Miyakogusa Predicted Gene

Lj2g3v0910610.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0910610.1 CUFF.35641.1
         (240 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g091780.1 | DUF3456 domain protein | HC | chr6:34593151-34...   338   2e-93
Medtr6g090810.1 | hypothetical protein | HC | chr6:34619879-3461...   296   2e-80
Medtr6g092180.1 | hypothetical protein | HC | chr6:34747316-3474...   276   1e-74
Medtr6g092150.1 | hypothetical protein | HC | chr6:34735482-3473...   224   5e-59
Medtr6g091840.1 | hypothetical protein | LC | chr6:34608564-3460...    75   7e-14
Medtr6g091870.1 | hypothetical protein | HC | chr6:34613477-3461...    52   6e-07

>Medtr6g091780.1 | DUF3456 domain protein | HC |
           chr6:34593151-34588458 | 20130731
          Length = 301

 Score =  338 bits (868), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 167/208 (80%), Positives = 179/208 (86%), Gaps = 3/208 (1%)

Query: 13  AENVCNLKKVEADWILRIDIVEKGDRLELEEHDSEGQCNSECKTIERACQEVIGYSDTDV 72
           AENVCNLKKVEADWILRIDIVEK DRLELEEHDSEGQCNSECKT+ERACQEV+GYSDTDV
Sbjct: 76  AENVCNLKKVEADWILRIDIVEKADRLELEEHDSEGQCNSECKTVERACQEVMGYSDTDV 135

Query: 73  AEYLYKSKSDIDSLFNYLCKDLTKACSTKPPPVPKDRTPGEPFVAKSSKEAEMEKLLKSM 132
           AEYLY SK DIDSL NYLCKDL+KAC+TKPPPVPKDRTPGEPFVAKSSKEAEMEKLLKSM
Sbjct: 136 AEYLYSSKPDIDSLTNYLCKDLSKACNTKPPPVPKDRTPGEPFVAKSSKEAEMEKLLKSM 195

Query: 133 EGMPGAPGMKMYSRDDLMNMKNFGGXX--XXXXXXXXXXQASFPSKLGKVLRDKESGKSD 190
           EGMPGAPGMKMYSRDDLM  KNFG               +A FPSKLGK+L+ KE+ K D
Sbjct: 196 EGMPGAPGMKMYSRDDLMK-KNFGAENEDDDEDEDEEEDEADFPSKLGKILKSKENEKGD 254

Query: 191 WKQLIKKGITDTSMTLKKHANRISNHVQ 218
           WKQ I+KGI DTS TLKKHA ++SNH+Q
Sbjct: 255 WKQKIRKGIVDTSTTLKKHATKVSNHIQ 282


>Medtr6g090810.1 | hypothetical protein | HC |
           chr6:34619879-34617130 | 20130731
          Length = 286

 Score =  296 bits (757), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 152/208 (73%), Positives = 163/208 (78%), Gaps = 18/208 (8%)

Query: 13  AENVCNLKKVEADWILRIDIVEKGDRLELEEHDSEGQCNSECKTIERACQEVIGYSDTDV 72
           AENVCNLKKVEADWILRIDIVEK DRLE               T+ERACQEV+GYSDTDV
Sbjct: 76  AENVCNLKKVEADWILRIDIVEKADRLE---------------TVERACQEVLGYSDTDV 120

Query: 73  AEYLYKSKSDIDSLFNYLCKDLTKACSTKPPPVPKDRTPGEPFVAKSSKEAEMEKLLKSM 132
           AEYLY SK DIDSL NYLCKDL+KAC+TKPPPVPKDRTPGEPFVAKSSKEAEMEKLLKSM
Sbjct: 121 AEYLYSSKPDIDSLTNYLCKDLSKACNTKPPPVPKDRTPGEPFVAKSSKEAEMEKLLKSM 180

Query: 133 EGMPGAPGMKMYSRDDLMNMKNFGG--XXXXXXXXXXXXQASFPSKLGKVLRDKESGKSD 190
           EGMPGAPGMKMYSRDDLM  KNFG               +A FPSKLGKVL+ KE+ K D
Sbjct: 181 EGMPGAPGMKMYSRDDLMK-KNFGAENEDDDEDEDEEEDEADFPSKLGKVLKSKENEKGD 239

Query: 191 WKQLIKKGITDTSMTLKKHANRISNHVQ 218
           WKQ I+KGI DT  TLKKHA ++SNH+Q
Sbjct: 240 WKQKIRKGIVDTGTTLKKHATKVSNHIQ 267


>Medtr6g092180.1 | hypothetical protein | HC |
           chr6:34747316-34744567 | 20130731
          Length = 278

 Score =  276 bits (706), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 145/208 (69%), Positives = 155/208 (74%), Gaps = 26/208 (12%)

Query: 13  AENVCNLKKVEADWILRIDIVEKGDRLELEEHDSEGQCNSECKTIERACQEVIGYSDTDV 72
           AENVCNLKKVEADWILRIDIVEK DRLE                       V+GYSDTDV
Sbjct: 76  AENVCNLKKVEADWILRIDIVEKADRLE-----------------------VLGYSDTDV 112

Query: 73  AEYLYKSKSDIDSLFNYLCKDLTKACSTKPPPVPKDRTPGEPFVAKSSKEAEMEKLLKSM 132
           AEYLY SK DIDSL NYLCKDL+KAC+TKPPPVPKDRTPGEPFVAKSSKEAEMEKLLKSM
Sbjct: 113 AEYLYSSKPDIDSLTNYLCKDLSKACNTKPPPVPKDRTPGEPFVAKSSKEAEMEKLLKSM 172

Query: 133 EGMPGAPGMKMYSRDDLMNMKNFGG--XXXXXXXXXXXXQASFPSKLGKVLRDKESGKSD 190
           EGMPGAPGMKMYSRDDLM  KNFG               +A FPSKLGKVL+ KE+ K D
Sbjct: 173 EGMPGAPGMKMYSRDDLMK-KNFGAENEDDDEDEDEEEDEADFPSKLGKVLKSKENEKGD 231

Query: 191 WKQLIKKGITDTSMTLKKHANRISNHVQ 218
           WKQ I+KGI DT  TLKKHA ++SNH+Q
Sbjct: 232 WKQKIRKGIVDTGTTLKKHATKVSNHIQ 259


>Medtr6g092150.1 | hypothetical protein | HC |
           chr6:34735482-34731243 | 20130731
          Length = 323

 Score =  224 bits (571), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 131/236 (55%), Positives = 140/236 (59%), Gaps = 68/236 (28%)

Query: 13  AENVCNLKKVEADWILRIDIVEKGDRLELEE-HDSEGQCNSECKTIERACQEVIGYSDTD 71
           AENVCNLKKVEADWILRIDIVEK DRLELEE HDSEGQCNSECKT+ERACQEV+GYSDTD
Sbjct: 107 AENVCNLKKVEADWILRIDIVEKADRLELEEEHDSEGQCNSECKTVERACQEVMGYSDTD 166

Query: 72  VAEYLYKSKSDIDSLFNYLCKDLTKACSTKPPPVPK---------------------DRT 110
           VAEYLY  K DIDSL NYLCKDL+K+C+TKPPPVPK                      RT
Sbjct: 167 VAEYLYSCKPDIDSLTNYLCKDLSKSCNTKPPPVPKGKFIRVSLLIIINLRNTVPRQTRT 226

Query: 111 PGEPFVAKSSKEAEMEKLLKSMEGMPGAPGMKMYSRDDLMNMKNFGG--------XXXXX 162
           PGEPFVAKSS EAEMEKLLKSME                    NFG              
Sbjct: 227 PGEPFVAKSSNEAEMEKLLKSME--------------------NFGAENEDDDEDEDEDE 266

Query: 163 XXXXXXXQASFPSKLGKVLRDKESGKSDWKQLIKKGITDTSMTLKKHANRISNHVQ 218
                  +A FPSKL             W         DTS  LKKHA ++SNH+Q
Sbjct: 267 DEDEDEDEADFPSKL-----------ELWS-------VDTSTALKKHATKVSNHIQ 304


>Medtr6g091840.1 | hypothetical protein | LC |
           chr6:34608564-34607901 | 20130731
          Length = 117

 Score = 74.7 bits (182), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 47/97 (48%), Positives = 53/97 (54%), Gaps = 22/97 (22%)

Query: 107 KDRTPGEPFVAKSSKEAEMEKLLKSMEGMPGAPGMKMYSRDDLMNMKNFGGXXXXXXXXX 166
           + RTPGEPFVAKSS EAEMEKL+KSME                    NFG          
Sbjct: 17  RTRTPGEPFVAKSSNEAEMEKLVKSME--------------------NFGAENEDDNEDE 56

Query: 167 XXXQAS--FPSKLGKVLRDKESGKSDWKQLIKKGITD 201
              +    FPSKLGKVLR KE+ K DWKQ I+KGI +
Sbjct: 57  DEDEDEADFPSKLGKVLRSKENEKGDWKQKIRKGIVE 93


>Medtr6g091870.1 | hypothetical protein | HC |
           chr6:34613477-34612920 | 20130731
          Length = 82

 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/29 (82%), Positives = 25/29 (86%)

Query: 107 KDRTPGEPFVAKSSKEAEMEKLLKSMEGM 135
           + RTPGEPFVAKSS EAEMEKLLKSME  
Sbjct: 17  RTRTPGEPFVAKSSNEAEMEKLLKSMENF 45