Miyakogusa Predicted Gene
- Lj2g3v0947360.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0947360.1 Non Characterized Hit- tr|I1N5H9|I1N5H9_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,81.3,0,polynuc_phos:
polyribonucleotide nucleotidyltransf,Polyribonucleotide
nucleotidyltransferase; POLYRI,CUFF.35833.1
(953 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr6g005460.1 | polyribonucleotide nucleotidyltransferase | HC... 1328 0.0
Medtr7g086640.1 | polyribonucleotide nucleotidyltransferase | HC... 280 7e-75
Medtr7g086640.2 | polyribonucleotide nucleotidyltransferase | HC... 280 7e-75
Medtr2g033020.1 | 30S ribosomal protein S1 | HC | chr2:12449707-... 68 5e-11
Medtr7g116920.2 | exosome complex exonuclease RRP41 | HC | chr7:... 63 2e-09
Medtr7g116920.3 | exosome complex exonuclease RRP41 | HC | chr7:... 63 2e-09
Medtr7g116920.6 | exosome complex exonuclease RRP41 | HC | chr7:... 63 2e-09
Medtr7g116920.1 | exosome complex exonuclease RRP41 | HC | chr7:... 63 2e-09
Medtr6g088270.1 | elongation factor Ts protein | HC | chr6:33420... 54 8e-07
Medtr7g116920.4 | exosome complex exonuclease RRP41 | HC | chr7:... 52 4e-06
Medtr7g116920.5 | exosome complex exonuclease RRP41 | HC | chr7:... 52 4e-06
>Medtr6g005460.1 | polyribonucleotide nucleotidyltransferase | HC |
chr6:766009-755137 | 20130731
Length = 973
Score = 1328 bits (3438), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 676/940 (71%), Positives = 754/940 (80%), Gaps = 19/940 (2%)
Query: 23 TKVLENFTEEFEIGSRIITLENGKIARFANGAVVLSMEDTKVLATVTSAKTDGSR-DFLP 81
TK+LE FTEEFE+G+R+IT +NGK RF+NGAVVL+MED K+L+ V +++ + +R DFLP
Sbjct: 38 TKLLETFTEEFEVGNRLITFQNGKYGRFSNGAVVLTMEDNKILSAVNTSRDEIARNDFLP 97
Query: 82 LTVDYQEKQFAQGMIPSTYTRREGAPKERELLVGRIIDRPIRPLFPPGFYHEVQVMASVL 141
LTVDY+EKQF+ G+IPSTY RREGAPKERELL RIIDRPIRPLFPPGFYHEVQV ASVL
Sbjct: 98 LTVDYEEKQFSHGLIPSTYMRREGAPKERELLCARIIDRPIRPLFPPGFYHEVQVTASVL 157
Query: 142 SSDGKQDPDVLAANATSAALMLSDXXXXXXXXXXXXXXXXXQFVVNPTMDELKLSDLNLV 201
SSDG QDP V AANATSAALMLSD QFVVNPTMDEL LSDLNL+
Sbjct: 158 SSDGTQDPIVYAANATSAALMLSDIPWGGPIGMIRIGRICGQFVVNPTMDELSLSDLNLI 217
Query: 202 YACTKDKTLMIDVQARDISDKDLEAGLRLAHPEAVKYIEPQIRLAAKAGKSKKEYKLSML 261
YACTKDKTLMIDVQAR+IS++DL+AGLR AHPEAVKYIEPQIRLAAKAGKSKKEYKLSML
Sbjct: 218 YACTKDKTLMIDVQAREISEEDLQAGLRFAHPEAVKYIEPQIRLAAKAGKSKKEYKLSML 277
Query: 262 SESTMEKVTSMAEAPIKAVFTDPSYGKFERGEALDNITQDVKRVLEEEGDEESLNFLPXX 321
S+ T+EKV+++AEAPIKAVFTDPSYGKFERG+ALDNITQDVK+VLEEEGDEES+ L
Sbjct: 278 SDKTLEKVSNLAEAPIKAVFTDPSYGKFERGKALDNITQDVKKVLEEEGDEESIKVLSKT 337
Query: 322 XXXXXXXXXXXXIIAEGSRVDGRQLDEVRPLYCEAGYISNLHGSAVFSRGETQVLCTVTL 381
IIAEGSRVDGRQLDEVRPLYCEAG IS L GSA F RGETQVLCTVTL
Sbjct: 338 IDTVRKKVVRKRIIAEGSRVDGRQLDEVRPLYCEAGCISKLRGSADFFRGETQVLCTVTL 397
Query: 382 GAPTDAQRLDSLVGPPTKRFMLHYSFPPFCINEVGKRGGLNRREVGHGTLAEKALLAVLP 441
GAP DAQ LDSLVGP +KRFMLHYSFPP+CI EVGKRGGLNRREVGHG LAEKALLAVLP
Sbjct: 398 GAPKDAQHLDSLVGPSSKRFMLHYSFPPYCIGEVGKRGGLNRREVGHGALAEKALLAVLP 457
Query: 442 PEDDFPYTFRVNSEVMASDGSTSMATVCGGSIALMDAGIPIREHVAGVSVGLVTELDPCT 501
PE FPYT RVNSEVMASDGSTSMA+VCG S+ALM+AGIPIREHVAG+SVGLV+ELDPCT
Sbjct: 458 PEVVFPYTVRVNSEVMASDGSTSMASVCGASMALMNAGIPIREHVAGISVGLVSELDPCT 517
Query: 502 GEITDYRILTDILGLEDHLGDIDFKIAGTRKGVTAIQLDMKPAGIPLDIICECLEPAHKA 561
GEI DYRILTDILGLEDHLGDIDFKIAGTRKGVTA QLDMKPAGIPLDIICECLEPAHKA
Sbjct: 518 GEIVDYRILTDILGLEDHLGDIDFKIAGTRKGVTAAQLDMKPAGIPLDIICECLEPAHKA 577
Query: 562 RLQILDLMEQAINAPRNK--DNSLRLVTLKYPNDSIRRLIGPMGALKKKMEDETGARISV 619
L I+D ME+ I P K +S ++VTLKY ND++RRLIGPMG L KK+E ETGAR+SV
Sbjct: 578 HLHIIDHMEREIKEPCTKQGSSSQQIVTLKYSNDALRRLIGPMGVLLKKLEMETGARLSV 637
Query: 620 GDGTLTIVAKNQSVMDKILEKIDFIVGRQIEVGGIYKGNVTSIKEYGAFIEFNGGQQGLL 679
GDGTLTIV KNQS+MDK LEK+ IVGR+IEVGGIYKG VTSIKEYGAF+EFNGG+QGLL
Sbjct: 638 GDGTLTIVTKNQSLMDKTLEKVVSIVGREIEVGGIYKGVVTSIKEYGAFVEFNGGKQGLL 697
Query: 680 HISELSHEPVSRVSDVVSIGQQLSLMCIGQDVHGNIKLSLKASLPRPGGLQTNDVVEGSA 739
HISELSHEPVS++SD+VSIGQQLSLMCIGQDVHGNIKLSLKA+L PGG +TN + E SA
Sbjct: 698 HISELSHEPVSKISDIVSIGQQLSLMCIGQDVHGNIKLSLKAALRGPGGSETNYIAEVSA 757
Query: 740 TSAKETANIWAPVWDASSTQEQQNSASQFPIGINEEVEEAKPPTSQTPVILIRSAEECDE 799
TSAK T N WAPVWDASS ++QNSAS+ PI N EV E KP SQTPVI+IRSA ECDE
Sbjct: 758 TSAKVTTNSWAPVWDASSITQEQNSASKLPIEKN-EVGETKPSASQTPVIVIRSAAECDE 816
Query: 800 EEKSTNL--NLSSKGPPIENGVQLGXXXXXXXXXXXXXXHTN--DSPSHSGPLPYTNAKK 855
EEKS +L N +S P I++GV+L + DSPS SG LP KK
Sbjct: 817 EEKSISLDHNQTSNSPLIDDGVKLDSSKSKSPSKSKPRKSQDAVDSPSQSGSLP----KK 872
Query: 856 PEFATKKESKSDIQRPEREESG-------AEKDLKVGTEVTAKVHQIRAHXXXXXXXXXX 908
P+ + +K+ KSD QR E E KDL +GT+ AKV QIRAH
Sbjct: 873 PKLSMQKKLKSDTQRAEGNEKKDKDNEPLTAKDLPLGTKFKAKVFQIRAHGLVLDLGGGV 932
Query: 909 XXMYRFEEDAKKDFKIGEEMQVVCSSFSSKGIPVLSALDN 948
MYRFE D K D K+G+EM VV SSFSSKGIPV+ +D+
Sbjct: 933 RGMYRFEGDGKTDLKVGDEMPVVLSSFSSKGIPVVFPVDD 972
>Medtr7g086640.1 | polyribonucleotide nucleotidyltransferase | HC |
chr7:33669227-33648523 | 20130731
Length = 926
Score = 280 bits (715), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 165/414 (39%), Positives = 243/414 (58%), Gaps = 14/414 (3%)
Query: 334 IIAEGSRVDGRQLDEVRPLYCEAGYISNLHGSAVFSRGETQVLCTVTLGAPTDAQRLDSL 393
I+ G R DGR +E+RP+ G + HGSA+F+RGETQ L TLG AQR+D+L
Sbjct: 439 IVEGGKRSDGRTPNEIRPINSSCGLLPRAHGSALFTRGETQSLAVATLGDNKMAQRIDNL 498
Query: 394 VG-PPTKRFMLHYSFPPFCINEVGKRGGLNRREVGHGTLAEKALLAVLPPEDDFPYTFRV 452
+ KRF L YSFPP C+ EVG+ G +RRE+GHG LAE++L +LP + DFPYT RV
Sbjct: 499 MDVDDYKRFYLQYSFPPSCVGEVGRIGAPSRREIGHGMLAERSLETILPSDKDFPYTIRV 558
Query: 453 NSEVMASDGSTSMATVCGGSIALMDAGIPIREHVAGVSVGLVTELDPCTGEITDYRILTD 512
S + S+GS+SMA+VCGG +AL DAG+PI+ +AG+++GLV + G+ T IL+D
Sbjct: 559 ESTITESNGSSSMASVCGGCLALQDAGVPIKSSIAGIAMGLVLDTKEFGGDGTPL-ILSD 617
Query: 513 ILGLEDHLGDIDFKIAGTRKGVTAIQLDMKPAGIPLDIICECLEPAHKARLQILDLMEQA 572
I G ED GD+DFK+AG G+TA Q+D+K GI L I+ E L A R IL M +
Sbjct: 618 ITGSEDASGDMDFKVAGNEDGITAFQMDIKVGGITLAIMREALLQAKDGRKHILGEMMKC 677
Query: 573 INAP--RNKDNSLRLVTLKYPNDSIRRLIGPMGALKKKMEDETG--ARISVGDGTLTIVA 628
+ P R + + +K D I +IG G K + +++G A + +GT+ I A
Sbjct: 678 LPPPAKRLSKYAPLIHVMKVRPDKINLIIGSGGKKVKSIIEQSGIEAIDTEDNGTVKIFA 737
Query: 629 KNQSVMD---KILEKIDFIVGRQIEVGGIYKG-NVTSIKEYGAFIEFNGGQQGLLHISEL 684
++ + ++ I+ + + +G IY+ + SI YGAF+E G++GL HISEL
Sbjct: 738 RDLASLEMSKAIISNLTMVP----TIGDIYRNCEIKSIVPYGAFVEIAPGREGLCHISEL 793
Query: 685 SHEPVSRVSDVVSIGQQLSLMCIGQDVHGNIKLSLKASLPRPGGLQTNDVVEGS 738
S +++ D +G ++ + I + G ++LS +A LP +N +GS
Sbjct: 794 SSAWLAKAEDAFKVGDRIDVKLIEINDKGQLRLSHRALLPDADPDNSNSTDKGS 847
Score = 136 bits (343), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 148/295 (50%), Gaps = 5/295 (1%)
Query: 18 SGSSGTKVLENFTEEFEIGSRIITLENGKIARFANGAVVLSMEDTKVLATVTSAKTDGS- 76
S G+ + + + +G R I +E G + R A+G+V ++ +T V TV
Sbjct: 75 SADGGSSHIAPHSVKIPVGDRYILVETGHMGRQASGSVTVTDGETIVYTTVCLDDIPSEP 134
Query: 77 RDFLPLTVDYQEKQFAQGMIPSTYTRREGAPKERELLVGRIIDRPIRPLFPPGFYHEVQV 136
DF PL+V+YQE+ A G + +REG K+ E+L+ R+IDRP+RP P GFYHE Q+
Sbjct: 135 SDFFPLSVNYQERFSAAGRTSGGFFKREGKTKDHEVLICRLIDRPLRPTMPKGFYHETQI 194
Query: 137 MASVLSSDGKQDPDVLAANATSAALMLSDXXXXXXXXXXXXXXXXXQFVVNPTMDELKLS 196
++ VLS DG PD LA A AL LS+ +++VNPT +E++ S
Sbjct: 195 LSWVLSYDGLHIPDSLAVTAAGIALALSEVPTSKAVAGVRVGLVGDKYIVNPTSEEMENS 254
Query: 197 DLNLVYACTKDKTLMIDVQARDISDKDLEAGLRLAHPEAVKYIEPQIR-LAAKAGKSKKE 255
+L+L+ A T LMI+ + ++ L + + +AV+ I ++ L K GK K
Sbjct: 255 ELDLMLAGTDSAILMIEGYGNFLPEEKLLKAVEVGQ-DAVRAICNEVEALVKKCGKPKMV 313
Query: 256 YKLSMLSESTMEKVTSMAEAPIKAVFTDPSYGKFERGEALDNITQDVKRVLEEEG 310
+ + + V +A + V K R +AL ++ + V ++L E G
Sbjct: 314 DAIKLPPPELYKHVEEIAGDELVKVLQ--IRNKIPRRKALSSLEEKVLKILSENG 366
>Medtr7g086640.2 | polyribonucleotide nucleotidyltransferase | HC |
chr7:33669227-33648523 | 20130731
Length = 926
Score = 280 bits (715), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 165/414 (39%), Positives = 243/414 (58%), Gaps = 14/414 (3%)
Query: 334 IIAEGSRVDGRQLDEVRPLYCEAGYISNLHGSAVFSRGETQVLCTVTLGAPTDAQRLDSL 393
I+ G R DGR +E+RP+ G + HGSA+F+RGETQ L TLG AQR+D+L
Sbjct: 439 IVEGGKRSDGRTPNEIRPINSSCGLLPRAHGSALFTRGETQSLAVATLGDNKMAQRIDNL 498
Query: 394 VG-PPTKRFMLHYSFPPFCINEVGKRGGLNRREVGHGTLAEKALLAVLPPEDDFPYTFRV 452
+ KRF L YSFPP C+ EVG+ G +RRE+GHG LAE++L +LP + DFPYT RV
Sbjct: 499 MDVDDYKRFYLQYSFPPSCVGEVGRIGAPSRREIGHGMLAERSLETILPSDKDFPYTIRV 558
Query: 453 NSEVMASDGSTSMATVCGGSIALMDAGIPIREHVAGVSVGLVTELDPCTGEITDYRILTD 512
S + S+GS+SMA+VCGG +AL DAG+PI+ +AG+++GLV + G+ T IL+D
Sbjct: 559 ESTITESNGSSSMASVCGGCLALQDAGVPIKSSIAGIAMGLVLDTKEFGGDGTPL-ILSD 617
Query: 513 ILGLEDHLGDIDFKIAGTRKGVTAIQLDMKPAGIPLDIICECLEPAHKARLQILDLMEQA 572
I G ED GD+DFK+AG G+TA Q+D+K GI L I+ E L A R IL M +
Sbjct: 618 ITGSEDASGDMDFKVAGNEDGITAFQMDIKVGGITLAIMREALLQAKDGRKHILGEMMKC 677
Query: 573 INAP--RNKDNSLRLVTLKYPNDSIRRLIGPMGALKKKMEDETG--ARISVGDGTLTIVA 628
+ P R + + +K D I +IG G K + +++G A + +GT+ I A
Sbjct: 678 LPPPAKRLSKYAPLIHVMKVRPDKINLIIGSGGKKVKSIIEQSGIEAIDTEDNGTVKIFA 737
Query: 629 KNQSVMD---KILEKIDFIVGRQIEVGGIYKG-NVTSIKEYGAFIEFNGGQQGLLHISEL 684
++ + ++ I+ + + +G IY+ + SI YGAF+E G++GL HISEL
Sbjct: 738 RDLASLEMSKAIISNLTMVP----TIGDIYRNCEIKSIVPYGAFVEIAPGREGLCHISEL 793
Query: 685 SHEPVSRVSDVVSIGQQLSLMCIGQDVHGNIKLSLKASLPRPGGLQTNDVVEGS 738
S +++ D +G ++ + I + G ++LS +A LP +N +GS
Sbjct: 794 SSAWLAKAEDAFKVGDRIDVKLIEINDKGQLRLSHRALLPDADPDNSNSTDKGS 847
Score = 136 bits (343), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 148/295 (50%), Gaps = 5/295 (1%)
Query: 18 SGSSGTKVLENFTEEFEIGSRIITLENGKIARFANGAVVLSMEDTKVLATVTSAKTDGS- 76
S G+ + + + +G R I +E G + R A+G+V ++ +T V TV
Sbjct: 75 SADGGSSHIAPHSVKIPVGDRYILVETGHMGRQASGSVTVTDGETIVYTTVCLDDIPSEP 134
Query: 77 RDFLPLTVDYQEKQFAQGMIPSTYTRREGAPKERELLVGRIIDRPIRPLFPPGFYHEVQV 136
DF PL+V+YQE+ A G + +REG K+ E+L+ R+IDRP+RP P GFYHE Q+
Sbjct: 135 SDFFPLSVNYQERFSAAGRTSGGFFKREGKTKDHEVLICRLIDRPLRPTMPKGFYHETQI 194
Query: 137 MASVLSSDGKQDPDVLAANATSAALMLSDXXXXXXXXXXXXXXXXXQFVVNPTMDELKLS 196
++ VLS DG PD LA A AL LS+ +++VNPT +E++ S
Sbjct: 195 LSWVLSYDGLHIPDSLAVTAAGIALALSEVPTSKAVAGVRVGLVGDKYIVNPTSEEMENS 254
Query: 197 DLNLVYACTKDKTLMIDVQARDISDKDLEAGLRLAHPEAVKYIEPQIR-LAAKAGKSKKE 255
+L+L+ A T LMI+ + ++ L + + +AV+ I ++ L K GK K
Sbjct: 255 ELDLMLAGTDSAILMIEGYGNFLPEEKLLKAVEVGQ-DAVRAICNEVEALVKKCGKPKMV 313
Query: 256 YKLSMLSESTMEKVTSMAEAPIKAVFTDPSYGKFERGEALDNITQDVKRVLEEEG 310
+ + + V +A + V K R +AL ++ + V ++L E G
Sbjct: 314 DAIKLPPPELYKHVEEIAGDELVKVLQ--IRNKIPRRKALSSLEEKVLKILSENG 366
>Medtr2g033020.1 | 30S ribosomal protein S1 | HC |
chr2:12449707-12453501 | 20130731
Length = 409
Score = 67.8 bits (164), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 648 QIEVGGIYKGNVTSIKEYGAFIEFNGGQQGLLHISELSHEPVSRVSDVVSIGQQLSLMCI 707
Q+ +G + G V S+K YGAFI+ GG GLLH+S++SH+ +S + V+ G L +M +
Sbjct: 253 QLGIGSVVTGTVQSLKPYGAFIDIGGGISGLLHVSQISHDRISDIVTVLQPGDTLKVMIL 312
Query: 708 GQDV-HGNIKLSLKASLPRPGGLQTN 732
D G + LS K P PG + N
Sbjct: 313 SHDRERGRVSLSTKKLEPTPGDMIRN 338
>Medtr7g116920.2 | exosome complex exonuclease RRP41 | HC |
chr7:48284765-48280111 | 20130731
Length = 241
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 97/223 (43%), Gaps = 31/223 (13%)
Query: 337 EGSRVDGRQLDEVRPLYCEAGYISNLHGSAVFSRGETQVLCTVTLGAPTDAQ-RLDSLVG 395
EG R DGR+ E+R + E G +S GSA+F G T+V+ V P + Q R +
Sbjct: 7 EGLRSDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY--GPREVQNRSQQMSD 64
Query: 396 PPTKRFMLHYSFPPFCINEVGKRGGLNRRE-----VGHGTLAEKALLAVLPPEDDFPYTF 450
R YS F + ++ +RR V T+ E L ++P Y
Sbjct: 65 KALVR--CEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEECILTHLMPRSQIDIYV- 121
Query: 451 RVNSEVMASDGSTSMATVCGGSIALMDAGIPIREHVAGVSVGLVTELDPCTGEITDYRIL 510
+V+ +DG T A + ++AL DAGIP+ + V S G + L
Sbjct: 122 ----QVLQADGGTRSACINAATLALADAGIPMLDLVTSCSAGYLNSTP-----------L 166
Query: 511 TDILGLEDHLG--DIDFKIAGTRKGVTAIQLDMKPAGIPLDII 551
D+ +ED G D+ I VT +Q+D K +P+DI+
Sbjct: 167 LDLNYVEDSAGGPDVTVGILPKLDKVTLLQMDSK---LPIDIL 206
>Medtr7g116920.3 | exosome complex exonuclease RRP41 | HC |
chr7:48284765-48280111 | 20130731
Length = 241
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 97/223 (43%), Gaps = 31/223 (13%)
Query: 337 EGSRVDGRQLDEVRPLYCEAGYISNLHGSAVFSRGETQVLCTVTLGAPTDAQ-RLDSLVG 395
EG R DGR+ E+R + E G +S GSA+F G T+V+ V P + Q R +
Sbjct: 7 EGLRSDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY--GPREVQNRSQQMSD 64
Query: 396 PPTKRFMLHYSFPPFCINEVGKRGGLNRRE-----VGHGTLAEKALLAVLPPEDDFPYTF 450
R YS F + ++ +RR V T+ E L ++P Y
Sbjct: 65 KALVR--CEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEECILTHLMPRSQIDIYV- 121
Query: 451 RVNSEVMASDGSTSMATVCGGSIALMDAGIPIREHVAGVSVGLVTELDPCTGEITDYRIL 510
+V+ +DG T A + ++AL DAGIP+ + V S G + L
Sbjct: 122 ----QVLQADGGTRSACINAATLALADAGIPMLDLVTSCSAGYLNSTP-----------L 166
Query: 511 TDILGLEDHLG--DIDFKIAGTRKGVTAIQLDMKPAGIPLDII 551
D+ +ED G D+ I VT +Q+D K +P+DI+
Sbjct: 167 LDLNYVEDSAGGPDVTVGILPKLDKVTLLQMDSK---LPIDIL 206
>Medtr7g116920.6 | exosome complex exonuclease RRP41 | HC |
chr7:48284765-48280111 | 20130731
Length = 241
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 97/223 (43%), Gaps = 31/223 (13%)
Query: 337 EGSRVDGRQLDEVRPLYCEAGYISNLHGSAVFSRGETQVLCTVTLGAPTDAQ-RLDSLVG 395
EG R DGR+ E+R + E G +S GSA+F G T+V+ V P + Q R +
Sbjct: 7 EGLRSDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY--GPREVQNRSQQMSD 64
Query: 396 PPTKRFMLHYSFPPFCINEVGKRGGLNRRE-----VGHGTLAEKALLAVLPPEDDFPYTF 450
R YS F + ++ +RR V T+ E L ++P Y
Sbjct: 65 KALVR--CEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEECILTHLMPRSQIDIYV- 121
Query: 451 RVNSEVMASDGSTSMATVCGGSIALMDAGIPIREHVAGVSVGLVTELDPCTGEITDYRIL 510
+V+ +DG T A + ++AL DAGIP+ + V S G + L
Sbjct: 122 ----QVLQADGGTRSACINAATLALADAGIPMLDLVTSCSAGYLNSTP-----------L 166
Query: 511 TDILGLEDHLG--DIDFKIAGTRKGVTAIQLDMKPAGIPLDII 551
D+ +ED G D+ I VT +Q+D K +P+DI+
Sbjct: 167 LDLNYVEDSAGGPDVTVGILPKLDKVTLLQMDSK---LPIDIL 206
>Medtr7g116920.1 | exosome complex exonuclease RRP41 | HC |
chr7:48284765-48280111 | 20130731
Length = 241
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 97/223 (43%), Gaps = 31/223 (13%)
Query: 337 EGSRVDGRQLDEVRPLYCEAGYISNLHGSAVFSRGETQVLCTVTLGAPTDAQ-RLDSLVG 395
EG R DGR+ E+R + E G +S GSA+F G T+V+ V P + Q R +
Sbjct: 7 EGLRSDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY--GPREVQNRSQQMSD 64
Query: 396 PPTKRFMLHYSFPPFCINEVGKRGGLNRRE-----VGHGTLAEKALLAVLPPEDDFPYTF 450
R YS F + ++ +RR V T+ E L ++P Y
Sbjct: 65 KALVR--CEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEECILTHLMPRSQIDIYV- 121
Query: 451 RVNSEVMASDGSTSMATVCGGSIALMDAGIPIREHVAGVSVGLVTELDPCTGEITDYRIL 510
+V+ +DG T A + ++AL DAGIP+ + V S G + L
Sbjct: 122 ----QVLQADGGTRSACINAATLALADAGIPMLDLVTSCSAGYLNSTP-----------L 166
Query: 511 TDILGLEDHLG--DIDFKIAGTRKGVTAIQLDMKPAGIPLDII 551
D+ +ED G D+ I VT +Q+D K +P+DI+
Sbjct: 167 LDLNYVEDSAGGPDVTVGILPKLDKVTLLQMDSK---LPIDIL 206
>Medtr6g088270.1 | elongation factor Ts protein | HC |
chr6:33420399-33413908 | 20130731
Length = 1054
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 652 GGIYKGNVTSIKEYGAFIEFNGGQQGLLHISELSHEPVSRVSDVVSIGQQLSLMCI 707
G + G V SI+ +GAF++F GL+HIS LS V VS VVS+GQ++++ I
Sbjct: 145 GAAFTGKVKSIQPFGAFVDFGAFTDGLVHISMLSDSFVKDVSSVVSLGQEVTVKVI 200
>Medtr7g116920.4 | exosome complex exonuclease RRP41 | HC |
chr7:48284765-48280111 | 20130731
Length = 223
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 89/211 (42%), Gaps = 31/211 (14%)
Query: 349 VRPLYCEAGYISNLHGSAVFSRGETQVLCTVTLGAPTDAQ-RLDSLVGPPTKRFMLHYSF 407
+R + E G +S GSA+F G T+V+ V P + Q R + R YS
Sbjct: 1 MRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY--GPREVQNRSQQMSDKALVR--CEYSM 56
Query: 408 PPFCINEVGKRGGLNRRE-----VGHGTLAEKALLAVLPPEDDFPYTFRVNSEVMASDGS 462
F + ++ +RR V T+ E L ++P Y +V+ +DG
Sbjct: 57 ANFSTGDRMRKPKGDRRSTEISLVIRQTMEECILTHLMPRSQIDIYV-----QVLQADGG 111
Query: 463 TSMATVCGGSIALMDAGIPIREHVAGVSVGLVTELDPCTGEITDYRILTDILGLEDHLG- 521
T A + ++AL DAGIP+ + V S G + L D+ +ED G
Sbjct: 112 TRSACINAATLALADAGIPMLDLVTSCSAGYLNSTP-----------LLDLNYVEDSAGG 160
Query: 522 -DIDFKIAGTRKGVTAIQLDMKPAGIPLDII 551
D+ I VT +Q+D K +P+DI+
Sbjct: 161 PDVTVGILPKLDKVTLLQMDSK---LPIDIL 188
>Medtr7g116920.5 | exosome complex exonuclease RRP41 | HC |
chr7:48284765-48280111 | 20130731
Length = 223
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 89/211 (42%), Gaps = 31/211 (14%)
Query: 349 VRPLYCEAGYISNLHGSAVFSRGETQVLCTVTLGAPTDAQ-RLDSLVGPPTKRFMLHYSF 407
+R + E G +S GSA+F G T+V+ V P + Q R + R YS
Sbjct: 1 MRQIRAEIGAVSKADGSAIFEMGNTKVIAAVY--GPREVQNRSQQMSDKALVR--CEYSM 56
Query: 408 PPFCINEVGKRGGLNRRE-----VGHGTLAEKALLAVLPPEDDFPYTFRVNSEVMASDGS 462
F + ++ +RR V T+ E L ++P Y +V+ +DG
Sbjct: 57 ANFSTGDRMRKPKGDRRSTEISLVIRQTMEECILTHLMPRSQIDIYV-----QVLQADGG 111
Query: 463 TSMATVCGGSIALMDAGIPIREHVAGVSVGLVTELDPCTGEITDYRILTDILGLEDHLG- 521
T A + ++AL DAGIP+ + V S G + L D+ +ED G
Sbjct: 112 TRSACINAATLALADAGIPMLDLVTSCSAGYLNSTP-----------LLDLNYVEDSAGG 160
Query: 522 -DIDFKIAGTRKGVTAIQLDMKPAGIPLDII 551
D+ I VT +Q+D K +P+DI+
Sbjct: 161 PDVTVGILPKLDKVTLLQMDSK---LPIDIL 188