Miyakogusa Predicted Gene

Lj2g3v1014200.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1014200.1 Non Characterized Hit- tr|E1ZB57|E1ZB57_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,38.46,3e-16,seg,NULL,CUFF.35888.1
         (287 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g007180.1 | calcium homeostasis regulator CHoR1, putative ...   373   e-104

>Medtr6g007180.1 | calcium homeostasis regulator CHoR1, putative |
           HC | chr6:1501037-1497205 | 20130731
          Length = 300

 Score =  373 bits (958), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 180/253 (71%), Positives = 211/253 (83%), Gaps = 6/253 (2%)

Query: 40  QRSATASRAAAHFTIRAYMEKPNSFASFANKVIGALPVVGLLARIMADEGGVGDDLVDFA 99
           Q     S+   +FTI+AYME PNSF++  +KVIGALPVVGLLARIM+DEGGVG+DL+DFA
Sbjct: 49  QTKQQTSKPTTNFTIKAYMENPNSFSNVVSKVIGALPVVGLLARIMSDEGGVGNDLIDFA 108

Query: 100 EFRRRVGKKCSIADSKAFYQFQKRRGKEGE----PLYVLLCCWLAAIGAGLLKTEEILEG 155
           EFRRRVGK C+  DS AFYQFQ RRG+ G+    P++VLLCCWLAAIGAGLLKTEEILEG
Sbjct: 109 EFRRRVGKNCTATDSTAFYQFQARRGRAGDQAGDPIFVLLCCWLAAIGAGLLKTEEILEG 168

Query: 156 AARLRVSDDIEFEEQTFIALMNEARERRAKLKTAPPALPMEIRVQKALDAIYVCSFWKDP 215
             RLR+S+DIEFEEQTFIA+M+EARERRA+ K APPA+PME+RV+KALDAIYVC F KDP
Sbjct: 169 VGRLRISNDIEFEEQTFIAMMDEARERRARQKGAPPAVPMEVRVEKALDAIYVCCFGKDP 228

Query: 216 VEQEDELLLTTMLSTVFPSVQGQEIERLVKEKAEKVAAGVIDYDVPDFKLP-SKEAVELQ 274
           +E EDE LL+T+LS+VFPSVQ QEI R+VKE AEKV  G +DY +PD   P SKEAVE+Q
Sbjct: 229 IEAEDERLLSTILSSVFPSVQKQEIRRMVKEMAEKVEDGGMDY-IPDAAKPLSKEAVEMQ 287

Query: 275 MKDLQFLRQNSET 287
           MKDL FL+QNS T
Sbjct: 288 MKDLNFLKQNSNT 300