Miyakogusa Predicted Gene

Lj2g3v0932890.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0932890.1 tr|B9IEW5|B9IEW5_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_776137 PE=4
SV=1,53.95,3e-18,Raffinose_syn,Raffinose synthase; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL,TC80236.path1.1
         (76 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g004880.1 | raffinose synthase or seed inhibition protein ...   127   3e-30
Medtr4g105250.1 | raffinose synthase or seed inhibition protein ...   109   6e-25
Medtr3g077280.1 | galactinol-raffinose galactosyltransferase | H...   104   2e-23
Medtr1g052515.1 | galactinol-raffinose galactosyltransferase | H...    47   3e-06

>Medtr6g004880.1 | raffinose synthase or seed inhibition protein |
           HC | chr6:485489-490474 | 20130731
          Length = 787

 Score =  127 bits (319), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 56/76 (73%), Positives = 66/76 (86%)

Query: 1   MLNTGGAIQSLDFDEAQNLVQVGVRGTGEMRVFSSERPSACRIDGKEADFEYEGSMVIIQ 60
           MLN GGAIQS ++ EAQ+LVQVG+RG GEMRV++SE+P AC IDGKE DFEY+  MV+IQ
Sbjct: 712 MLNNGGAIQSFEYLEAQDLVQVGIRGAGEMRVYASEKPRACGIDGKEVDFEYKEFMVVIQ 771

Query: 61  VPWPSSSKLSYVQYIF 76
           VPWPSSSK S+VQYIF
Sbjct: 772 VPWPSSSKWSFVQYIF 787


>Medtr4g105250.1 | raffinose synthase or seed inhibition protein |
           HC | chr4:43640686-43636241 | 20130731
          Length = 778

 Score =  109 bits (272), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 46/76 (60%), Positives = 62/76 (81%)

Query: 1   MLNTGGAIQSLDFDEAQNLVQVGVRGTGEMRVFSSERPSACRIDGKEADFEYEGSMVIIQ 60
           MLN+GG+I SL+FDE ++ VQ+GVRG GEMRVF SE+P +C IDG+   F+Y+ SMV++ 
Sbjct: 703 MLNSGGSIMSLEFDEEKDSVQIGVRGHGEMRVFVSEKPVSCMIDGEAVKFDYDDSMVMLH 762

Query: 61  VPWPSSSKLSYVQYIF 76
           VPWP SS+LS V+Y+F
Sbjct: 763 VPWPCSSRLSVVEYLF 778


>Medtr3g077280.1 | galactinol-raffinose galactosyltransferase | HC |
           chr3:34699323-34695961 | 20130731
          Length = 786

 Score =  104 bits (260), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 43/76 (56%), Positives = 60/76 (78%)

Query: 1   MLNTGGAIQSLDFDEAQNLVQVGVRGTGEMRVFSSERPSACRIDGKEADFEYEGSMVIIQ 60
           MLN+GGA+QS++FD+  +LV++GVRG GEM VF+SE+P  C+IDG    F+Y   MV +Q
Sbjct: 711 MLNSGGAVQSVEFDDHASLVKIGVRGCGEMSVFASEKPVCCKIDGVAVKFDYVDKMVRVQ 770

Query: 61  VPWPSSSKLSYVQYIF 76
           +PWPSSS LS V+++F
Sbjct: 771 IPWPSSSTLSLVEFLF 786


>Medtr1g052515.1 | galactinol-raffinose galactosyltransferase | HC |
           chr1:21378819-21372033 | 20130731
          Length = 740

 Score = 47.4 bits (111), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 1/72 (1%)

Query: 1   MLNTGGAIQSLDFDE-AQNLVQVGVRGTGEMRVFSSERPSACRIDGKEADFEYEGSMVII 59
           M NTGGA++  +  + A     + VRG+G   V+SS++P  C +   E DF YE    ++
Sbjct: 661 MFNTGGAVEHFEIHKGATASASLRVRGSGRFGVYSSQKPVKCVVGDNETDFNYESETGLL 720

Query: 60  QVPWPSSSKLSY 71
               P S +  Y
Sbjct: 721 TFYMPVSVEDMY 732