Miyakogusa Predicted Gene

Lj2g3v0946320.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0946320.1 Non Characterized Hit- tr|A5AN10|A5AN10_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,42.19,5e-16,seg,NULL,CUFF.35832.1
         (230 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g005430.1 | hypothetical protein | HC | chr6:737302-741738...   120   1e-27
Medtr6g005430.2 | hypothetical protein | HC | chr6:737321-741738...    80   2e-15

>Medtr6g005430.1 | hypothetical protein | HC | chr6:737302-741738 |
           20130731
          Length = 236

 Score =  120 bits (301), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/232 (37%), Positives = 116/232 (50%), Gaps = 35/232 (15%)

Query: 10  TKFVHLFRFKIXXXXXXXXXXXXRFNAFTSTTNCIKWKPDSVLRTLLKSKTLHLPFSPRC 69
           TKF++LF+F              RFN FTST+  +K K   + ++             + 
Sbjct: 9   TKFLNLFKFS-------SFPSTSRFNNFTSTSLKLKVKILKLSQS-------------KR 48

Query: 70  SFNFQTHLTATASYLRNFRFSGGGSIVLGLXXXXXXXXXXXHAMDAGDAFVDD-PRNDSQ 128
            F FQ  L  T++YLRNFR+SG G I   L           +A +A DA VDD  R+DS 
Sbjct: 49  GFIFQQPLNLTSNYLRNFRYSGIGCI---LGVSVATASTIAYATNAEDALVDDHRRSDSL 105

Query: 129 DPSKE----------EENGDQLWNLTRKFWLPVLFFLTVLSNLEDPXXXXXXXXXXXXXX 178
           +              E   + LW L R+FW+ + F  TVL+ L+ P              
Sbjct: 106 NLDYPLTTLLVKIWLERYMEYLWKLVRRFWVSIFFVATVLTKLDHPFTILFIKLTLFLLS 165

Query: 179 XXPNPFSVYIFVDQLCQQYVHQGHQFL-KKSVYASKVEVQDYTLLCLAAVEI 229
             PNPFSV +FVDQLC+Q + +  +F  +KS YASKVEVQDY LLCLA VE+
Sbjct: 166 TNPNPFSVNVFVDQLCRQSICKDTKFFDRKSFYASKVEVQDYKLLCLADVEV 217


>Medtr6g005430.2 | hypothetical protein | HC | chr6:737321-741738 |
           20130731
          Length = 208

 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 90/201 (44%), Gaps = 36/201 (17%)

Query: 10  TKFVHLFRFKIXXXXXXXXXXXXRFNAFTSTTNCIKWKPDSVLRTLLKSKTLHLPFSPRC 69
           TKF++LF+F              RFN FTST+  +K K   + ++             + 
Sbjct: 9   TKFLNLFKFS-------SFPSTSRFNNFTSTSLKLKVKILKLSQS-------------KR 48

Query: 70  SFNFQTHLTATASYLRNFRFSGGGSIVLGLXXXXXXXXXXXHAMDAGDAFVDD-PRNDSQ 128
            F FQ  L  T++YLRNFR+SG G I   L           +A +A DA VDD  R+DS 
Sbjct: 49  GFIFQQPLNLTSNYLRNFRYSGIGCI---LGVSVATASTIAYATNAEDALVDDHRRSDSL 105

Query: 129 DPSKE----------EENGDQLWNLTRKFWLPVLFFLTVLSNLEDPXXXXXXXXXXXXXX 178
           +              E   + LW L R+FW+ + F  TVL+ L+ P              
Sbjct: 106 NLDYPLTTLLVKIWLERYMEYLWKLVRRFWVSIFFVATVLTKLDHPFTILFIKLTLFLLS 165

Query: 179 XXPNPFSVYIFVDQL--CQQY 197
             PNPFSV +FVDQ+  C  Y
Sbjct: 166 TNPNPFSVNVFVDQVRYCSNY 186