Miyakogusa Predicted Gene

Lj2g3v0945240.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0945240.1 Non Characterized Hit- tr|I3SKX4|I3SKX4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4
SV=1,52.88,2e-18,seg,NULL,CUFF.35821.1
         (106 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g005250.1 | hypothetical protein | HC | chr6:675011-675781...   125   1e-29
Medtr8g069510.1 | hypothetical protein | HC | chr8:29146537-2914...    81   2e-16
Medtr5g033220.1 | hypothetical protein | HC | chr5:14327940-1432...    75   1e-14
Medtr5g096855.1 | hypothetical protein | HC | chr5:42377222-4237...    46   8e-06

>Medtr6g005250.1 | hypothetical protein | HC | chr6:675011-675781 |
           20130731
          Length = 111

 Score =  125 bits (313), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 71/109 (65%), Positives = 76/109 (69%), Gaps = 5/109 (4%)

Query: 1   MGFSK---KAQAETGLESEAKKWVIAGISVRSLKPINTKQRGKENDCVXXXXXXAGRSTT 57
           MGFSK   K Q E  LESEAKKWVIAGIS+RSLKPINTK   K N  V         STT
Sbjct: 1   MGFSKNSKKTQIEKSLESEAKKWVIAGISLRSLKPINTKMSTK-NGAVFDEEDEEN-STT 58

Query: 58  PTAKEARIPEKLRCPPAPRKRRPSRCNNFSGVREFFTPPDLETVFKCHV 106
           PTAKEARIP  + CPPAPRK++ S+CNN  G REFF  PDLETVFK  V
Sbjct: 59  PTAKEARIPVNMSCPPAPRKKKVSKCNNVVGGREFFKCPDLETVFKVRV 107


>Medtr8g069510.1 | hypothetical protein | HC |
           chr8:29146537-29145666 | 20130731
          Length = 116

 Score = 81.3 bits (199), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/113 (47%), Positives = 68/113 (60%), Gaps = 8/113 (7%)

Query: 1   MGFSKKAQA-ETGLESE--AKKWVIAGISVRS-LKPINTKQRGKENDCVXXXXXXAGRST 56
           MG+S+KAQ  E G ESE  ++KWVIAGI++R+ LKPI T    KE              +
Sbjct: 1   MGYSEKAQVVEGGFESENNSRKWVIAGIALRAPLKPIQTNSIEKEQQ-KEEVEIEIEECS 59

Query: 57  TPTAKEARIPEKLRCPPAPRKRRPSRCNNFSG---VREFFTPPDLETVFKCHV 106
           TPT +E++IP    CPPAPRK++ S   N+     VREFF  PDLE VF  HV
Sbjct: 60  TPTNEESKIPTSFTCPPAPRKQKSSLKWNYQSSGVVREFFKAPDLENVFIRHV 112


>Medtr5g033220.1 | hypothetical protein | HC |
           chr5:14327940-14326721 | 20130731
          Length = 115

 Score = 75.5 bits (184), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/119 (43%), Positives = 66/119 (55%), Gaps = 23/119 (19%)

Query: 1   MGF-SKKAQAETGLESEA---KKWVIAGISVRSLKPINT--------KQRGKENDCVXXX 48
           MG  S  +Q E GL   +   +KWVI   +  +LKPI+T        ++ G E +C    
Sbjct: 1   MGLLSDNSQVEGGLVENSEKNRKWVINLRTPLNLKPIHTIPLEKSKQEESGMEEEC---- 56

Query: 49  XXXAGRSTTPTAKEARIPEKLRCPPAPRKRRPSRCNNFSG-VREFFTPPDLETVFKCHV 106
                 STTP  + +RIP  L CPPAPRKR+ S   N+ G  REFFTPP+LETVF  HV
Sbjct: 57  ------STTPRGEGSRIPTTLICPPAPRKRKASLKWNYRGKAREFFTPPELETVFIRHV 109


>Medtr5g096855.1 | hypothetical protein | HC |
           chr5:42377222-42376845 | 20130731
          Length = 125

 Score = 45.8 bits (107), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 24/44 (54%), Positives = 29/44 (65%), Gaps = 2/44 (4%)

Query: 56  TTPTAKEARIPEKLRCPPAPRKRRPSRCNNFSGVREFFTPPDLE 99
           +TP  K+ RIPE   CPPAP+K+R    +NFS  R FF  PDLE
Sbjct: 68  STPKGKKFRIPEISTCPPAPKKQRV--LSNFSLRRSFFATPDLE 109