Miyakogusa Predicted Gene

Lj2g3v0915050.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0915050.1 Non Characterized Hit- tr|C5X400|C5X400_SORBI
Putative uncharacterized protein Sb02g041140
OS=Sorghu,75.41,3e-17,SERINE ENDOPEPTIDASE DEGP2,Serine endopeptidase
DegP2; SERINE PROTEASE FAMILY S1C HTRA-RELATED,NULL;,TC74398.path1.1
         (139 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g004110.1 | DegP protease | HC | chr6:124909-119777 | 2013...   101   2e-22
Medtr4g106730.1 | serine endopeptidase degp2 protein, putative |...    57   5e-09
Medtr1g088980.1 | DegP protease | HC | chr1:39969497-39960538 | ...    53   7e-08

>Medtr6g004110.1 | DegP protease | HC | chr6:124909-119777 |
           20130731
          Length = 550

 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 51/72 (70%), Positives = 60/72 (83%), Gaps = 3/72 (4%)

Query: 70  VRKAHSPIRYRGAGSDVSH--NTAVELALNSVVKVFTVSCSPNYLLPWQNKAQRETMGSG 127
           +R+    I+ R A + ++H  NTAVELA NSVVK+FTVSCSPNYLLPWQNK+QRE+MGSG
Sbjct: 53  IRRERKNIQPRSAAA-LTHTTNTAVELAFNSVVKIFTVSCSPNYLLPWQNKSQRESMGSG 111

Query: 128 FVILGRKILTNA 139
           FVI GRKILTNA
Sbjct: 112 FVIHGRKILTNA 123


>Medtr4g106730.1 | serine endopeptidase degp2 protein, putative | HC
           | chr4:44048692-44043150 | 20130731
          Length = 590

 Score = 57.0 bits (136), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/51 (50%), Positives = 36/51 (70%)

Query: 89  NTAVELALNSVVKVFTVSCSPNYLLPWQNKAQRETMGSGFVILGRKILTNA 139
           +T V  +++SVVKVF V   PN+ LPWQ K Q  +  +GFVI G+++LTNA
Sbjct: 120 STRVLPSMDSVVKVFCVHTEPNFSLPWQRKRQYSSSSTGFVISGKRVLTNA 170


>Medtr1g088980.1 | DegP protease | HC | chr1:39969497-39960538 |
           20130731
          Length = 596

 Score = 53.1 bits (126), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 23/44 (52%), Positives = 32/44 (72%)

Query: 96  LNSVVKVFTVSCSPNYLLPWQNKAQRETMGSGFVILGRKILTNA 139
           LN+VVKV+    +P+Y LPWQ + Q  + GS F+I G+K+LTNA
Sbjct: 102 LNAVVKVYCTHTAPDYSLPWQKQRQFTSTGSAFMIGGKKLLTNA 145