Miyakogusa Predicted Gene

Lj2g3v0992540.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0992540.1 Non Characterized Hit- tr|G7KT64|G7KT64_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,27.89,0.00004,
,CUFF.35846.1
         (252 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g069850.1 | hypothetical protein | LC | chr7:25756191-2575...    54   1e-07

>Medtr7g069850.1 | hypothetical protein | LC |
           chr7:25756191-25755091 | 20130731
          Length = 366

 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 21/147 (14%)

Query: 44  VFSVQGWVVFQKIYYKENWNYDLLLFCNPVSGERFELP---HLPLFQGQDFTHKIYVKPV 100
           + SV+GW++   +    +  +    F NPV+  R  +P   HLP   GQ    +IYV+ +
Sbjct: 62  IGSVEGWLI---VVDNSDKGFAKFFFLNPVTDVRITIPSKLHLPSIIGQ----RIYVRKM 114

Query: 101 FSTAPPNSSDFVVVLCAILYLPQEDRWRHQLAFYKVTDKKWALIPTDQSQR--FSEFVIL 158
            +++ PN       L  +L       + H +A YK+ +K W ++  D+     F++  I+
Sbjct: 115 TASSKPNCDGSDCYLVGLL-----SDYCH-IAIYKLFEKSWTIVEPDKDSGTYFTDIEII 168

Query: 159 DRKLYAMSMLLYKSGCVTVFNLTDSNN 185
            RKLY +      S  + V++L DS N
Sbjct: 169 GRKLYVIGS---SSNSILVYDLKDSTN 192