Miyakogusa Predicted Gene

Lj2g3v1002570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1002570.1 tr|G7KI91|G7KI91_MEDTR ATPase OS=Medicago
truncatula GN=MTR_6g006910 PE=4 SV=1,85.71,0.0000000000002,
,TC80599.path1.1
         (42 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g006910.1 | phospholipid-transporting ATPase-like protein ...    80   4e-16

>Medtr6g006910.1 | phospholipid-transporting ATPase-like protein | HC
            | chr6:1274034-1282059 | 20130731
          Length = 1193

 Score = 80.1 bits (196), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 36/42 (85%), Positives = 39/42 (92%)

Query: 1    MYHDIIQRKRVEGFEVEISDELPTQVQGKLMHMRERLKQREP 42
            MYHDIIQRK+VEG E EISDELP QVQGKL+H+RERLKQREP
Sbjct: 1152 MYHDIIQRKQVEGSEFEISDELPRQVQGKLIHLRERLKQREP 1193