Miyakogusa Predicted Gene

Lj2g3v0934030.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0934030.1 CUFF.35804.1
         (195 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g005040.1 | oleosin | HC | chr6:582315-581444 | 20130731        155   3e-38
Medtr7g033775.1 | oleosin | HC | chr7:12344118-12343238 | 20130731    152   3e-37
Medtr5g035040.1 | GNAT family acetyltransferase | LC | chr5:1524...    91   5e-19
Medtr4g105200.1 | oleosin | HC | chr4:43606860-43607765 | 20130731     80   9e-16
Medtr3g109190.1 | oleosin | HC | chr3:50484930-50485832 | 20130731     73   2e-13
Medtr4g111770.1 | oleosin | HC | chr4:46184394-46185411 | 20130731     64   6e-11
Medtr1g090250.1 | oleosin | HC | chr1:40430572-40429869 | 20130731     58   6e-09

>Medtr6g005040.1 | oleosin | HC | chr6:582315-581444 | 20130731
          Length = 193

 Score =  155 bits (391), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/195 (51%), Positives = 114/195 (58%), Gaps = 11/195 (5%)

Query: 1   MAQPQQQVHVHTTATHRYETGGANPPQRYEAGGINFNNQPQRYXXXXXX-FSSLFPERGP 59
           MAQPQ  V VHTTAT R    G  P Q+         + P  +       F+SLFPERGP
Sbjct: 1   MAQPQ--VQVHTTATTRTYETGTYPSQQQHLRSKEGVDYPYYHRSNDGGGFTSLFPERGP 58

Query: 60  SASQIIAVAAGVPXXXXXXXXXXXXXXXXXXXXXVFTPLLILFSPVIVPAVMTIGLAVAG 119
           SASQI+A   G+                      + TPL ILFSPV++PA +TIGLAVAG
Sbjct: 59  SASQILASLGGLFLGGTLLLLASFSFFASLIGLAIMTPLFILFSPVLIPAALTIGLAVAG 118

Query: 120 ILTSGAFGLTGLMSFSWLMNYIRETRGIVPEQLDYAKNRMADMADY-------VGQKTKE 172
           ILT+ A GLTGLMS SW   YIR+    VP Q+D  K RMAD+ DY       VGQKTKE
Sbjct: 119 ILTADACGLTGLMSLSWTARYIRDLHAAVPGQMD-VKGRMADVVDYVGQKTKDVGQKTKE 177

Query: 173 VGHDIQTKAHEAKRT 187
           VG DIQTKAHEAKRT
Sbjct: 178 VGQDIQTKAHEAKRT 192


>Medtr7g033775.1 | oleosin | HC | chr7:12344118-12343238 | 20130731
          Length = 191

 Score =  152 bits (383), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 91/184 (49%), Positives = 106/184 (57%), Gaps = 23/184 (12%)

Query: 7   QVHVHTTATHRYETGGANPPQRYEAGGINFNNQPQRYXXXXXXFSSLFPERGPSASQIIA 66
           Q+ VHTT T RY+T    PP  YE GG                +S     + PS SQ++A
Sbjct: 10  QIQVHTT-TRRYDT--ITPPLHYEGGG----------GVATHHYSD---NKSPSTSQVLA 53

Query: 67  VAAGVPXXXXXXXXXXXXXXXXXXXXXVFTPLLILFSPVIVPAVMTIGLAVAGILTSGAF 126
           V  G+P                     V TPL ILFSPVIVPA + IGLAVAG LTSGAF
Sbjct: 54  VITGLPVGGILLALAGLSLLGTLTGLAVTTPLFILFSPVIVPATIVIGLAVAGFLTSGAF 113

Query: 127 GLTGLMSFSWLMNYIRETRGIVPEQLDYAKNRMADMADYV-------GQKTKEVGHDIQT 179
           GLT L SFSW+MNYIR+T+G VPEQL+ AK  MAD+  YV       GQKTKEVG DIQ+
Sbjct: 114 GLTALSSFSWVMNYIRQTQGTVPEQLESAKQGMADVVGYVGQKTKEAGQKTKEVGQDIQS 173

Query: 180 KAHE 183
           KA +
Sbjct: 174 KAQD 177


>Medtr5g035040.1 | GNAT family acetyltransferase | LC |
           chr5:15248625-15245870 | 20130731
          Length = 376

 Score = 91.3 bits (225), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 65/135 (48%), Gaps = 15/135 (11%)

Query: 27  QRYEAGGINFNNQPQRYXXXXXXFSSLFPERGPSASQIIAVAAGVPXXXXXXXXXXXXXX 86
           QRYE GG+  ++  +R                PS SQ++A+  G+               
Sbjct: 15  QRYEGGGVTTHDSEKR---------------SPSTSQVLAIITGLHVGIILLALAGLYLL 59

Query: 87  XXXXXXXVFTPLLILFSPVIVPAVMTIGLAVAGILTSGAFGLTGLMSFSWLMNYIRETRG 146
                  V TPL +LFSPV++PA +  GL V    TS  FGLT L  FSW+MNYIR  +G
Sbjct: 60  GTLTGVVVTTPLFVLFSPVLIPATIVTGLTVVSFFTSAIFGLTALSLFSWVMNYIRHAQG 119

Query: 147 IVPEQLDYAKNRMAD 161
            + E L+  K RM +
Sbjct: 120 TLQEHLELEKQRMVE 134


>Medtr4g105200.1 | oleosin | HC | chr4:43606860-43607765 | 20130731
          Length = 199

 Score = 80.5 bits (197), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 2/135 (1%)

Query: 59  PSASQIIAVAAGVPXXXXXXXXXXXXXXXXXXXXXVFTPLLILFSPVIVPAVMTIGLAVA 118
           PS SQ+I +A  VP                     V TPL I FSP+++ A + IGLA+A
Sbjct: 36  PSTSQLIVLATLVPFGATLLILAGLTLTATVVGLAVTTPLFIFFSPILLAAAVVIGLAIA 95

Query: 119 GILTSGAFGLTGLMSFSWLMNYIRETRGIVPEQLDYAKNRMADMADYVGQKTKEVGHDIQ 178
           G LTSGAFG+T L SF+W+ +Y+R +R +    + +  + +A    +   +T  +GH+ Q
Sbjct: 96  GFLTSGAFGITSLSSFAWVASYLRRSRFLEKVNVKHHHHAIAKPPRFDADET--LGHESQ 153

Query: 179 TKAHEAKRTPITTHD 193
               +  R      D
Sbjct: 154 INLEDRDRVESMAQD 168


>Medtr3g109190.1 | oleosin | HC | chr3:50484930-50485832 | 20130731
          Length = 161

 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 54/91 (59%)

Query: 94  VFTPLLILFSPVIVPAVMTIGLAVAGILTSGAFGLTGLMSFSWLMNYIRETRGIVPEQLD 153
           + TPLL++FSP++VPA + + L   G + SG  G+  + + SW+ NY+   R    + LD
Sbjct: 66  IATPLLVIFSPILVPAAIVLSLIAGGFMFSGGCGVAAIAALSWIYNYVSGNRPAGTDTLD 125

Query: 154 YAKNRMADMADYVGQKTKEVGHDIQTKAHEA 184
           YAK  + D A  V ++ K+ G+  Q +A +A
Sbjct: 126 YAKGLITDKARDVKERAKDYGNYAQGRAQDA 156


>Medtr4g111770.1 | oleosin | HC | chr4:46184394-46185411 | 20130731
          Length = 151

 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 51/90 (56%)

Query: 95  FTPLLILFSPVIVPAVMTIGLAVAGILTSGAFGLTGLMSFSWLMNYIRETRGIVPEQLDY 154
           F+PL+I+ SP+ VPA   + L  AG L+   FG+  + + SW   Y R       +++DY
Sbjct: 58  FSPLIIVSSPIWVPAGTFLFLLAAGFLSMCGFGVVAVAASSWFYRYFRGLHPPGSDRVDY 117

Query: 155 AKNRMADMADYVGQKTKEVGHDIQTKAHEA 184
           A+NR+ D A +V    +E G  +Q+K  +A
Sbjct: 118 ARNRLYDTASHVKDYAREYGGYLQSKVKDA 147


>Medtr1g090250.1 | oleosin | HC | chr1:40430572-40429869 | 20130731
          Length = 149

 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 42/70 (60%)

Query: 94  VFTPLLILFSPVIVPAVMTIGLAVAGILTSGAFGLTGLMSFSWLMNYIRETRGIVPEQLD 153
           + TPL +LFSPV+VPAV+T+ L   G   SG FG+  +   +W+  Y+        +QLD
Sbjct: 63  IATPLFLLFSPVLVPAVITVALLTLGFFVSGGFGVAAITVLAWIYRYVTGKHPPGADQLD 122

Query: 154 YAKNRMADMA 163
            A++++ + A
Sbjct: 123 TARHKLMNKA 132