Miyakogusa Predicted Gene

Lj2g3v1014120.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1014120.1 Non Characterized Hit- tr|A5AM50|A5AM50_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,37.57,2e-17,DUF588,Uncharacterised protein family UPF0497,
trans-membrane plant; seg,NULL,CUFF.35883.1
         (238 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g007160.1 | transmembrane protein, putative | HC | chr6:14...   160   1e-39
Medtr7g034390.1 | transmembrane protein, putative | HC | chr7:12...   120   1e-27
Medtr7g034390.2 | transmembrane protein, putative | HC | chr7:12...   119   2e-27
Medtr4g106940.1 | CASP ARALYDRAFT-like protein | HC | chr4:43951...    97   2e-20
Medtr3g078010.1 | CASP ARALYDRAFT-like protein | HC | chr3:35146...    96   4e-20

>Medtr6g007160.1 | transmembrane protein, putative | HC |
           chr6:1477503-1475465 | 20130731
          Length = 234

 Score =  160 bits (404), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 82/182 (45%), Positives = 112/182 (61%), Gaps = 2/182 (1%)

Query: 58  VSGFLMSKKEEKWCRALLGVRVSAFVLCLISFTVMAADKVEGVVIESM-DLFGNFFSTEE 116
           ++ FL SKKE KW  ALL +RV AFV CLI+F+V+ A +   +V E++ + + + F+ + 
Sbjct: 52  ITNFLKSKKEVKWYVALLVIRVFAFVFCLIAFSVLGASEQRVLVSENLTNWYSSGFTIQT 111

Query: 117 PYSFRWYDYKEFKYSLAVNVIGFVYSGLQICDLVKYLITKKHTLNLRIRGYFSVAMDQGF 176
           PY F WY + EF+YS A NVIGFVYSGLQIC LV YLITKKHT+N +++GYF+VA+DQ  
Sbjct: 112 PYEFHWYKWDEFRYSFAANVIGFVYSGLQICHLVMYLITKKHTINPKLQGYFNVAIDQTL 171

Query: 177 AYLLMXXXXXXXXTIHISRSYWVGEGVHKFTDMXXXXXXXXXXXXXXXXXXXXVSGLML- 235
           AY+LM          H+ + YW+  G   F +M                    VSG++L 
Sbjct: 172 AYILMSASSSAATAAHLLKDYWLEHGADTFIEMANASVSMSFLAFGAFALASLVSGIILC 231

Query: 236 RF 237
           RF
Sbjct: 232 RF 233


>Medtr7g034390.1 | transmembrane protein, putative | HC |
           chr7:12870132-12874317 | 20130731
          Length = 303

 Score =  120 bits (300), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 63/124 (50%), Positives = 83/124 (66%), Gaps = 17/124 (13%)

Query: 58  VSGFLMSKKEEKWCRALLGVRVSAFVLCLISFTVMAADKVEGVVIESMDLFGNFFSTEEP 117
           V   L S+K     + LLG+RV+ FV CL+S++V+AAD+ +G  I+S             
Sbjct: 135 VKSLLRSEKVVSLNKVLLGLRVAGFVFCLVSWSVLAADRKKGWAIDS------------- 181

Query: 118 YSFRWYDYKEFKYSLAVNVIGFVYSGLQICDLVKYLITKKHTLNLRIRGYFSVAMDQGFA 177
               +Y YKEF+YSL+VNVIGFVYS +QICDLVKYLITKKH +  ++RGYF+ A+DQ   
Sbjct: 182 ----FYLYKEFRYSLSVNVIGFVYSAVQICDLVKYLITKKHIVEHKLRGYFTFALDQILT 237

Query: 178 YLLM 181
           YLLM
Sbjct: 238 YLLM 241


>Medtr7g034390.2 | transmembrane protein, putative | HC |
           chr7:12870052-12873486 | 20130731
          Length = 296

 Score =  119 bits (299), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 63/124 (50%), Positives = 83/124 (66%), Gaps = 17/124 (13%)

Query: 58  VSGFLMSKKEEKWCRALLGVRVSAFVLCLISFTVMAADKVEGVVIESMDLFGNFFSTEEP 117
           V   L S+K     + LLG+RV+ FV CL+S++V+AAD+ +G  I+S             
Sbjct: 135 VKSLLRSEKVVSLNKVLLGLRVAGFVFCLVSWSVLAADRKKGWAIDS------------- 181

Query: 118 YSFRWYDYKEFKYSLAVNVIGFVYSGLQICDLVKYLITKKHTLNLRIRGYFSVAMDQGFA 177
               +Y YKEF+YSL+VNVIGFVYS +QICDLVKYLITKKH +  ++RGYF+ A+DQ   
Sbjct: 182 ----FYLYKEFRYSLSVNVIGFVYSAVQICDLVKYLITKKHIVEHKLRGYFTFALDQILT 237

Query: 178 YLLM 181
           YLLM
Sbjct: 238 YLLM 241


>Medtr4g106940.1 | CASP ARALYDRAFT-like protein | HC |
           chr4:43951134-43949095 | 20130731
          Length = 288

 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/146 (39%), Positives = 78/146 (53%), Gaps = 20/146 (13%)

Query: 64  SKKEEKWCRALLGVRVSAFVLCLISFTVMAADKVEGVVIESMDLFGNFFSTEEPYSFRWY 123
           SK +    +  LG R+S  VLCLISF+VMAADK +G   +S D                 
Sbjct: 132 SKSDVMTGKVALGFRISEVVLCLISFSVMAADKTQGWSGDSFDR---------------- 175

Query: 124 DYKEFKYSLAVNVIGFVYSGLQICDLVKYLITKKHTLNLRIRGYFSVAMDQGFAYLLMXX 183
            YKE++Y L++ VIGFVY+G Q C+L   LIT KH +N  +R +F   MDQ  AYLL+  
Sbjct: 176 -YKEYRYCLSMTVIGFVYAGFQACELGYQLITGKHIVNHHLRFHFDFLMDQVLAYLLISS 234

Query: 184 XXXXXXTIHISRSYWVGEGVHKFTDM 209
                  +   +S W   G  +FT+M
Sbjct: 235 ASSAATRVDDWQSNW---GKDEFTEM 257


>Medtr3g078010.1 | CASP ARALYDRAFT-like protein | HC |
           chr3:35146346-35143714 | 20130731
          Length = 296

 Score = 95.5 bits (236), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 78/143 (54%), Gaps = 20/143 (13%)

Query: 67  EEKWCRALLGVRVSAFVLCLISFTVMAADKVEGVVIESMDLFGNFFSTEEPYSFRWYDYK 126
           EE   +A LG R+   V+CLISF+VMAA+K +G   +S D                  YK
Sbjct: 141 EEVTRKAALGFRLCEVVVCLISFSVMAANKTQGWSGDSYDR-----------------YK 183

Query: 127 EFKYSLAVNVIGFVYSGLQICDLVKYLITKKHTLNLRIRGYFSVAMDQGFAYLLMXXXXX 186
           E++Y L+VNVIGF Y+ LQ CDL   L+T+KH ++  +R +F   MDQ  AYLL+     
Sbjct: 184 EYRYCLSVNVIGFAYAALQACDLAFQLVTEKHMISHHLRYHFQFFMDQVVAYLLISASSS 243

Query: 187 XXXTIHISRSYWVGEGVHKFTDM 209
               +   +S W   G  +FT+M
Sbjct: 244 AATRVDDWQSNW---GKDEFTEM 263