Miyakogusa Predicted Gene

Lj2g3v0894320.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0894320.1 Non Characterized Hit- tr|D8TA08|D8TA08_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,36.09,5e-18,seg,NULL; no description,Six-bladed
beta-propeller, TolB-like; NHL REPEAT-CONTAINING PROTEIN,NULL;
F,CUFF.35609.1
         (257 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g063700.1 | plant/T23E23-13 protein, putative | HC | chr8:...   342   2e-94
Medtr5g034750.1 | NHL repeat protein | HC | chr5:15072581-150770...   121   6e-28
Medtr8g063760.1 | NHL repeat protein | HC | chr8:26718504-267142...   120   1e-27
Medtr2g075860.1 | NHL repeat protein | HC | chr2:31740677-317353...   117   1e-26
Medtr6g007720.1 | NHL repeat protein | HC | chr6:1850293-1854343...   111   8e-25
Medtr8g058630.1 | NHL repeat protein | HC | chr8:20081350-200803...   100   9e-22

>Medtr8g063700.1 | plant/T23E23-13 protein, putative | HC |
           chr8:26697994-26701680 | 20130731
          Length = 384

 Score =  342 bits (878), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 162/213 (76%), Positives = 179/213 (84%)

Query: 25  NVHGKVVIPEDGYTVTTVLDGHKHHINPYSVLQRPGSSDLIVLDSVNSAFYTVQFPISQE 84
           +V   +VIPE+GYT+TT+LDGHK HINP+S+LQRP SSDLIVLDS NS FYTVQ PISQE
Sbjct: 22  HVQATLVIPEEGYTITTILDGHKLHINPFSILQRPISSDLIVLDSTNSTFYTVQLPISQE 81

Query: 85  SVFTKFSGNGSPGYSDGDVGLAQFDKPRSFAFDLRGNMYVADRSNQAIRKITANGVTTIA 144
           SVF +FSGNGSPGY DGDVGLA+FDKPRSFA D RGN+YVADR N+ IRKI+ NGVTTIA
Sbjct: 82  SVFKRFSGNGSPGYEDGDVGLARFDKPRSFAVDFRGNVYVADRVNKVIRKISTNGVTTIA 141

Query: 145 GGFSEKSSRQDGPANNASLSNDFELSFIPGLCALLVSDHMHQLVYQINLNEQDCTLGSKS 204
           GG SEKSS +DGPA NAS SNDFEL+FIP LCALLVSDHMHQLV+QINL E+DCTLGSKS
Sbjct: 142 GGSSEKSSIKDGPAQNASFSNDFELTFIPALCALLVSDHMHQLVHQINLKEEDCTLGSKS 201

Query: 205 GLGAVMTWTXXXXXXXXXXXVIGIAVRPYIIPH 237
            LGAVMTWT           VIGI +RPYIIPH
Sbjct: 202 ALGAVMTWTLGLGLSCILGLVIGIVIRPYIIPH 234


>Medtr5g034750.1 | NHL repeat protein | HC | chr5:15072581-15077047
           | 20130731
          Length = 560

 Score =  121 bits (304), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 77/191 (40%), Positives = 106/191 (55%), Gaps = 7/191 (3%)

Query: 26  VHGKVVIP-EDGYTVTTVLDGHKHHINPYSVLQRPGSSDLIVLDSVNSAFYTVQFPISQE 84
           + GK ++  E GY V TV DG K  I PY+V +   + +L++LDS NS  Y +   +S  
Sbjct: 61  IAGKSMMKFESGYNVETVFDGSKLGIEPYAV-EVLSNGELLILDSENSNIYKISSSLSLY 119

Query: 85  S--VFTKFSGNGSPGYSDGDVGLAQFDKPRSFAFDLRGNMYVADRSNQAIRKITANGVTT 142
           S       S  G  G+ DG +  A+ + P+    D RGN+YVAD  N AIRKI+ +GVTT
Sbjct: 120 SRPKLVAGSAEGYSGHVDGKLREARMNHPKGITVDDRGNIYVADIMNMAIRKISDSGVTT 179

Query: 143 IAGG-FSEKSSRQDGPANNASLSNDFELSFIPGLCALLVSDHMHQLVYQINLNEQDCTLG 201
           IAGG  S      DGP+  A  SNDF++ ++   C+LLV D  +Q + +I L   DC   
Sbjct: 180 IAGGKLSRGGGHVDGPSEEAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLRFDDCAYQ 239

Query: 202 SKSG--LGAVM 210
            +SG  LG  M
Sbjct: 240 YESGFPLGIAM 250


>Medtr8g063760.1 | NHL repeat protein | HC | chr8:26718504-26714203
           | 20130731
          Length = 521

 Score =  120 bits (302), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/182 (40%), Positives = 103/182 (56%), Gaps = 6/182 (3%)

Query: 34  EDGYTVTTVLDGHKHHINPYSVLQRPGSSDLIVLDSVNSAFYTVQFPISQES--VFTKFS 91
           E GY V TV DG K  I PY+V +   + +L++LDS NS  Y +   +S  S       S
Sbjct: 73  ESGYNVETVFDGSKLGIEPYAV-EVLHNGELLILDSANSNLYRISSSLSLYSRPKLVAGS 131

Query: 92  GNGSPGYSDGDVGLAQFDKPRSFAFDLRGNMYVADRSNQAIRKITANGVTTIAGG-FSEK 150
             G  G+ DG +  A+ + P+    D RGN+YVAD +N AIRKI+ +GVTTIAGG +S  
Sbjct: 132 AEGYSGHVDGRLREARMNHPKGITVDDRGNIYVADTANMAIRKISDSGVTTIAGGKWSRG 191

Query: 151 SSRQDGPANNASLSNDFELSFIPGLCALLVSDHMHQLVYQINLNEQDCT--LGSKSGLGA 208
               DGP+  A  S+DF++ ++   C+LLV D  +Q + +I L+  DC    GS   LG 
Sbjct: 192 GGHVDGPSEEAKFSDDFDVVYVGSSCSLLVVDRGNQAIREIQLHFDDCAYRYGSDFPLGI 251

Query: 209 VM 210
            M
Sbjct: 252 AM 253


>Medtr2g075860.1 | NHL repeat protein | HC | chr2:31740677-31735332
           | 20130731
          Length = 493

 Score =  117 bits (292), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 103/179 (57%), Gaps = 2/179 (1%)

Query: 28  GKVVIPEDGYTVTTVLDGHKHHINPYSVLQRPGSSDLIVLDSVNSAFYTVQFPISQESVF 87
           G V+  E+GY V TV++G++  + PY +       +L  +D +NS    +  P+SQ S  
Sbjct: 60  GNVLQFENGYVVETVVEGNEIGVIPYRIRVSEEDGELFAVDEINSNIVRITPPLSQYSRG 119

Query: 88  TKFSGN--GSPGYSDGDVGLAQFDKPRSFAFDLRGNMYVADRSNQAIRKITANGVTTIAG 145
              +G+  G   + DG    A+F+ P+    D +GN+YVAD  N AIRKI   GVTTIAG
Sbjct: 120 RLVAGSFQGYTDHVDGKPSDARFNHPKGITMDDKGNVYVADTQNLAIRKIGDAGVTTIAG 179

Query: 146 GFSEKSSRQDGPANNASLSNDFELSFIPGLCALLVSDHMHQLVYQINLNEQDCTLGSKS 204
           G S  +  +DGP+ +A  SNDF++ ++   C+LLV D  +  + +I L+++DC   S S
Sbjct: 180 GKSNVAGYRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRKIILDQEDCDYQSSS 238


>Medtr6g007720.1 | NHL repeat protein | HC | chr6:1850293-1854343 |
           20130731
          Length = 562

 Score =  111 bits (277), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 68/169 (40%), Positives = 95/169 (56%), Gaps = 5/169 (2%)

Query: 34  EDGYTVTTVLDGHKHHINPYSVLQRPGSSDLIVLDSVNSAFYTVQFPISQESVFTKFSGN 93
           E GY V T+ DG K  I P+S+ +     + +VLDS NS  Y +  P+S+ S     +G+
Sbjct: 70  ESGYNVETIFDGSKLGIEPHSI-EISQDGEYLVLDSENSNIYKISSPMSRYSKPKLLAGS 128

Query: 94  --GSPGYSDGDVGLAQFDKPRSFAFDLRGNMYVADRSNQAIRKITANGVTTIAGGFSEKS 151
             G  G+ DG    A+ + P+    D  GN+Y+AD  N AIRKI+  GVTTIAGG     
Sbjct: 129 SEGYIGHIDGRSRDARLNHPKGLTVDDSGNIYIADTLNMAIRKISDEGVTTIAGGGKRGQ 188

Query: 152 SRQ--DGPANNASLSNDFELSFIPGLCALLVSDHMHQLVYQINLNEQDC 198
                DGP+ +A  SNDF+L +    C+LLV D  +Q + +I LN+ DC
Sbjct: 189 LGGHVDGPSEDAKFSNDFDLIYARSSCSLLVDDRGNQAIREIQLNQDDC 237


>Medtr8g058630.1 | NHL repeat protein | HC | chr8:20081350-20080362
           | 20130731
          Length = 150

 Score =  100 bits (250), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 53/111 (47%), Positives = 70/111 (63%)

Query: 94  GSPGYSDGDVGLAQFDKPRSFAFDLRGNMYVADRSNQAIRKITANGVTTIAGGFSEKSSR 153
           G  G+ DG +  A+F  P+  A D +GN+YVAD  N AIRKI   GVTTIAGG S  +  
Sbjct: 24  GRTGHVDGKLSDARFHYPKGIALDDKGNVYVADTQNMAIRKIGDAGVTTIAGGKSNVAGY 83

Query: 154 QDGPANNASLSNDFELSFIPGLCALLVSDHMHQLVYQINLNEQDCTLGSKS 204
           +DGP  +A LSNDF++ +I   C+LLV D  +  + QI LN++DC   S S
Sbjct: 84  RDGPGEDAKLSNDFDVVYIRPTCSLLVIDRGNAALRQIFLNQEDCNYQSSS 134