Miyakogusa Predicted Gene

Lj2g3v0914840.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0914840.1 Non Characterized Hit- tr|I1J4A0|I1J4A0_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,73.35,0,CemA,Chloroplast envelope membrane protein, CemA;
seg,NULL; coiled-coil,NULL,CUFF.35701.1
         (431 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g093210.1 | CemA-like proton extrusion protein | HC | chr6...   275   5e-74

>Medtr6g093210.1 | CemA-like proton extrusion protein | HC |
           chr6:35213273-35208973 | 20130731
          Length = 383

 Score =  275 bits (704), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 159/295 (53%), Positives = 190/295 (64%), Gaps = 8/295 (2%)

Query: 45  RRFTRFVSKAEHXXXXXXXXXXXXXXXXEDDGNWLGLK---XXXXXXXXXXXXXXXVSGD 101
           +RFT F+SKA++                +DDGNWLGL+                  +S +
Sbjct: 46  QRFTTFISKAKNHKNKKNSTTWWQKFFQQDDGNWLGLREDDMVEEDVEFEVEEEQELSEN 105

Query: 102 AKFEAWKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ-GIKDYR 160
            KFEAWKQ                                            + G+KDYR
Sbjct: 106 EKFEAWKQRAEAIIDIREAQEDRKNQDHRKWEDWLLEDEDVSSSSSSSSSSWESGMKDYR 165

Query: 161 EEKVLED--VAGEKGLVQSVRSYLFGRE--EDDDDMLYEDRVFQYASSNSAKFLAVLIII 216
           EE   ED       G+VQSV+  +FGRE  ++DDDMLYEDRVF YASSNSAKFL VLI+I
Sbjct: 166 EELRGEDDDFNENNGVVQSVKYLIFGRENGDNDDDMLYEDRVFNYASSNSAKFLGVLIVI 225

Query: 217 PWAIDFVVHDYVLMPFLDRYVKTVPLAAQMLDVRRGQKLRIVDELKIERGRFQLEVEIGK 276
           PWA+DF+VHDY+LMPFLDRYVKTVPLAAQMLDVRR QKL +++ELKI++ RF+LEVEIGK
Sbjct: 226 PWAMDFLVHDYLLMPFLDRYVKTVPLAAQMLDVRRYQKLEMIEELKIDKRRFELEVEIGK 285

Query: 277 SPPLSDDELWLELRHKALDLRDEWRLENRSAFANIWSDMVYGISLFILLYFNKNK 331
           SPPLSD+E+W ELR+ AL+LRDEWRLENR AFANIWSD V+GISLFILLYFNK+K
Sbjct: 286 SPPLSDNEVWWELRNNALELRDEWRLENRRAFANIWSDTVFGISLFILLYFNKSK 340