.8 | VMA21-like domain protein | HC |
chr6:6808973-6810568 | 20130731
Length = 104
Score = 184 bits (467), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 86/104 (82%), Positives = 98/104 (94%)
Query: 1 MRVIQKFFIASMFMWAVPIAILHAFNHNLLPGTSNLSPYSVTLVSGFLAVISVNVVIAFY 60
M V+QKFFIAS+FMWA+PIAIL+AFNH+LLPGTSNLSPYS+TLVSGFLAVISVN+VIAFY
Sbjct: 1 MSVVQKFFIASLFMWAIPIAILYAFNHDLLPGTSNLSPYSMTLVSGFLAVISVNMVIAFY 60
Query: 61 IYLAMREPADKHEPDPRFLAEAKASINQTSGEAQQSSQPSKKEQ 104
IYLAMREPADKHEPDP+FLAEAKASI Q++ + QQSSQ KK+Q
Sbjct: 61 IYLAMREPADKHEPDPKFLAEAKASIKQSTTDDQQSSQSLKKQQ 104
>Medtr6g017185.5 | VMA21-like domain protein | HC |
chr6:6810117-6810568 | 20130731
Length = 79
Score = 129 bits (323), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 61/73 (83%), Positives = 68/73 (93%)
Query: 32 GTSNLSPYSVTLVSGFLAVISVNVVIAFYIYLAMREPADKHEPDPRFLAEAKASINQTSG 91
GTSNLSPYS+TLVSGFLAVISVN+VIAFYIYLAMREPADKHEPDP+FLAEAKASI Q++
Sbjct: 7 GTSNLSPYSMTLVSGFLAVISVNMVIAFYIYLAMREPADKHEPDPKFLAEAKASIKQSTT 66
Query: 92 EAQQSSQPSKKEQ 104
+ QQSSQ KK+Q
Sbjct: 67 DDQQSSQSLKKQQ 79
>Medtr6g017185.3 | VMA21-like domain protein | HC |
chr6:6810117-6810568 | 20130731
Length = 79
Score = 129 bits (323), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 61/73 (83%), Positives = 68/73 (93%)
Query: 32 GTSNLSPYSVTLVSGFLAVISVNVVIAFYIYLAMREPADKHEPDPRFLAEAKASINQTSG 91
GTSNLSPYS+TLVSGFLAVISVN+VIAFYIYLAMREPADKHEPDP+FLAEAKASI Q++
Sbjct: 7 GTSNLSPYSMTLVSGFLAVISVNMVIAFYIYLAMREPADKHEPDPKFLAEAKASIKQSTT 66
Query: 92 EAQQSSQPSKKEQ 104
+ QQSSQ KK+Q
Sbjct: 67 DDQQSSQSLKKQQ 79
>Medtr6g017185.2 | VMA21-like domain protein | HC |
chr6:6810117-6810568 | 20130731
Length = 79
Score = 129 bits (323), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 61/73 (83%), Positives = 68/73 (93%)
Query: 32 GTSNLSPYSVTLVSGFLAVISVNVVIAFYIYLAMREPADKHEPDPRFLAEAKASINQTSG 91
GTSNLSPYS+TLVSGFLAVISVN+VIAFYIYLAMREPADKHEPDP+FLAEAKASI Q++
Sbjct: 7 GTSNLSPYSMTLVSGFLAVISVNMVIAFYIYLAMREPADKHEPDPKFLAEAKASIKQSTT 66
Query: 92 EAQQSSQPSKKEQ 104
+ QQSSQ KK+Q
Sbjct: 67 DDQQSSQSLKKQQ 79