Miyakogusa Predicted Gene

Lj2g3v0914620.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0914620.1 tr|A9T8L9|A9T8L9_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_141946,36.89,8e-17,seg,NULL; FAMILY NOT
NAMED,NULL,CUFF.35704.1
         (480 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g093150.1 | microtubule-associated TORTIFOLIA-like protein...   637   0.0  
Medtr6g093150.2 | microtubule-associated TORTIFOLIA-like protein...   635   0.0  
Medtr3g050060.2 | microtubule-associated TORTIFOLIA-like protein...    64   4e-10
Medtr3g050060.1 | microtubule-associated TORTIFOLIA-like protein...    64   4e-10

>Medtr6g093150.1 | microtubule-associated TORTIFOLIA-like protein |
           HC | chr6:35169731-35173672 | 20130731
          Length = 816

 Score =  637 bits (1642), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/484 (66%), Positives = 370/484 (76%), Gaps = 13/484 (2%)

Query: 1   MKSSMGRIPLSARKGCQNYVGNPHNLKPDDWHVEIAVPRIRSTAEFQNEESDCSSVSKPM 60
           MKS+ GRIPLS RK CQN VG+  + K DDWHVE+AVPR  S  EF  EE + SSV+KP+
Sbjct: 336 MKSTTGRIPLSVRKACQNDVGHLRHPKTDDWHVEVAVPRTHSVVEFHTEEFEASSVTKPL 395

Query: 61  ETMSADVTSLQDVGYEYEPIDDKQECSSVSNLTTDNYDTKFLTTQDCCINNELQKPIARS 120
            TMSADVTS+Q VGYEY P+DDKQECSSVSN     Y+TKFLT+ DC +NN  QKP  RS
Sbjct: 396 ITMSADVTSMQGVGYEYGPMDDKQECSSVSN-----YETKFLTSHDCFVNNGPQKPNGRS 450

Query: 121 QRFGEEISCNEQIYSKKMQHPRSSDSTVTVSNPQTTHECCAQMANEMICIQNQLSDMEIK 180
           QR  E ISCNEQI S KMQ P+SSDSTVT S+PQ TH+CC Q ANEM CI+NQLSD+EIK
Sbjct: 451 QRLDEGISCNEQIDSIKMQDPKSSDSTVTESSPQITHQCCLQRANEMTCIRNQLSDIEIK 510

Query: 181 QANTMHQLQMSITGIVDALSTIQSRMLSLEYAVDRLNQESLQGGRHSYSENSRLVRQSQN 240
           Q N MHQLQ+  TGI+DALSTIQSRML LE  VDRL++ESL+GGRHS+SENS+ VRQSQN
Sbjct: 511 QENMMHQLQIFTTGIMDALSTIQSRMLGLENVVDRLSRESLKGGRHSFSENSKFVRQSQN 570

Query: 241 VASPKFPICTPRPSAEISNKQSAMS-VKNSESWEKTTFSRSQPRIHVGDSEDLWKSCNVN 299
           VASP+  +CTP+PS+E S KQS +  VK+SES EK +FSRSQPRIH GDS D+ KS  V 
Sbjct: 571 VASPRISVCTPKPSSESSTKQSGLFLVKSSESLEKRSFSRSQPRIHAGDSVDMCKSYKVK 630

Query: 300 VARKFTEKDILNCSGKDTQRTSSAQMRKNDGIFA------ARNSCSESNTNQWKCVKRLI 353
            A K  E D LN  G+D Q T SAQ+RKN  IF+      ARN C ESNTN WKCV RL+
Sbjct: 631 TAPKVRE-DNLNSLGEDRQSTCSAQVRKNGSIFSSAAKTNARNGCPESNTNYWKCVNRLV 689

Query: 354 CEGDLNSAYMEAXXXXXXXXXXXXXXKTGPVIESLSVKTVNVLFSTLASYLVEANYFSTI 413
           CEGDLNSAYMEA              KTGPVIESLS KTVNVL STLA YL+E  +F+TI
Sbjct: 690 CEGDLNSAYMEALCSGDELILIELLNKTGPVIESLSGKTVNVLLSTLAPYLLEGKFFNTI 749

Query: 414 MPWLQQVVDMSTIHGPNCISLSTDAKEQLLSAIQEAVNLNIFSPAERRCVAEIAMKLHHM 473
           +PWLQQVV+MST+HGPNCI+LS + +EQLL AIQE VNLNIFS AE+R  AE+A+KLHH+
Sbjct: 750 IPWLQQVVEMSTVHGPNCIALSIEVEEQLLYAIQEVVNLNIFSHAEKRRAAELAIKLHHI 809

Query: 474 WGKI 477
           W KI
Sbjct: 810 WSKI 813


>Medtr6g093150.2 | microtubule-associated TORTIFOLIA-like protein |
           HC | chr6:35169715-35173662 | 20130731
          Length = 659

 Score =  635 bits (1638), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/484 (66%), Positives = 370/484 (76%), Gaps = 13/484 (2%)

Query: 1   MKSSMGRIPLSARKGCQNYVGNPHNLKPDDWHVEIAVPRIRSTAEFQNEESDCSSVSKPM 60
           MKS+ GRIPLS RK CQN VG+  + K DDWHVE+AVPR  S  EF  EE + SSV+KP+
Sbjct: 179 MKSTTGRIPLSVRKACQNDVGHLRHPKTDDWHVEVAVPRTHSVVEFHTEEFEASSVTKPL 238

Query: 61  ETMSADVTSLQDVGYEYEPIDDKQECSSVSNLTTDNYDTKFLTTQDCCINNELQKPIARS 120
            TMSADVTS+Q VGYEY P+DDKQECSSVSN     Y+TKFLT+ DC +NN  QKP  RS
Sbjct: 239 ITMSADVTSMQGVGYEYGPMDDKQECSSVSN-----YETKFLTSHDCFVNNGPQKPNGRS 293

Query: 121 QRFGEEISCNEQIYSKKMQHPRSSDSTVTVSNPQTTHECCAQMANEMICIQNQLSDMEIK 180
           QR  E ISCNEQI S KMQ P+SSDSTVT S+PQ TH+CC Q ANEM CI+NQLSD+EIK
Sbjct: 294 QRLDEGISCNEQIDSIKMQDPKSSDSTVTESSPQITHQCCLQRANEMTCIRNQLSDIEIK 353

Query: 181 QANTMHQLQMSITGIVDALSTIQSRMLSLEYAVDRLNQESLQGGRHSYSENSRLVRQSQN 240
           Q N MHQLQ+  TGI+DALSTIQSRML LE  VDRL++ESL+GGRHS+SENS+ VRQSQN
Sbjct: 354 QENMMHQLQIFTTGIMDALSTIQSRMLGLENVVDRLSRESLKGGRHSFSENSKFVRQSQN 413

Query: 241 VASPKFPICTPRPSAEISNKQSAMS-VKNSESWEKTTFSRSQPRIHVGDSEDLWKSCNVN 299
           VASP+  +CTP+PS+E S KQS +  VK+SES EK +FSRSQPRIH GDS D+ KS  V 
Sbjct: 414 VASPRISVCTPKPSSESSTKQSGLFLVKSSESLEKRSFSRSQPRIHAGDSVDMCKSYKVK 473

Query: 300 VARKFTEKDILNCSGKDTQRTSSAQMRKNDGIFA------ARNSCSESNTNQWKCVKRLI 353
            A K  E D LN  G+D Q T SAQ+RKN  IF+      ARN C ESNTN WKCV RL+
Sbjct: 474 TAPKVRE-DNLNSLGEDRQSTCSAQVRKNGSIFSSAAKTNARNGCPESNTNYWKCVNRLV 532

Query: 354 CEGDLNSAYMEAXXXXXXXXXXXXXXKTGPVIESLSVKTVNVLFSTLASYLVEANYFSTI 413
           CEGDLNSAYMEA              KTGPVIESLS KTVNVL STLA YL+E  +F+TI
Sbjct: 533 CEGDLNSAYMEALCSGDELILIELLNKTGPVIESLSGKTVNVLLSTLAPYLLEGKFFNTI 592

Query: 414 MPWLQQVVDMSTIHGPNCISLSTDAKEQLLSAIQEAVNLNIFSPAERRCVAEIAMKLHHM 473
           +PWLQQVV+MST+HGPNCI+LS + +EQLL AIQE VNLNIFS AE+R  AE+A+KLHH+
Sbjct: 593 IPWLQQVVEMSTVHGPNCIALSIEVEEQLLYAIQEVVNLNIFSHAEKRRAAELAIKLHHI 652

Query: 474 WGKI 477
           W KI
Sbjct: 653 WSKI 656


>Medtr3g050060.2 | microtubule-associated TORTIFOLIA-like protein |
           HC | chr3:19709809-19717265 | 20130731
          Length = 913

 Score = 63.9 bits (154), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 71/356 (19%), Positives = 144/356 (40%), Gaps = 87/356 (24%)

Query: 167 MICIQNQLSDMEIKQANTMHQLQMSITGIVDALSTIQSRMLSLEYAVDRL---------- 216
           ++ IQ QL+ +E +Q + M+ LQ  + G  D++ T+++R+  LE  V+ +          
Sbjct: 539 LLAIQRQLTQLERQQGHLMNMLQDFMGGSHDSMVTLENRVRGLERIVEDMLQDLSISSGR 598

Query: 217 --------------------NQESLQGGRHSYSENSRLVRQSQNVASPK----------- 245
                               N +  +GG      N R  +   N    +           
Sbjct: 599 RFEGSSGRPSSKYNGFNEYSNSKYGRGGDGRIPFNERFTQTDGNALGMRGRGPSWRSDMP 658

Query: 246 ----FPICTPRPSAEISNKQ----------SAMSVKNSE------SWEKTTFSRSQPRIH 285
               FP      + +IS+++          S  SV  S+      +WEK         I 
Sbjct: 659 EGWDFPGYGASRNGQISSRRAFGGSSVDGRSPKSVHESDQGGSRRAWEKAAMP-----IR 713

Query: 286 VGD---SEDLWKSCNVNVARKFTEKDILNCSGKD--TQRTS-------SAQMRKNDGIFA 333
           +G+   +  +W++     ++     + +  +G+D  T R +       +A+   +D +  
Sbjct: 714 LGEGPSARSVWQA-----SKDEATLEAIRVAGEDNGTSRATRVAVPEMTAEAMADDSVGQ 768

Query: 334 ARNSCSESNTNQWKCVKRLICEGDLNSAYMEAXXXXXXXXXXXXXXKTGPVIESLSVKTV 393
            R++   S +N +  ++     GD++SA+ E               +TGPVI  LS +  
Sbjct: 769 ERDAIWTSWSNAFDALQ----AGDIDSAFAEVLSTGDDRLLVKLMDRTGPVINELSSEIA 824

Query: 394 NVLFSTLASYLVEANYFSTIMPWLQQVVDMSTIHGPNCISLSTDAKEQLLSAIQEA 449
             +   ++ +L+E + F+  + W+QQ+V++   +GP+   +  + KE LL  + +A
Sbjct: 825 CEILYAISQFLLEQDLFNICLSWIQQLVEVLFENGPDTFGVPMEVKEDLLRNLHDA 880


>Medtr3g050060.1 | microtubule-associated TORTIFOLIA-like protein |
           HC | chr3:19709809-19717288 | 20130731
          Length = 924

 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 71/356 (19%), Positives = 144/356 (40%), Gaps = 87/356 (24%)

Query: 167 MICIQNQLSDMEIKQANTMHQLQMSITGIVDALSTIQSRMLSLEYAVDRL---------- 216
           ++ IQ QL+ +E +Q + M+ LQ  + G  D++ T+++R+  LE  V+ +          
Sbjct: 550 LLAIQRQLTQLERQQGHLMNMLQDFMGGSHDSMVTLENRVRGLERIVEDMLQDLSISSGR 609

Query: 217 --------------------NQESLQGGRHSYSENSRLVRQSQNVASPK----------- 245
                               N +  +GG      N R  +   N    +           
Sbjct: 610 RFEGSSGRPSSKYNGFNEYSNSKYGRGGDGRIPFNERFTQTDGNALGMRGRGPSWRSDMP 669

Query: 246 ----FPICTPRPSAEISNKQ----------SAMSVKNSE------SWEKTTFSRSQPRIH 285
               FP      + +IS+++          S  SV  S+      +WEK         I 
Sbjct: 670 EGWDFPGYGASRNGQISSRRAFGGSSVDGRSPKSVHESDQGGSRRAWEKAAMP-----IR 724

Query: 286 VGD---SEDLWKSCNVNVARKFTEKDILNCSGKD--TQRTS-------SAQMRKNDGIFA 333
           +G+   +  +W++     ++     + +  +G+D  T R +       +A+   +D +  
Sbjct: 725 LGEGPSARSVWQA-----SKDEATLEAIRVAGEDNGTSRATRVAVPEMTAEAMADDSVGQ 779

Query: 334 ARNSCSESNTNQWKCVKRLICEGDLNSAYMEAXXXXXXXXXXXXXXKTGPVIESLSVKTV 393
            R++   S +N +  ++     GD++SA+ E               +TGPVI  LS +  
Sbjct: 780 ERDAIWTSWSNAFDALQ----AGDIDSAFAEVLSTGDDRLLVKLMDRTGPVINELSSEIA 835

Query: 394 NVLFSTLASYLVEANYFSTIMPWLQQVVDMSTIHGPNCISLSTDAKEQLLSAIQEA 449
             +   ++ +L+E + F+  + W+QQ+V++   +GP+   +  + KE LL  + +A
Sbjct: 836 CEILYAISQFLLEQDLFNICLSWIQQLVEVLFENGPDTFGVPMEVKEDLLRNLHDA 891