Miyakogusa Predicted Gene

Lj2g3v1014470.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1014470.1 Non Characterized Hit- tr|D8SU27|D8SU27_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,58.33,5e-19,VMA21,Vacuolar ATPase assembly integral
membrane protein VMA21-like domain,CUFF.35913.1
         (104 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g017185.6 | VMA21-like domain protein | HC | chr6:6808973-...   184   2e-47
Medtr6g017185.1 | VMA21-like domain protein | HC | chr6:6808973-...   184   2e-47
Medtr6g017185.4 | VMA21-like domain protein | HC | chr6:6808973-...   184   2e-47
Medtr6g017185.7 | VMA21-like domain protein | HC | chr6:6808973-...   184   2e-47
Medtr6g017185.8 | VMA21-like domain protein | HC | chr6:6808973-...   184   2e-47
Medtr6g017185.5 | VMA21-like domain protein | HC | chr6:6810117-...   129   9e-31
Medtr6g017185.3 | VMA21-like domain protein | HC | chr6:6810117-...   129   9e-31
Medtr6g017185.2 | VMA21-like domain protein | HC | chr6:6810117-...   129   9e-31

>Medtr6g017185.6 | VMA21-like domain protein | HC |
           chr6:6808973-6810568 | 20130731
          Length = 104

 Score =  184 bits (467), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 86/104 (82%), Positives = 98/104 (94%)

Query: 1   MRVIQKFFIASMFMWAVPIAILHAFNHNLLPGTSNLSPYSVTLVSGFLAVISVNVVIAFY 60
           M V+QKFFIAS+FMWA+PIAIL+AFNH+LLPGTSNLSPYS+TLVSGFLAVISVN+VIAFY
Sbjct: 1   MSVVQKFFIASLFMWAIPIAILYAFNHDLLPGTSNLSPYSMTLVSGFLAVISVNMVIAFY 60

Query: 61  IYLAMREPADKHEPDPRFLAEAKASINQTSGEAQQSSQPSKKEQ 104
           IYLAMREPADKHEPDP+FLAEAKASI Q++ + QQSSQ  KK+Q
Sbjct: 61  IYLAMREPADKHEPDPKFLAEAKASIKQSTTDDQQSSQSLKKQQ 104


>Medtr6g017185.1 | VMA21-like domain protein | HC |
           chr6:6808973-6810568 | 20130731
          Length = 104

 Score =  184 bits (467), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 86/104 (82%), Positives = 98/104 (94%)

Query: 1   MRVIQKFFIASMFMWAVPIAILHAFNHNLLPGTSNLSPYSVTLVSGFLAVISVNVVIAFY 60
           M V+QKFFIAS+FMWA+PIAIL+AFNH+LLPGTSNLSPYS+TLVSGFLAVISVN+VIAFY
Sbjct: 1   MSVVQKFFIASLFMWAIPIAILYAFNHDLLPGTSNLSPYSMTLVSGFLAVISVNMVIAFY 60

Query: 61  IYLAMREPADKHEPDPRFLAEAKASINQTSGEAQQSSQPSKKEQ 104
           IYLAMREPADKHEPDP+FLAEAKASI Q++ + QQSSQ  KK+Q
Sbjct: 61  IYLAMREPADKHEPDPKFLAEAKASIKQSTTDDQQSSQSLKKQQ 104


>Medtr6g017185.4 | VMA21-like domain protein | HC |
           chr6:6808973-6810568 | 20130731
          Length = 104

 Score =  184 bits (467), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 86/104 (82%), Positives = 98/104 (94%)

Query: 1   MRVIQKFFIASMFMWAVPIAILHAFNHNLLPGTSNLSPYSVTLVSGFLAVISVNVVIAFY 60
           M V+QKFFIAS+FMWA+PIAIL+AFNH+LLPGTSNLSPYS+TLVSGFLAVISVN+VIAFY
Sbjct: 1   MSVVQKFFIASLFMWAIPIAILYAFNHDLLPGTSNLSPYSMTLVSGFLAVISVNMVIAFY 60

Query: 61  IYLAMREPADKHEPDPRFLAEAKASINQTSGEAQQSSQPSKKEQ 104
           IYLAMREPADKHEPDP+FLAEAKASI Q++ + QQSSQ  KK+Q
Sbjct: 61  IYLAMREPADKHEPDPKFLAEAKASIKQSTTDDQQSSQSLKKQQ 104


>Medtr6g017185.7 | VMA21-like domain protein | HC |
           chr6:6808973-6810568 | 20130731
          Length = 104

 Score =  184 bits (467), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 86/104 (82%), Positives = 98/104 (94%)

Query: 1   MRVIQKFFIASMFMWAVPIAILHAFNHNLLPGTSNLSPYSVTLVSGFLAVISVNVVIAFY 60
           M V+QKFFIAS+FMWA+PIAIL+AFNH+LLPGTSNLSPYS+TLVSGFLAVISVN+VIAFY
Sbjct: 1   MSVVQKFFIASLFMWAIPIAILYAFNHDLLPGTSNLSPYSMTLVSGFLAVISVNMVIAFY 60

Query: 61  IYLAMREPADKHEPDPRFLAEAKASINQTSGEAQQSSQPSKKEQ 104
           IYLAMREPADKHEPDP+FLAEAKASI Q++ + QQSSQ  KK+Q
Sbjct: 61  IYLAMREPADKHEPDPKFLAEAKASIKQSTTDDQQSSQSLKKQQ 104


>Medtr6g017185.8 | VMA21-like domain protein | HC |
           chr6:6808973-6810568 | 20130731
          Length = 104

 Score =  184 bits (467), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 86/104 (82%), Positives = 98/104 (94%)

Query: 1   MRVIQKFFIASMFMWAVPIAILHAFNHNLLPGTSNLSPYSVTLVSGFLAVISVNVVIAFY 60
           M V+QKFFIAS+FMWA+PIAIL+AFNH+LLPGTSNLSPYS+TLVSGFLAVISVN+VIAFY
Sbjct: 1   MSVVQKFFIASLFMWAIPIAILYAFNHDLLPGTSNLSPYSMTLVSGFLAVISVNMVIAFY 60

Query: 61  IYLAMREPADKHEPDPRFLAEAKASINQTSGEAQQSSQPSKKEQ 104
           IYLAMREPADKHEPDP+FLAEAKASI Q++ + QQSSQ  KK+Q
Sbjct: 61  IYLAMREPADKHEPDPKFLAEAKASIKQSTTDDQQSSQSLKKQQ 104


>Medtr6g017185.5 | VMA21-like domain protein | HC |
           chr6:6810117-6810568 | 20130731
          Length = 79

 Score =  129 bits (323), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 61/73 (83%), Positives = 68/73 (93%)

Query: 32  GTSNLSPYSVTLVSGFLAVISVNVVIAFYIYLAMREPADKHEPDPRFLAEAKASINQTSG 91
           GTSNLSPYS+TLVSGFLAVISVN+VIAFYIYLAMREPADKHEPDP+FLAEAKASI Q++ 
Sbjct: 7   GTSNLSPYSMTLVSGFLAVISVNMVIAFYIYLAMREPADKHEPDPKFLAEAKASIKQSTT 66

Query: 92  EAQQSSQPSKKEQ 104
           + QQSSQ  KK+Q
Sbjct: 67  DDQQSSQSLKKQQ 79


>Medtr6g017185.3 | VMA21-like domain protein | HC |
           chr6:6810117-6810568 | 20130731
          Length = 79

 Score =  129 bits (323), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 61/73 (83%), Positives = 68/73 (93%)

Query: 32  GTSNLSPYSVTLVSGFLAVISVNVVIAFYIYLAMREPADKHEPDPRFLAEAKASINQTSG 91
           GTSNLSPYS+TLVSGFLAVISVN+VIAFYIYLAMREPADKHEPDP+FLAEAKASI Q++ 
Sbjct: 7   GTSNLSPYSMTLVSGFLAVISVNMVIAFYIYLAMREPADKHEPDPKFLAEAKASIKQSTT 66

Query: 92  EAQQSSQPSKKEQ 104
           + QQSSQ  KK+Q
Sbjct: 67  DDQQSSQSLKKQQ 79


>Medtr6g017185.2 | VMA21-like domain protein | HC |
           chr6:6810117-6810568 | 20130731
          Length = 79

 Score =  129 bits (323), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 61/73 (83%), Positives = 68/73 (93%)

Query: 32  GTSNLSPYSVTLVSGFLAVISVNVVIAFYIYLAMREPADKHEPDPRFLAEAKASINQTSG 91
           GTSNLSPYS+TLVSGFLAVISVN+VIAFYIYLAMREPADKHEPDP+FLAEAKASI Q++ 
Sbjct: 7   GTSNLSPYSMTLVSGFLAVISVNMVIAFYIYLAMREPADKHEPDPKFLAEAKASIKQSTT 66

Query: 92  EAQQSSQPSKKEQ 104
           + QQSSQ  KK+Q
Sbjct: 67  DDQQSSQSLKKQQ 79