Miyakogusa Predicted Gene

Lj2g3v0920490.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0920490.1 Non Characterized Hit- tr|B6TTM1|B6TTM1_MAIZE
Putative uncharacterized protein OS=Zea mays PE=4
SV=1,65.62,0.000000000000001,no description,Ribosomal protein S5
domain 2-type fold, subgroup; no description,NULL;
GHMP_kinases_,CUFF.35763.1
         (356 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g004430.1 | GHMP kinase ATP-binding protein, putative | HC...   610   e-175
Medtr7g117870.1 | L-fucokinase/GDP-L-fucose pyrophosphorylase | ...    49   9e-06

>Medtr6g004430.1 | GHMP kinase ATP-binding protein, putative | HC |
           chr6:276122-272083 | 20130731
          Length = 364

 Score =  610 bits (1573), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 295/349 (84%), Positives = 319/349 (91%)

Query: 8   VVIEHKAYARVGLLGNPSDVYYGNTISLNIANFYATVKLVPSKDLFIQPHPIHDLVHFES 67
           VVIEHKAYARVGLLGNPSDVYYGNTI+ +I+NF+ATVKL+PS +L IQPHP HDLV+F S
Sbjct: 15  VVIEHKAYARVGLLGNPSDVYYGNTIAFSISNFFATVKLIPSIELIIQPHPTHDLVNFSS 74

Query: 68  LRQMVGRVNSDGYYGGVRLLMAICKVFHNYCKEKSIALHDRNFTLSYDTNIPRQSGLSGS 127
             Q+V R+N++GYYGGVRLLMAI KVF+NYCK+ +I LH  NFTLSYDTNIPRQSGLSGS
Sbjct: 75  NHQLVDRINAEGYYGGVRLLMAIYKVFYNYCKDNNIHLHHTNFTLSYDTNIPRQSGLSGS 134

Query: 128 SGIVCAALNCFLDFYNVRHLIKVEERPNLILAAEGELGIVAGLQDRVVQVYGGLVYMDFS 187
           SGIVCAALNCFLDFY VRHLIKVE RPNLILAAE ELGIVAGLQDRV QVYGGLVYMDF+
Sbjct: 135 SGIVCAALNCFLDFYKVRHLIKVEVRPNLILAAEKELGIVAGLQDRVAQVYGGLVYMDFN 194

Query: 188 REIMDKKGHGIYIPMDLSLLPPLYLIYAVNPRDSGKVHSKVRQRWLDGDKFIVSSMLEVA 247
           +E MDK GHGIYIPMDLSLLPPLYLIYA NP DSGKVHSKVRQRWLDGD+FIV+SMLEVA
Sbjct: 195 KENMDKLGHGIYIPMDLSLLPPLYLIYAANPSDSGKVHSKVRQRWLDGDEFIVTSMLEVA 254

Query: 248 NIAKEGKTALEEKDYSKFAALMNRNFELRRLMFGDEALGDVNIKMVEVARKVGAASKFTG 307
            IAKEGKTALEEK+YSK AALMNRNF+LRRLMFGD+ALGDVNIKMVEVARKVGAASKFTG
Sbjct: 255 CIAKEGKTALEEKNYSKLAALMNRNFDLRRLMFGDDALGDVNIKMVEVARKVGAASKFTG 314

Query: 308 SGGAVVAFCPEGTSQVKRLEDECHKAGFEMELLEPFPSRLNEFDLKTLR 356
           SGGAVVA+CPEGTSQ K LEDECHKAGF +  LEPFPSRLNE DLK L+
Sbjct: 315 SGGAVVAYCPEGTSQAKLLEDECHKAGFVLIPLEPFPSRLNEADLKILK 363


>Medtr7g117870.1 | L-fucokinase/GDP-L-fucose pyrophosphorylase | HC
           | chr7:48918542-48912166 | 20130731
          Length = 1049

 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 52/231 (22%), Positives = 92/231 (39%), Gaps = 31/231 (13%)

Query: 60  HDLVHFESLRQMVGRVNSDGYYGGVRLLMAICKVFHNYCKEKSIALHDRNFTLSYDTNIP 119
           H+ ++ E    +    + D  +  V+  + +  + H+        L D    +    N+P
Sbjct: 767 HNELYIEDYTSICAPFDGDDPFRLVKCALLVTGIIHDN------ILADMGMHIKTWANVP 820

Query: 120 RQSGLSGSSGIVCAALNCFLDFYNVRHLIKVEERPNLILAAEGELGIVAGLQDRVVQVYG 179
           R SGL  SS +  A +   L   +       E    L+L  E  +G   G QD++  +Y 
Sbjct: 821 RGSGLGTSSILAAAVVKGLLQMIDGDD--STENVARLVLVLEQLMGTGGGWQDQIGGLYP 878

Query: 180 GLVYMDFSREIMDKKGHGIYIPMDLSLLP-------------PLYLIYAVNPRDSGKVHS 226
           G+      +      G    IP+ L ++P              L +++    R + KV  
Sbjct: 879 GI------KCTSSFPG----IPLRLQVVPLLASPQLISELQQRLLVVFTGQVRLAKKVLQ 928

Query: 227 KVRQRWLDGDKFIVSSMLEVANIAKEGKTALEEKDYSKFAALMNRNFELRR 277
           KV  R+L  D  +VSS+  +  +AK G+ AL   D  +   +M   + L +
Sbjct: 929 KVVIRYLRRDNLLVSSIKRLVELAKIGREALMNCDIDELGEIMLEAWRLHQ 979